RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 SLC17A8Q8NDX2 589 aa13.6□□□□□ -0.23
CDH3-206ENST00000567674 CNKSR2Q8WXI2 1034 aa13.6□□□□□ -0.23
CDH3-206ENST00000567674 PARK7Q99497 189 aaKnown RBP13.6□□□□□ -0.23
CDH3-206ENST00000567674 LRRCC1Q9C099 1032 aa13.6□□□□□ -0.23
CDH3-206ENST00000567674 EHD4Q9H223 541 aa13.6□□□□□ -0.23
CDH3-206ENST00000567674 R3HDMLQ9H3Y0 253 aa13.6□□□□□ -0.23
CDH3-206ENST00000567674 AS3MTQ9HBK9 375 aa13.6□□□□□ -0.23
CDH3-206ENST00000567674 MAST2Q6P0Q8 1798 aa13.6□□□□□ -0.23
CDH3-206ENST00000567674 POTEFA5A3E0 1075 aa13.59□□□□□ -0.23
CDH3-206ENST00000567674 HLA-DOAP06340 250 aa13.59□□□□□ -0.23
CDH3-206ENST00000567674 CYP7A1P22680 504 aa13.59□□□□□ -0.23
CDH3-206ENST00000567674 HOXD10P28358 340 aa13.59□□□□□ -0.23
CDH3-206ENST00000567674 PABPC4Q13310 644 aaKnown RBP eCLIP13.59□□□□□ -0.23
CDH3-206ENST00000567674 MOGSQ13724 837 aa13.59□□□□□ -0.23
CDH3-206ENST00000567674 SH3D19Q5HYK7 790 aa13.59□□□□□ -0.23
CDH3-206ENST00000567674 NBPF11Q86T75 865 aa13.59□□□□□ -0.23
CDH3-206ENST00000567674 TTC6Q86TZ1 520 aa13.59□□□□□ -0.23
CDH3-206ENST00000567674 SH3RF3Q8TEJ3 882 aaPredicted RBP13.59□□□□□ -0.23
CDH3-206ENST00000567674 WDR18Q9BV38 432 aa13.59□□□□□ -0.23
CDH3-206ENST00000567674 DCTPP1Q9H773 170 aa13.59□□□□□ -0.23
CDH3-206ENST00000567674 SNRKQ9NRH2 765 aa13.59□□□□□ -0.23
CDH3-206ENST00000567674 AATFQ9NY61 560 aaKnown RBP eCLIP13.59□□□□□ -0.23
CDH3-206ENST00000567674 TLR7Q9NYK1 1049 aaKnown RBP13.59□□□□□ -0.23
CDH3-206ENST00000567674 PTPN22Q9Y2R2 807 aa13.59□□□□□ -0.23
CDH3-206ENST00000567674 ZHX2Q9Y6X8 837 aa13.59□□□□□ -0.23
CDH3-206ENST00000567674 AK9Q5TCS8 1911 aa13.58□□□□□ -0.23
CDH3-206ENST00000567674 DOCK2Q92608 1830 aa13.58□□□□□ -0.24
CDH3-206ENST00000567674 USP17L5A8MUK1 530 aa13.58□□□□□ -0.24
CDH3-206ENST00000567674 C19orf81C9J6K1 198 aa13.58□□□□□ -0.24
CDH3-206ENST00000567674 PDHXO00330 501 aa13.58□□□□□ -0.24
CDH3-206ENST00000567674 IDH1O75874 414 aaKnown RBP13.58□□□□□ -0.24
CDH3-206ENST00000567674 ZSCAN25Q6NSZ9 544 aa13.58□□□□□ -0.24
CDH3-206ENST00000567674 TICAM2Q86XR7 235 aa13.58□□□□□ -0.24
CDH3-206ENST00000567674 TGFBRAP1Q8WUH2 860 aa13.58□□□□□ -0.24
CDH3-206ENST00000567674 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.58□□□□□ -0.24
CDH3-206ENST00000567674 PIH1D3Q9NQM4 214 aaKnown RBP13.58□□□□□ -0.24
CDH3-206ENST00000567674 PNMA3Q9UL41 463 aa13.58□□□□□ -0.24
CDH3-206ENST00000567674 TRIM17Q9Y577 477 aa13.58□□□□□ -0.24
CDH3-206ENST00000567674 FLT1P17948 1338 aa13.58□□□□□ -0.24
CDH3-206ENST00000567674 LACTBP83111 547 aaPredicted RBP13.57□□□□□ -0.24
CDH3-206ENST00000567674 ZNF280CQ8ND82 737 aa13.57□□□□□ -0.24
CDH3-206ENST00000567674 ARMC5Q96C12 935 aa13.57□□□□□ -0.24
CDH3-206ENST00000567674 HAUS7Q99871 368 aa13.57□□□□□ -0.24
CDH3-206ENST00000567674 IL1RAPL2Q9NP60 686 aa13.57□□□□□ -0.24
CDH3-206ENST00000567674 AGTPBP1Q9UPW5 1226 aa13.57□□□□□ -0.24
CDH3-206ENST00000567674 HTTP42858 3142 aa13.57□□□□□ -0.24
CDH3-206ENST00000567674 SLC9C2Q5TAH2 1124 aa13.56□□□□□ -0.24
CDH3-206ENST00000567674 GPAT2Q6NUI2 795 aa13.56□□□□□ -0.24
CDH3-206ENST00000567674 TATDN1Q6P1N9 297 aa13.56□□□□□ -0.24
CDH3-206ENST00000567674 ADGRA1Q86SQ6 560 aa13.56□□□□□ -0.24
CDH3-206ENST00000567674 MAGEB6Q8N7X4 407 aa13.56□□□□□ -0.24
CDH3-206ENST00000567674 GPATCH3Q96I76 525 aa13.56□□□□□ -0.24
CDH3-206ENST00000567674 TRIM34Q9BYJ4 488 aa13.56□□□□□ -0.24
CDH3-206ENST00000567674 ATP8A2Q9NTI2 1148 aa13.56□□□□□ -0.24
CDH3-206ENST00000567674 ADGRA2Q96PE1 1338 aa13.56□□□□□ -0.24
CDH3-206ENST00000567674 RBBP6Q7Z6E9 1792 aaKnown RBP13.55□□□□□ -0.24
CDH3-206ENST00000567674 USP5P45974 858 aa13.55□□□□□ -0.24
CDH3-206ENST00000567674 GCLCP48506 637 aaPredicted RBP13.55□□□□□ -0.24
CDH3-206ENST00000567674 UBE3CQ15386 1083 aa13.55□□□□□ -0.24
CDH3-206ENST00000567674 LRRFIP1Q32MZ4 808 aaKnown RBP13.55□□□□□ -0.24
CDH3-206ENST00000567674 CRACR2BQ8N4Y2 399 aaPredicted RBP13.55□□□□□ -0.24
CDH3-206ENST00000567674 GTF3C2Q8WUA4 911 aaPredicted RBP13.55□□□□□ -0.24
CDH3-206ENST00000567674 RIOK1Q9BRS2 568 aaKnown RBP13.55□□□□□ -0.24
CDH3-206ENST00000567674 CRNKL1Q9BZJ0 848 aaKnown RBP13.55□□□□□ -0.24
CDH3-206ENST00000567674 PAG1Q9NWQ8 432 aa13.55□□□□□ -0.24
CDH3-206ENST00000567674 SERPINB13Q9UIV8 391 aa13.55□□□□□ -0.24
CDH3-206ENST00000567674 SZT2Q5T011 3432 aa13.55□□□□□ -0.24
CDH3-206ENST00000567674 MAGEB6P1A0A0J9YX57 407 aa13.54□□□□□ -0.24
CDH3-206ENST00000567674 BCRP11274 1271 aa13.54□□□□□ -0.24
CDH3-206ENST00000567674 HOXA7P31268 230 aaPredicted RBP13.54□□□□□ -0.24
CDH3-206ENST00000567674 CD99L2Q8TCZ2 262 aa13.54□□□□□ -0.24
CDH3-206ENST00000567674 ANTXR1Q9H6X2 564 aa13.54□□□□□ -0.24
CDH3-206ENST00000567674 ECHDC1Q9NTX5 307 aa13.54□□□□□ -0.24
CDH3-206ENST00000567674 FOCADQ5VW36 1801 aa13.54□□□□□ -0.24
CDH3-206ENST00000567674 DOCK1Q14185 1865 aa13.53□□□□□ -0.24
CDH3-206ENST00000567674 TCRBV5S4A2TA0A5A2 114 aa13.53□□□□□ -0.24
CDH3-206ENST00000567674 ZFYP08048 801 aaPredicted RBP13.53□□□□□ -0.24
CDH3-206ENST00000567674 PDE6AP16499 860 aa13.53□□□□□ -0.24
CDH3-206ENST00000567674 C20orf194Q5TEA3 1177 aa13.53□□□□□ -0.24
CDH3-206ENST00000567674 MAPKAPK5Q8IW41 473 aa13.53□□□□□ -0.24
CDH3-206ENST00000567674 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.53□□□□□ -0.24
CDH3-206ENST00000567674 SWAP70Q9UH65 585 aa13.53□□□□□ -0.24
CDH3-206ENST00000567674 CENPFP49454 3210 aa13.53□□□□□ -0.24
CDH3-206ENST00000567674 BRCA2P51587 3418 aa13.53□□□□□ -0.24
CDH3-206ENST00000567674 USP17L10C9JJH3 530 aa13.52□□□□□ -0.25
CDH3-206ENST00000567674 GOLIM4O00461 696 aa13.52□□□□□ -0.25
CDH3-206ENST00000567674 ERC2O15083 957 aa13.52□□□□□ -0.25
CDH3-206ENST00000567674 EN2P19622 333 aaPredicted RBP13.52□□□□□ -0.25
CDH3-206ENST00000567674 OSBPP22059 807 aa13.52□□□□□ -0.25
CDH3-206ENST00000567674 ADD2P35612 726 aa13.52□□□□□ -0.25
CDH3-206ENST00000567674 FCGRTP55899 365 aa13.52□□□□□ -0.25
CDH3-206ENST00000567674 RRP1P56182 461 aaKnown RBP13.52□□□□□ -0.25
CDH3-206ENST00000567674 BACE1P56817 501 aa13.52□□□□□ -0.25
CDH3-206ENST00000567674 SPP2Q13103 211 aa13.52□□□□□ -0.25
CDH3-206ENST00000567674 FAM110CQ1W6H9 321 aa13.52□□□□□ -0.25
CDH3-206ENST00000567674 GIMAP6Q6P9H5 292 aa13.52□□□□□ -0.25
CDH3-206ENST00000567674 DDRGK1Q96HY6 314 aa13.52□□□□□ -0.25
CDH3-206ENST00000567674 PALD1Q9ULE6 856 aa13.52□□□□□ -0.25
CDH3-206ENST00000567674 TTC41PQ6P2S7 1318 aa13.52□□□□□ -0.25
CDH3-206ENST00000567674 ZNF532Q9HCE3 1301 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms