RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 CAP1Q01518 475 aa11.38□□□□□ -0.59
CDH13-210ENST00000567445 PPATQ06203 517 aa11.38□□□□□ -0.59
CDH13-210ENST00000567445 TCP10Q12799 353 aa11.38□□□□□ -0.59
CDH13-210ENST00000567445 NFIAQ12857 509 aa11.38□□□□□ -0.59
CDH13-210ENST00000567445 ARHGEF6Q15052 776 aa11.38□□□□□ -0.59
CDH13-210ENST00000567445 CCDC102BQ68D86 513 aa11.38□□□□□ -0.59
CDH13-210ENST00000567445 ZGPATQ8N5A5 531 aaKnown RBP11.38□□□□□ -0.59
CDH13-210ENST00000567445 ZCCHC17Q9NP64 241 aaKnown RBP11.38□□□□□ -0.59
CDH13-210ENST00000567445 USP40Q9NVE5 1235 aa11.38□□□□□ -0.59
CDH13-210ENST00000567445 KIAA0100Q14667 2235 aaKnown RBP11.38□□□□□ -0.59
CDH13-210ENST00000567445 PDS5AQ29RF7 1337 aaKnown RBP11.38□□□□□ -0.59
CDH13-210ENST00000567445 AK9Q5TCS8 1911 aa11.38□□□□□ -0.59
CDH13-210ENST00000567445 BTBD19C9JJ37 291 aa11.38□□□□□ -0.59
CDH13-210ENST00000567445 IPO8O15397 1037 aaKnown RBP11.38□□□□□ -0.59
CDH13-210ENST00000567445 SRGAP3O43295 1099 aa11.38□□□□□ -0.59
CDH13-210ENST00000567445 EVI5O60447 810 aa11.38□□□□□ -0.59
CDH13-210ENST00000567445 TLR2O60603 784 aa11.38□□□□□ -0.59
CDH13-210ENST00000567445 INPP5BP32019 993 aa11.38□□□□□ -0.59
CDH13-210ENST00000567445 TIMM10P62072 90 aa11.38□□□□□ -0.59
CDH13-210ENST00000567445 MTX1Q13505 466 aa11.38□□□□□ -0.59
CDH13-210ENST00000567445 PRPF38BQ5VTL8 546 aaKnown RBP11.38□□□□□ -0.59
CDH13-210ENST00000567445 ZNF454Q8N9F8 522 aa11.38□□□□□ -0.59
CDH13-210ENST00000567445 ARMC5Q96C12 935 aa11.38□□□□□ -0.59
CDH13-210ENST00000567445 FAM198AQ9UFP1 575 aa11.38□□□□□ -0.59
CDH13-210ENST00000567445 ZNF112Q9UJU3 913 aa11.38□□□□□ -0.59
CDH13-210ENST00000567445 AKAP2Q9Y2D5 859 aa11.38□□□□□ -0.59
CDH13-210ENST00000567445 PSEN2P49810 448 aa11.37□□□□□ -0.59
CDH13-210ENST00000567445 RASGRF1Q13972 1273 aa11.37□□□□□ -0.59
CDH13-210ENST00000567445 MKI67P46013 3256 aaKnown RBP11.36□□□□□ -0.59
CDH13-210ENST00000567445 GAKO14976 1311 aa11.36□□□□□ -0.59
CDH13-210ENST00000567445 MYH2Q9UKX2 1941 aa11.36□□□□□ -0.59
CDH13-210ENST00000567445 A0A1B0GUL7 405 aa11.36□□□□□ -0.59
CDH13-210ENST00000567445 TRIM27P14373 513 aa11.36□□□□□ -0.59
CDH13-210ENST00000567445 TFCP2Q12800 502 aa11.36□□□□□ -0.59
CDH13-210ENST00000567445 MVPQ14764 893 aaKnown RBP11.36□□□□□ -0.59
CDH13-210ENST00000567445 SPTY2D1Q68D10 685 aaPredicted RBP11.36□□□□□ -0.59
CDH13-210ENST00000567445 ADGRD1Q6QNK2 874 aa11.36□□□□□ -0.59
CDH13-210ENST00000567445 DZIP1Q86YF9 867 aaKnown RBP11.36□□□□□ -0.59
CDH13-210ENST00000567445 SLF2Q8IX21 1173 aa11.36□□□□□ -0.59
CDH13-210ENST00000567445 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.36□□□□□ -0.59
CDH13-210ENST00000567445 XAGE2Q96GT9 111 aa11.36□□□□□ -0.59
CDH13-210ENST00000567445 IDI2Q9BXS1 227 aa11.36□□□□□ -0.59
CDH13-210ENST00000567445 ABCF2Q9UG63 623 aa11.36□□□□□ -0.59
CDH13-210ENST00000567445 KCNH4Q9UQ05 1017 aa11.36□□□□□ -0.59
CDH13-210ENST00000567445 BRCA2P51587 3418 aa11.35□□□□□ -0.59
CDH13-210ENST00000567445 TK2O00142 265 aa11.35□□□□□ -0.59
CDH13-210ENST00000567445 ENTPD3O75355 529 aa11.35□□□□□ -0.59
CDH13-210ENST00000567445 BCAR3O75815 825 aa11.35□□□□□ -0.59
CDH13-210ENST00000567445 RGS3P49796 1198 aa11.35□□□□□ -0.59
CDH13-210ENST00000567445 KIF22Q14807 665 aa11.35□□□□□ -0.59
CDH13-210ENST00000567445 NOL9Q5SY16 702 aaKnown RBP11.35□□□□□ -0.59
CDH13-210ENST00000567445 DMRTA1Q5VZB9 504 aa11.35□□□□□ -0.59
CDH13-210ENST00000567445 ATF7IPQ6VMQ6 1270 aa11.35□□□□□ -0.59
CDH13-210ENST00000567445 ANKRD23Q86SG2 305 aa11.35□□□□□ -0.59
CDH13-210ENST00000567445 ZFPM1Q8IX07 1006 aa11.35□□□□□ -0.59
CDH13-210ENST00000567445 EMILIN3Q9NT22 766 aa11.35□□□□□ -0.59
CDH13-210ENST00000567445 RBBP6Q7Z6E9 1792 aaKnown RBP11.34□□□□□ -0.59
CDH13-210ENST00000567445 RFX7Q2KHR2 1363 aa11.34□□□□□ -0.59
CDH13-210ENST00000567445 ATRNL1Q5VV63 1379 aa11.34□□□□□ -0.59
CDH13-210ENST00000567445 GNRH1P01148 92 aa11.34□□□□□ -0.59
CDH13-210ENST00000567445 GNAI2P04899 355 aa11.34□□□□□ -0.59
CDH13-210ENST00000567445 FOSBP53539 338 aa11.34□□□□□ -0.59
CDH13-210ENST00000567445 LACTBP83111 547 aaPredicted RBP11.34□□□□□ -0.59
CDH13-210ENST00000567445 SLC9C1Q4G0N8 1177 aa11.34□□□□□ -0.59
CDH13-210ENST00000567445 NBPF11Q86T75 865 aa11.34□□□□□ -0.59
CDH13-210ENST00000567445 FRAT1Q92837 279 aaPredicted RBP11.34□□□□□ -0.59
CDH13-210ENST00000567445 ZNF333Q96JL9 665 aa11.34□□□□□ -0.59
CDH13-210ENST00000567445 NEUROD6Q96NK8 337 aa11.34□□□□□ -0.59
CDH13-210ENST00000567445 ARHGAP39Q9C0H5 1083 aa11.34□□□□□ -0.59
CDH13-210ENST00000567445 WDR70Q9NW82 654 aa11.34□□□□□ -0.59
CDH13-210ENST00000567445 PTCH2Q9Y6C5 1203 aa11.34□□□□□ -0.59
CDH13-210ENST00000567445 PHF20L1A8MW92 1017 aa11.33□□□□□ -0.6
CDH13-210ENST00000567445 PDHXO00330 501 aa11.33□□□□□ -0.6
CDH13-210ENST00000567445 BTDP43251 543 aa11.33□□□□□ -0.6
CDH13-210ENST00000567445 ZSCAN29Q8IWY8 852 aaPredicted RBP11.33□□□□□ -0.6
CDH13-210ENST00000567445 CLUAP1Q96AJ1 413 aa11.33□□□□□ -0.6
CDH13-210ENST00000567445 TNNQ9UQP3 1299 aa11.33□□□□□ -0.6
CDH13-210ENST00000567445 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.33□□□□□ -0.6
CDH13-210ENST00000567445 MROH7-TTC4A0A0A0MT08 1334 aa11.33□□□□□ -0.6
CDH13-210ENST00000567445 CXCL11O14625 94 aa11.32□□□□□ -0.6
CDH13-210ENST00000567445 MAP3K10Q02779 954 aa11.32□□□□□ -0.6
CDH13-210ENST00000567445 MECOMQ03112 1051 aa11.32□□□□□ -0.6
CDH13-210ENST00000567445 MOGSQ13724 837 aa11.32□□□□□ -0.6
CDH13-210ENST00000567445 GORABQ5T7V8 394 aa11.32□□□□□ -0.6
CDH13-210ENST00000567445 C17orf99Q6UX52 265 aa11.32□□□□□ -0.6
CDH13-210ENST00000567445 SH3BP5LQ7L8J4 393 aa11.32□□□□□ -0.6
CDH13-210ENST00000567445 SCYL3Q8IZE3 742 aa11.32□□□□□ -0.6
CDH13-210ENST00000567445 SPATA5Q8NB90 893 aa11.32□□□□□ -0.6
CDH13-210ENST00000567445 KCNK17Q96T54 332 aa11.32□□□□□ -0.6
CDH13-210ENST00000567445 HMG20BQ9P0W2 317 aa11.32□□□□□ -0.6
CDH13-210ENST00000567445 DOCK2Q92608 1830 aa11.32□□□□□ -0.6
CDH13-210ENST00000567445 GPR75-ASB3A0A0A6YYF3 556 aa11.32□□□□□ -0.6
CDH13-210ENST00000567445 PNMA6EA0A0J9YXQ4 647 aa11.32□□□□□ -0.6
CDH13-210ENST00000567445 DDTLA6NHG4 134 aaPredicted RBP11.32□□□□□ -0.6
CDH13-210ENST00000567445 EN2P19622 333 aaPredicted RBP11.32□□□□□ -0.6
CDH13-210ENST00000567445 ARID4AP29374 1257 aaPredicted RBP11.32□□□□□ -0.6
CDH13-210ENST00000567445 PRMT2P55345 433 aa11.32□□□□□ -0.6
CDH13-210ENST00000567445 G3BP1Q13283 466 aaKnown RBP eCLIP11.32□□□□□ -0.6
CDH13-210ENST00000567445 PICALMQ13492 652 aa11.32□□□□□ -0.6
CDH13-210ENST00000567445 DDX4Q9NQI0 724 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms