RNA–Protein interactions for RNA: ENST00000566009.5

SMPD3-206, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-206ENST00000566009 SSTR3P32745 418 aaPredicted RBP11.67□□□□□ -0.54
SMPD3-206ENST00000566009 ADCYAP1R1P41586 468 aa11.67□□□□□ -0.54
SMPD3-206ENST00000566009 HDLBPQ00341 1268 aaKnown RBP11.67□□□□□ -0.54
SMPD3-206ENST00000566009 POTEBQ6S5H4 581 aa11.67□□□□□ -0.54
SMPD3-206ENST00000566009 C16orf59Q7L2K0 433 aa11.67□□□□□ -0.54
SMPD3-206ENST00000566009 FERMT2Q96AC1 680 aa11.67□□□□□ -0.54
SMPD3-206ENST00000566009 CFAP53Q96M91 514 aa11.67□□□□□ -0.54
SMPD3-206ENST00000566009 DBF4Q9UBU7 674 aaPredicted RBP11.67□□□□□ -0.54
SMPD3-206ENST00000566009 PRRC2BQ5JSZ5 2229 aaKnown RBP11.67□□□□□ -0.54
SMPD3-206ENST00000566009 DCXO43602 365 aa11.66□□□□□ -0.54
SMPD3-206ENST00000566009 GTPBP6O43824 516 aaPredicted RBP11.66□□□□□ -0.54
SMPD3-206ENST00000566009 ID4P47928 161 aa11.66□□□□□ -0.54
SMPD3-206ENST00000566009 KRT24Q2M2I5 525 aa11.66□□□□□ -0.54
SMPD3-206ENST00000566009 MFSD14CQ5VZR4 134 aa11.66□□□□□ -0.54
SMPD3-206ENST00000566009 APOBEC3HQ6NTF7 200 aaKnown RBP11.66□□□□□ -0.54
SMPD3-206ENST00000566009 TDRD7Q8NHU6 1098 aaKnown RBP11.66□□□□□ -0.54
SMPD3-206ENST00000566009 ZDHHC15Q96MV8 337 aa11.66□□□□□ -0.54
SMPD3-206ENST00000566009 TMEM39AQ9NV64 488 aa11.66□□□□□ -0.54
SMPD3-206ENST00000566009 C5orf42Q9H799 3197 aa11.65□□□□□ -0.54
SMPD3-206ENST00000566009 PTPRZ1P23471 2315 aaPredicted RBP11.65□□□□□ -0.54
SMPD3-206ENST00000566009 UTYO14607 1347 aa11.65□□□□□ -0.54
SMPD3-206ENST00000566009 PTPRFP10586 1907 aa11.65□□□□□ -0.54
SMPD3-206ENST00000566009 DLG5Q8TDM6 1919 aa11.65□□□□□ -0.54
SMPD3-206ENST00000566009 PHF20L1A8MW92 1017 aa11.65□□□□□ -0.54
SMPD3-206ENST00000566009 RFXAPO00287 272 aa11.65□□□□□ -0.54
SMPD3-206ENST00000566009 PER1O15534 1290 aaPredicted RBP11.65□□□□□ -0.54
SMPD3-206ENST00000566009 MYCNP04198 464 aaPredicted RBP11.65□□□□□ -0.54
SMPD3-206ENST00000566009 CNGB1Q14028 1251 aaPredicted RBP11.65□□□□□ -0.54
SMPD3-206ENST00000566009 MORN1Q5T089 497 aa11.65□□□□□ -0.54
SMPD3-206ENST00000566009 TEKT1Q969V4 418 aa11.65□□□□□ -0.54
SMPD3-206ENST00000566009 APBA2Q99767 749 aa11.65□□□□□ -0.54
SMPD3-206ENST00000566009 ASCC2Q9H1I8 757 aaPredicted RBP11.65□□□□□ -0.54
SMPD3-206ENST00000566009 SPINK5Q9NQ38 1064 aaPredicted RBP11.65□□□□□ -0.54
SMPD3-206ENST00000566009 HYPKQ9NX55 129 aa11.65□□□□□ -0.54
SMPD3-206ENST00000566009 PEX10O60683 326 aa11.64□□□□□ -0.55
SMPD3-206ENST00000566009 ITGA6P23229 1130 aa11.64□□□□□ -0.55
SMPD3-206ENST00000566009 TCP10Q12799 353 aa11.64□□□□□ -0.55
SMPD3-206ENST00000566009 TCF15Q12870 199 aa11.64□□□□□ -0.55
SMPD3-206ENST00000566009 IER5LQ5T953 404 aa11.64□□□□□ -0.55
SMPD3-206ENST00000566009 HDGFL1Q5TGJ6 251 aa11.64□□□□□ -0.55
SMPD3-206ENST00000566009 KRT40Q6A162 431 aa11.64□□□□□ -0.55
SMPD3-206ENST00000566009 PROCA1Q8NCQ7 364 aaPredicted RBP11.64□□□□□ -0.55
SMPD3-206ENST00000566009 SLC44A5Q8NCS7 719 aa11.64□□□□□ -0.55
SMPD3-206ENST00000566009 FLRT1Q9NZU1 646 aa11.64□□□□□ -0.55
SMPD3-206ENST00000566009 CHD7Q9P2D1 2997 aa11.64□□□□□ -0.55
SMPD3-206ENST00000566009 NEFMP07197 916 aa11.63□□□□□ -0.55
SMPD3-206ENST00000566009 MAPK4P31152 587 aa11.63□□□□□ -0.55
SMPD3-206ENST00000566009 GOLGA2Q08379 1002 aa11.63□□□□□ -0.55
SMPD3-206ENST00000566009 PABPC4Q13310 644 aaKnown RBP eCLIP11.63□□□□□ -0.55
SMPD3-206ENST00000566009 KCTD2Q14681 263 aa11.63□□□□□ -0.55
SMPD3-206ENST00000566009 ANO1Q5XXA6 986 aa11.63□□□□□ -0.55
SMPD3-206ENST00000566009 PPP2R2DQ66LE6 453 aa11.63□□□□□ -0.55
SMPD3-206ENST00000566009 CCDC174Q6PII3 467 aa11.63□□□□□ -0.55
SMPD3-206ENST00000566009 ZNF365Q70YC5 407 aa11.63□□□□□ -0.55
SMPD3-206ENST00000566009 GPR142Q7Z601 462 aa11.63□□□□□ -0.55
SMPD3-206ENST00000566009 CCDC84Q86UT8 332 aaPredicted RBP11.63□□□□□ -0.55
SMPD3-206ENST00000566009 TRPV1Q8NER1 839 aa11.63□□□□□ -0.55
SMPD3-206ENST00000566009 GPRC5AQ8NFJ5 357 aa11.63□□□□□ -0.55
SMPD3-206ENST00000566009 MRIQ9BWK5 157 aa11.63□□□□□ -0.55
SMPD3-206ENST00000566009 FAM86C1Q9NVL1 165 aa11.63□□□□□ -0.55
SMPD3-206ENST00000566009 BABAM1Q9NWV8 329 aa11.63□□□□□ -0.55
SMPD3-206ENST00000566009 MED19A0JLT2 244 aaPredicted RBP11.62□□□□□ -0.55
SMPD3-206ENST00000566009 PQBP1O60828 265 aaKnown RBP11.62□□□□□ -0.55
SMPD3-206ENST00000566009 TIMP1P01033 207 aa11.62□□□□□ -0.55
SMPD3-206ENST00000566009 FAAP100Q0VG06 881 aa11.62□□□□□ -0.55
SMPD3-206ENST00000566009 MAP2K5Q13163 448 aa11.62□□□□□ -0.55
SMPD3-206ENST00000566009 PPIGQ13427 754 aaKnown RBP eCLIP11.62□□□□□ -0.55
SMPD3-206ENST00000566009 NFE2L2Q16236 605 aa11.62□□□□□ -0.55
SMPD3-206ENST00000566009 MFSD5Q6N075 450 aa11.62□□□□□ -0.55
SMPD3-206ENST00000566009 EDC3Q96F86 508 aaKnown RBP11.62□□□□□ -0.55
SMPD3-206ENST00000566009 TXNRD2Q9NNW7 524 aa11.62□□□□□ -0.55
SMPD3-206ENST00000566009 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.62□□□□□ -0.55
SMPD3-206ENST00000566009 DCHS1Q96JQ0 3298 aa11.62□□□□□ -0.55
SMPD3-206ENST00000566009 ZFHX4Q86UP3 3567 aa11.61□□□□□ -0.55
SMPD3-206ENST00000566009 ZFHX2Q9C0A1 2572 aaPredicted RBP11.61□□□□□ -0.55
SMPD3-206ENST00000566009 ACRP10323 421 aa11.61□□□□□ -0.55
SMPD3-206ENST00000566009 SLC5A1P13866 664 aa11.61□□□□□ -0.55
SMPD3-206ENST00000566009 CYP2C19P33261 490 aa11.61□□□□□ -0.55
SMPD3-206ENST00000566009 RABGGTBP53611 331 aa11.61□□□□□ -0.55
SMPD3-206ENST00000566009 COL9A2Q14055 689 aaPredicted RBP11.61□□□□□ -0.55
SMPD3-206ENST00000566009 Q3C1V9 767 aa11.61□□□□□ -0.55
SMPD3-206ENST00000566009 SAMD1Q6SPF0 538 aaPredicted RBP11.61□□□□□ -0.55
SMPD3-206ENST00000566009 PLEKHH3Q7Z736 793 aa11.61□□□□□ -0.55
SMPD3-206ENST00000566009 CCAR1Q8IX12 1150 aaKnown RBP11.61□□□□□ -0.55
SMPD3-206ENST00000566009 CNTNAP3BQ96NU0 1288 aa11.61□□□□□ -0.55
SMPD3-206ENST00000566009 PRRX2Q99811 253 aa11.61□□□□□ -0.55
SMPD3-206ENST00000566009 CNTNAP3Q9BZ76 1288 aa11.61□□□□□ -0.55
SMPD3-206ENST00000566009 PORCNQ9H237 461 aa11.61□□□□□ -0.55
SMPD3-206ENST00000566009 KMT2BQ9UMN6 2715 aaPredicted RBP11.61□□□□□ -0.55
SMPD3-206ENST00000566009 ZNF521Q96K83 1311 aa11.6□□□□□ -0.55
SMPD3-206ENST00000566009 A0A0G2JMZ2 1700 aa11.6□□□□□ -0.55
SMPD3-206ENST00000566009 MYOGP15173 224 aa11.6□□□□□ -0.55
SMPD3-206ENST00000566009 CSF2RAP15509 400 aa11.6□□□□□ -0.55
SMPD3-206ENST00000566009 ATP2B2Q01814 1243 aa11.6□□□□□ -0.55
SMPD3-206ENST00000566009 LRRC41Q15345 812 aa11.6□□□□□ -0.55
SMPD3-206ENST00000566009 PSRC1Q6PGN9 363 aaPredicted RBP11.6□□□□□ -0.55
SMPD3-206ENST00000566009 METTL22Q9BUU2 404 aaPredicted RBP11.6□□□□□ -0.55
SMPD3-206ENST00000566009 GAKO14976 1311 aa11.6□□□□□ -0.55
SMPD3-206ENST00000566009 PHIPQ8WWQ0 1821 aa11.59□□□□□ -0.55
SMPD3-206ENST00000566009 CTNND1O60716 968 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms