RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 OTOFQ9HC10 1997 aa31.37■■■□□ 2.61
NME3-209ENST00000566600 POLR3DP05423 398 aaPredicted RBP31.36■■■□□ 2.61
NME3-209ENST00000566600 METTL16Q86W50 562 aaKnown RBP31.36■■■□□ 2.61
NME3-209ENST00000566600 AMOTL1Q8IY63 956 aa31.36■■■□□ 2.61
NME3-209ENST00000566600 GIMAP6Q6P9H5 292 aa31.35■■■□□ 2.61
NME3-209ENST00000566600 SEC62Q99442 399 aaKnown RBP31.35■■■□□ 2.61
NME3-209ENST00000566600 EHD4Q9H223 541 aa31.35■■■□□ 2.61
NME3-209ENST00000566600 ELP3Q9H9T3 547 aa31.35■■■□□ 2.61
NME3-209ENST00000566600 PHF20L1A8MW92 1017 aa31.34■■■□□ 2.61
NME3-209ENST00000566600 GSPT1P15170 499 aaKnown RBP31.34■■■□□ 2.61
NME3-209ENST00000566600 SDSP20132 328 aa31.34■■■□□ 2.61
NME3-209ENST00000566600 ZKSCAN4Q969J2 545 aaPredicted RBP31.34■■■□□ 2.61
NME3-209ENST00000566600 DDX60LQ5H9U9 1706 aaKnown RBP31.33■■■□□ 2.61
NME3-209ENST00000566600 AOC2O75106 756 aa31.33■■■□□ 2.61
NME3-209ENST00000566600 ZBTB48P10074 688 aaPredicted RBP31.33■■■□□ 2.61
NME3-209ENST00000566600 INPP5BP32019 993 aa31.33■■■□□ 2.61
NME3-209ENST00000566600 NOL9Q5SY16 702 aaKnown RBP31.33■■■□□ 2.61
NME3-209ENST00000566600 SPRYD7Q5W111 196 aa31.33■■■□□ 2.61
NME3-209ENST00000566600 REM2Q8IYK8 340 aaPredicted RBP31.33■■■□□ 2.61
NME3-209ENST00000566600 ZBTB4Q9P1Z0 1013 aaPredicted RBP31.33■■■□□ 2.61
NME3-209ENST00000566600 SERPINB13Q9UIV8 391 aa31.33■■■□□ 2.61
NME3-209ENST00000566600 TAOK2Q9UL54 1235 aa31.33■■■□□ 2.61
NME3-209ENST00000566600 THSD7BQ9C0I4 1608 aa31.33■■■□□ 2.61
NME3-209ENST00000566600 CTNND1O60716 968 aaKnown RBP31.32■■■□□ 2.6
NME3-209ENST00000566600 MCMDC2Q4G0Z9 681 aa31.32■■■□□ 2.6
NME3-209ENST00000566600 WNK4Q96J92 1243 aa31.32■■■□□ 2.6
NME3-209ENST00000566600 DIAPH3Q9NSV4 1193 aa31.32■■■□□ 2.6
NME3-209ENST00000566600 SNCAIPQ9Y6H5 919 aa31.32■■■□□ 2.6
NME3-209ENST00000566600 GSG1L2A8MUP6 293 aa31.31■■■□□ 2.6
NME3-209ENST00000566600 SLC4A8Q2Y0W8 1093 aa31.31■■■□□ 2.6
NME3-209ENST00000566600 ERO1BQ86YB8 467 aa31.31■■■□□ 2.6
NME3-209ENST00000566600 NACAP1Q9BZK3 213 aa31.31■■■□□ 2.6
NME3-209ENST00000566600 SIPA1L1O43166 1804 aa31.31■■■□□ 2.6
NME3-209ENST00000566600 SPDYE5A6NIY4 337 aa31.3■■■□□ 2.6
NME3-209ENST00000566600 FAM196BA6NMK8 535 aa31.3■■■□□ 2.6
NME3-209ENST00000566600 PATL2C9JE40 543 aaKnown RBP31.3■■■□□ 2.6
NME3-209ENST00000566600 APPP05067 770 aa31.3■■■□□ 2.6
NME3-209ENST00000566600 NMIQ13287 307 aaPredicted RBP31.3■■■□□ 2.6
NME3-209ENST00000566600 SCYL3Q8IZE3 742 aa31.3■■■□□ 2.6
NME3-209ENST00000566600 FAM227BQ96M60 508 aa31.3■■■□□ 2.6
NME3-209ENST00000566600 PLCD1P51178 756 aa31.29■■■□□ 2.6
NME3-209ENST00000566600 MFAP1P55081 439 aaKnown RBP31.29■■■□□ 2.6
NME3-209ENST00000566600 KIF23Q02241 960 aaPredicted RBP31.29■■■□□ 2.6
NME3-209ENST00000566600 MAP2K1Q02750 393 aaPredicted RBP31.29■■■□□ 2.6
NME3-209ENST00000566600 OPTNQ96CV9 577 aa31.29■■■□□ 2.6
NME3-209ENST00000566600 PICK1Q9NRD5 415 aa31.29■■■□□ 2.6
NME3-209ENST00000566600 ARPP21Q9UBL0 812 aaPredicted RBP31.29■■■□□ 2.6
NME3-209ENST00000566600 A0A0D9SFI3 127 aa31.28■■■□□ 2.6
NME3-209ENST00000566600 USP17L12C9JPN9 530 aa31.28■■■□□ 2.6
NME3-209ENST00000566600 USP17L21D6R901 530 aa31.28■■■□□ 2.6
NME3-209ENST00000566600 SLURP2P0DP57 97 aa31.28■■■□□ 2.6
NME3-209ENST00000566600 PPATQ06203 517 aa31.27■■■□□ 2.6
NME3-209ENST00000566600 C12orf60Q5U649 245 aa31.27■■■□□ 2.6
NME3-209ENST00000566600 DNAJC18Q9H819 358 aa31.27■■■□□ 2.6
NME3-209ENST00000566600 BAZ2AQ9UIF9 1905 aaKnown RBP31.26■■■□□ 2.6
NME3-209ENST00000566600 CAP2P40123 477 aa31.26■■■□□ 2.59
NME3-209ENST00000566600 TDO2P48775 406 aa31.26■■■□□ 2.59
NME3-209ENST00000566600 MKRN3Q13064 507 aaKnown RBP31.26■■■□□ 2.59
NME3-209ENST00000566600 SBK1Q52WX2 424 aa31.26■■■□□ 2.59
NME3-209ENST00000566600 CTR9Q6PD62 1173 aa31.26■■■□□ 2.59
NME3-209ENST00000566600 CCDC129Q6ZRS4 1044 aa31.26■■■□□ 2.59
NME3-209ENST00000566600 OTUD5Q96G74 571 aa31.26■■■□□ 2.59
NME3-209ENST00000566600 MANSC4A6NHS7 340 aaPredicted RBP31.25■■■□□ 2.59
NME3-209ENST00000566600 SREBF2Q12772 1141 aa31.25■■■□□ 2.59
NME3-209ENST00000566600 PPIL2Q13356 520 aa31.25■■■□□ 2.59
NME3-209ENST00000566600 IFNL3Q8IZI9 196 aa31.25■■■□□ 2.59
NME3-209ENST00000566600 ZIC5Q96T25 663 aa31.25■■■□□ 2.59
NME3-209ENST00000566600 GINM1Q9NU53 330 aa31.25■■■□□ 2.59
NME3-209ENST00000566600 SWAP70Q9UH65 585 aa31.25■■■□□ 2.59
NME3-209ENST00000566600 CYP2D6P10635 497 aa31.24■■■□□ 2.59
NME3-209ENST00000566600 INHBEP58166 350 aa31.24■■■□□ 2.59
NME3-209ENST00000566600 GABPAQ06546 454 aa31.24■■■□□ 2.59
NME3-209ENST00000566600 TATDN1Q6P1N9 297 aa31.24■■■□□ 2.59
NME3-209ENST00000566600 CWC27Q6UX04 472 aaKnown RBP31.24■■■□□ 2.59
NME3-209ENST00000566600 DOCK1Q14185 1865 aa31.24■■■□□ 2.59
NME3-209ENST00000566600 CCDC171Q6TFL3 1326 aa31.24■■■□□ 2.59
NME3-209ENST00000566600 GJA5P36382 358 aa31.23■■■□□ 2.59
NME3-209ENST00000566600 CNKSR2Q8WXI2 1034 aa31.23■■■□□ 2.59
NME3-209ENST00000566600 BEGAINQ9BUH8 593 aa31.23■■■□□ 2.59
NME3-209ENST00000566600 NAPBQ9H115 298 aa31.23■■■□□ 2.59
NME3-209ENST00000566600 EPB41L4AQ9HCS5 686 aaPredicted RBP31.23■■■□□ 2.59
NME3-209ENST00000566600 PTPRAP18433 802 aa31.22■■■□□ 2.59
NME3-209ENST00000566600 GTF2A2P52657 109 aa31.22■■■□□ 2.59
NME3-209ENST00000566600 BMP2KLQ5H9B9 411 aa31.22■■■□□ 2.59
NME3-209ENST00000566600 ASNSP08243 561 aa31.21■■■□□ 2.59
NME3-209ENST00000566600 SKAP1Q86WV1 359 aa31.21■■■□□ 2.59
NME3-209ENST00000566600 RUFY2Q8WXA3 655 aa31.21■■■□□ 2.59
NME3-209ENST00000566600 TBC1D2Q9BYX2 928 aa31.21■■■□□ 2.59
NME3-209ENST00000566600 WBP1LQ9NX94 342 aa31.21■■■□□ 2.59
NME3-209ENST00000566600 CYP2D7A0A087X1C5 515 aa31.2■■■□□ 2.59
NME3-209ENST00000566600 TM4SF4P48230 202 aa31.2■■■□□ 2.59
NME3-209ENST00000566600 RRP1BQ14684 758 aaKnown RBP31.2■■■□□ 2.59
NME3-209ENST00000566600 CERKLQ49MI3 558 aaPredicted RBP31.2■■■□□ 2.59
NME3-209ENST00000566600 ZNF589Q86UQ0 364 aaPredicted RBP31.2■■■□□ 2.59
NME3-209ENST00000566600 ZHX2Q9Y6X8 837 aa31.2■■■□□ 2.59
NME3-209ENST00000566600 LAMB1P07942 1786 aa31.2■■■□□ 2.58
NME3-209ENST00000566600 MINDY4BA8MYZ0 360 aa31.19■■■□□ 2.58
NME3-209ENST00000566600 IRF6O14896 467 aa31.19■■■□□ 2.58
NME3-209ENST00000566600 SHMT1P34896 483 aa31.19■■■□□ 2.58
NME3-209ENST00000566600 SNAPC2Q13487 334 aa31.19■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms