RNA–Protein interactions for RNA: ENST00000566889.5

FANCA-221, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-221ENST00000566889 TRMT44Q8IYL2 757 aaKnown RBP28.41■■■□□ 2.14
FANCA-221ENST00000566889 WWC3Q9ULE0 1092 aa28.41■■■□□ 2.14
FANCA-221ENST00000566889 ZMYM6O95789 1325 aa28.41■■■□□ 2.14
FANCA-221ENST00000566889 A0A0U1RQJ8 604 aa28.41■■■□□ 2.14
FANCA-221ENST00000566889 USP14P54578 494 aa28.41■■■□□ 2.14
FANCA-221ENST00000566889 ATRIPQ8WXE1 791 aa28.41■■■□□ 2.14
FANCA-221ENST00000566889 PSEN1P49768 467 aa28.4■■■□□ 2.14
FANCA-221ENST00000566889 MLECQ14165 292 aa28.4■■■□□ 2.14
FANCA-221ENST00000566889 APTXQ7Z2E3 356 aaKnown RBP28.4■■■□□ 2.14
FANCA-221ENST00000566889 PLEKHA4Q9H4M7 779 aa28.4■■■□□ 2.14
FANCA-221ENST00000566889 KDM6AO15550 1401 aaPredicted RBP28.4■■■□□ 2.14
FANCA-221ENST00000566889 CPDO75976 1380 aa28.4■■■□□ 2.14
FANCA-221ENST00000566889 M0R2C6 588 aa28.39■■■□□ 2.14
FANCA-221ENST00000566889 FILIP1LQ4L180 1135 aa28.39■■■□□ 2.14
FANCA-221ENST00000566889 CPLX2Q6PUV4 134 aaKnown RBP28.39■■■□□ 2.14
FANCA-221ENST00000566889 RALYLQ86SE5 291 aaKnown RBP28.39■■■□□ 2.14
FANCA-221ENST00000566889 CDC5LQ99459 802 aaKnown RBP28.39■■■□□ 2.14
FANCA-221ENST00000566889 LTN1O94822 1766 aa28.39■■■□□ 2.14
FANCA-221ENST00000566889 ITIH6Q6UXX5 1313 aa28.39■■■□□ 2.14
FANCA-221ENST00000566889 TARSL2A2RTX5 802 aaKnown RBP28.39■■■□□ 2.14
FANCA-221ENST00000566889 SEMA3EO15041 775 aa28.39■■■□□ 2.14
FANCA-221ENST00000566889 TEX33O43247 280 aa28.39■■■□□ 2.14
FANCA-221ENST00000566889 GPATCH11Q8N954 259 aa28.39■■■□□ 2.14
FANCA-221ENST00000566889 COG1Q8WTW3 980 aa28.39■■■□□ 2.14
FANCA-221ENST00000566889 MED15Q96RN5 788 aa28.39■■■□□ 2.14
FANCA-221ENST00000566889 EXOC5O00471 708 aa28.38■■■□□ 2.13
FANCA-221ENST00000566889 EBAG9O00559 213 aa28.38■■■□□ 2.13
FANCA-221ENST00000566889 ANTXR2P58335 489 aa28.38■■■□□ 2.13
FANCA-221ENST00000566889 STIM1Q13586 685 aa28.38■■■□□ 2.13
FANCA-221ENST00000566889 SPATA1Q5VX52 437 aa28.38■■■□□ 2.13
FANCA-221ENST00000566889 ADD3Q9UEY8 706 aaKnown RBP28.38■■■□□ 2.13
FANCA-221ENST00000566889 UBR1Q8IWV7 1749 aa28.38■■■□□ 2.13
FANCA-221ENST00000566889 TRDNQ13061 729 aa28.38■■■□□ 2.13
FANCA-221ENST00000566889 TRIM29Q14134 588 aa28.38■■■□□ 2.13
FANCA-221ENST00000566889 E2F4Q16254 413 aa28.38■■■□□ 2.13
FANCA-221ENST00000566889 SLC9C2Q5TAH2 1124 aa28.38■■■□□ 2.13
FANCA-221ENST00000566889 RPAINQ86UA6 219 aa28.38■■■□□ 2.13
FANCA-221ENST00000566889 POTEDQ86YR6 584 aa28.38■■■□□ 2.13
FANCA-221ENST00000566889 RPGRIP1Q96KN7 1286 aa28.38■■■□□ 2.13
FANCA-221ENST00000566889 FAM76AQ8TAV0 307 aa28.37■■■□□ 2.13
FANCA-221ENST00000566889 SPATA20Q8TB22 786 aa28.37■■■□□ 2.13
FANCA-221ENST00000566889 CPLX3Q8WVH0 158 aa28.37■■■□□ 2.13
FANCA-221ENST00000566889 NEUROD6Q96NK8 337 aa28.37■■■□□ 2.13
FANCA-221ENST00000566889 WDR17Q8IZU2 1322 aa28.36■■■□□ 2.13
FANCA-221ENST00000566889 ZC3H4Q9UPT8 1303 aaKnown RBP28.36■■■□□ 2.13
FANCA-221ENST00000566889 NWD2Q9ULI1 1742 aa28.36■■■□□ 2.13
FANCA-221ENST00000566889 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.36■■■□□ 2.13
FANCA-221ENST00000566889 PRR29P0C7W0 189 aa28.35■■■□□ 2.13
FANCA-221ENST00000566889 ARHGAP25P42331 645 aa28.35■■■□□ 2.13
FANCA-221ENST00000566889 CXorf56Q9H5V9 222 aa28.35■■■□□ 2.13
FANCA-221ENST00000566889 TNRQ92752 1358 aa28.35■■■□□ 2.13
FANCA-221ENST00000566889 IFIT1P09914 478 aaKnown RBP28.35■■■□□ 2.13
FANCA-221ENST00000566889 CASP14P31944 242 aa28.35■■■□□ 2.13
FANCA-221ENST00000566889 AKAP17AQ02040 695 aaKnown RBP28.35■■■□□ 2.13
FANCA-221ENST00000566889 XAGE3Q8WTP9 111 aa28.35■■■□□ 2.13
FANCA-221ENST00000566889 AIFM3Q96NN9 605 aa28.35■■■□□ 2.13
FANCA-221ENST00000566889 CRACR2AQ9BSW2 395 aa28.35■■■□□ 2.13
FANCA-221ENST00000566889 SERTAD1Q9UHV2 236 aa28.35■■■□□ 2.13
FANCA-221ENST00000566889 FAM169AQ9Y6X4 670 aa28.35■■■□□ 2.13
FANCA-221ENST00000566889 CCDC196A0A1B0GTZ2 297 aa28.34■■■□□ 2.13
FANCA-221ENST00000566889 TFRCP02786 760 aaKnown RBP28.34■■■□□ 2.13
FANCA-221ENST00000566889 METAP2P50579 478 aaKnown RBP eCLIP28.34■■■□□ 2.13
FANCA-221ENST00000566889 HAND2P61296 217 aa28.34■■■□□ 2.13
FANCA-221ENST00000566889 CYP26C1Q6V0L0 522 aa28.34■■■□□ 2.13
FANCA-221ENST00000566889 RAB11FIP4Q86YS3 637 aa28.34■■■□□ 2.13
FANCA-221ENST00000566889 ZNF579Q8NAF0 562 aaKnown RBP28.34■■■□□ 2.13
FANCA-221ENST00000566889 ACRBPQ8NEB7 543 aa28.34■■■□□ 2.13
FANCA-221ENST00000566889 ANKRD20A12PQ8NF67 263 aa28.34■■■□□ 2.13
FANCA-221ENST00000566889 OSBP2Q969R2 916 aa28.34■■■□□ 2.13
FANCA-221ENST00000566889 SIPA1L3O60292 1781 aaPredicted RBP28.34■■■□□ 2.13
FANCA-221ENST00000566889 POLR2DO15514 142 aaKnown RBP28.34■■■□□ 2.13
FANCA-221ENST00000566889 ZNF827Q17R98 1081 aa28.34■■■□□ 2.13
FANCA-221ENST00000566889 GBP6Q6ZN66 633 aa28.34■■■□□ 2.13
FANCA-221ENST00000566889 TRAPPC11Q7Z392 1133 aa28.34■■■□□ 2.13
FANCA-221ENST00000566889 ZFYP08048 801 aaPredicted RBP28.33■■■□□ 2.13
FANCA-221ENST00000566889 PTPREP23469 700 aa28.33■■■□□ 2.13
FANCA-221ENST00000566889 SF3B2Q13435 895 aaKnown RBP28.33■■■□□ 2.13
FANCA-221ENST00000566889 NBPF14Q5TI25 921 aa28.33■■■□□ 2.13
FANCA-221ENST00000566889 CDKAL1Q5VV42 579 aa28.33■■■□□ 2.13
FANCA-221ENST00000566889 NCAPH2Q6IBW4 605 aa28.33■■■□□ 2.13
FANCA-221ENST00000566889 FGAP02671 866 aa28.33■■■□□ 2.12
FANCA-221ENST00000566889 GYPCP04921 128 aa28.33■■■□□ 2.12
FANCA-221ENST00000566889 HNRNPH1P31943 449 aaKnown RBP28.33■■■□□ 2.12
FANCA-221ENST00000566889 MAP2K2P36507 400 aa28.33■■■□□ 2.12
FANCA-221ENST00000566889 IRAK1P51617 712 aa28.33■■■□□ 2.12
FANCA-221ENST00000566889 PPFIA1Q13136 1202 aa28.33■■■□□ 2.12
FANCA-221ENST00000566889 COPS6Q7L5N1 327 aa28.33■■■□□ 2.12
FANCA-221ENST00000566889 UBE3BQ7Z3V4 1068 aa28.33■■■□□ 2.12
FANCA-221ENST00000566889 STK11IPQ8N1F8 1099 aa28.33■■■□□ 2.12
FANCA-221ENST00000566889 KAT2BQ92831 832 aa28.33■■■□□ 2.12
FANCA-221ENST00000566889 SECISBP2LQ93073 1101 aaKnown RBP28.33■■■□□ 2.12
FANCA-221ENST00000566889 CCDC9Q9Y3X0 531 aaKnown RBP28.33■■■□□ 2.12
FANCA-221ENST00000566889 CCDC172P0C7W6 258 aa28.32■■■□□ 2.12
FANCA-221ENST00000566889 CCT5P48643 541 aa28.32■■■□□ 2.12
FANCA-221ENST00000566889 ANKRD13DQ6ZTN6 518 aa28.32■■■□□ 2.12
FANCA-221ENST00000566889 ANGEL1Q9UNK9 670 aaKnown RBP28.32■■■□□ 2.12
FANCA-221ENST00000566889 AMOTL2Q9Y2J4 779 aa28.32■■■□□ 2.12
FANCA-221ENST00000566889 LIG3P49916 1009 aa28.31■■■□□ 2.12
FANCA-221ENST00000566889 TRIM14Q14142 442 aa28.31■■■□□ 2.12
FANCA-221ENST00000566889 FBXO2Q9UK22 296 aaPredicted RBP28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms