RNA–Protein interactions for RNA: ENST00000565628.1

SPIRE2-208, Transcript of spire type actin nucleation factor 2, humanhuman

TSL 3

Gene SPIRE2, Length 505 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE2-208ENST00000565628 CCL15Q16663 113 aa17.62■□□□□ 0.41
SPIRE2-208ENST00000565628 COL13A1Q5TAT6 717 aaPredicted RBP17.62■□□□□ 0.41
SPIRE2-208ENST00000565628 TSHZ3Q63HK5 1081 aa17.62■□□□□ 0.41
SPIRE2-208ENST00000565628 B4GALNT3Q6L9W6 998 aa17.62■□□□□ 0.41
SPIRE2-208ENST00000565628 CHD1LQ86WJ1 897 aa17.62■□□□□ 0.41
SPIRE2-208ENST00000565628 TICAM2Q86XR7 235 aa17.62■□□□□ 0.41
SPIRE2-208ENST00000565628 MS4A4AQ96JQ5 239 aa17.62■□□□□ 0.41
SPIRE2-208ENST00000565628 CFHR5Q9BXR6 569 aa17.62■□□□□ 0.41
SPIRE2-208ENST00000565628 ZCCHC17Q9NP64 241 aaKnown RBP17.62■□□□□ 0.41
SPIRE2-208ENST00000565628 GINM1Q9NU53 330 aa17.62■□□□□ 0.41
SPIRE2-208ENST00000565628 SAP30BPQ9UHR5 308 aaKnown RBP17.62■□□□□ 0.41
SPIRE2-208ENST00000565628 TSKSQ9UJT2 592 aa17.62■□□□□ 0.41
SPIRE2-208ENST00000565628 ZHX2Q9Y6X8 837 aa17.62■□□□□ 0.41
SPIRE2-208ENST00000565628 THSD7BQ9C0I4 1608 aa17.61■□□□□ 0.41
SPIRE2-208ENST00000565628 RNF113AO15541 343 aaKnown RBP17.61■□□□□ 0.41
SPIRE2-208ENST00000565628 IGHDP01880 384 aa17.61■□□□□ 0.41
SPIRE2-208ENST00000565628 PTPRAP18433 802 aa17.61■□□□□ 0.41
SPIRE2-208ENST00000565628 NOM1Q5C9Z4 860 aaKnown RBP17.61■□□□□ 0.41
SPIRE2-208ENST00000565628 METTL16Q86W50 562 aaKnown RBP17.61■□□□□ 0.41
SPIRE2-208ENST00000565628 PI4K2BQ8TCG2 481 aa17.61■□□□□ 0.41
SPIRE2-208ENST00000565628 LNPKQ9C0E8 428 aa17.61■□□□□ 0.41
SPIRE2-208ENST00000565628 EHD4Q9H223 541 aa17.61■□□□□ 0.41
SPIRE2-208ENST00000565628 MCM9Q9NXL9 1143 aa17.61■□□□□ 0.41
SPIRE2-208ENST00000565628 SERPINB13Q9UIV8 391 aa17.61■□□□□ 0.41
SPIRE2-208ENST00000565628 MBD4O95243 580 aa17.6■□□□□ 0.41
SPIRE2-208ENST00000565628 ASNSP08243 561 aa17.6■□□□□ 0.41
SPIRE2-208ENST00000565628 CAP2P40123 477 aa17.6■□□□□ 0.41
SPIRE2-208ENST00000565628 PDE1AP54750 535 aa17.6■□□□□ 0.41
SPIRE2-208ENST00000565628 IRX6P78412 446 aaPredicted RBP17.6■□□□□ 0.41
SPIRE2-208ENST00000565628 FASTKD5Q7L8L6 764 aaKnown RBP17.6■□□□□ 0.41
SPIRE2-208ENST00000565628 TNS4Q8IZW8 715 aa17.6■□□□□ 0.41
SPIRE2-208ENST00000565628 OTUD7AQ8TE49 926 aaPredicted RBP17.6■□□□□ 0.41
SPIRE2-208ENST00000565628 CNKSR2Q8WXI2 1034 aa17.6■□□□□ 0.41
SPIRE2-208ENST00000565628 APPBP2Q92624 585 aa17.6■□□□□ 0.41
SPIRE2-208ENST00000565628 EVI5LQ96CN4 794 aa17.6■□□□□ 0.41
SPIRE2-208ENST00000565628 FSD1Q9BTV5 496 aa17.6■□□□□ 0.41
SPIRE2-208ENST00000565628 ARMT1Q9H993 441 aa17.6■□□□□ 0.41
SPIRE2-208ENST00000565628 TBC1D8O95759 1140 aa17.59■□□□□ 0.41
SPIRE2-208ENST00000565628 GNAT2P19087 354 aa17.59■□□□□ 0.41
SPIRE2-208ENST00000565628 LCORLQ8N3X6 602 aa17.59■□□□□ 0.41
SPIRE2-208ENST00000565628 BRI3BPQ8WY22 251 aa17.59■□□□□ 0.41
SPIRE2-208ENST00000565628 AS3MTQ9HBK9 375 aa17.59■□□□□ 0.41
SPIRE2-208ENST00000565628 ZFYVE28Q9HCC9 887 aa17.59■□□□□ 0.41
SPIRE2-208ENST00000565628 KCNH4Q9UQ05 1017 aa17.59■□□□□ 0.41
SPIRE2-208ENST00000565628 MYH2Q9UKX2 1941 aa17.59■□□□□ 0.41
SPIRE2-208ENST00000565628 IGF2BP3O00425 579 aaKnown RBP eCLIP17.58■□□□□ 0.4
SPIRE2-208ENST00000565628 DCP1AQ9NPI6 582 aaPredicted RBP17.58■□□□□ 0.4
SPIRE2-208ENST00000565628 SLC4A4Q9Y6R1 1079 aa17.58■□□□□ 0.4
SPIRE2-208ENST00000565628 AKAP11Q9UKA4 1901 aa17.57■□□□□ 0.4
SPIRE2-208ENST00000565628 SALL3Q9BXA9 1300 aa17.57■□□□□ 0.4
SPIRE2-208ENST00000565628 FAM196BA6NMK8 535 aa17.57■□□□□ 0.4
SPIRE2-208ENST00000565628 USP17L5A8MUK1 530 aa17.57■□□□□ 0.4
SPIRE2-208ENST00000565628 GPR25O00155 361 aa17.57■□□□□ 0.4
SPIRE2-208ENST00000565628 GIMAP6Q6P9H5 292 aa17.57■□□□□ 0.4
SPIRE2-208ENST00000565628 SDR42E1Q8WUS8 393 aa17.57■□□□□ 0.4
SPIRE2-208ENST00000565628 PTPN18Q99952 460 aa17.57■□□□□ 0.4
SPIRE2-208ENST00000565628 AFG3L2Q9Y4W6 797 aa17.57■□□□□ 0.4
SPIRE2-208ENST00000565628 ARHGEF6Q15052 776 aa17.56■□□□□ 0.4
SPIRE2-208ENST00000565628 TAF1CQ15572 869 aaPredicted RBP17.56■□□□□ 0.4
SPIRE2-208ENST00000565628 ANKRD23Q86SG2 305 aa17.56■□□□□ 0.4
SPIRE2-208ENST00000565628 ZNF280CQ8ND82 737 aa17.56■□□□□ 0.4
SPIRE2-208ENST00000565628 NACAP1Q9BZK3 213 aa17.56■□□□□ 0.4
SPIRE2-208ENST00000565628 PUS7LQ9H0K6 701 aaKnown RBP17.56■□□□□ 0.4
SPIRE2-208ENST00000565628 CABP5Q9NP86 173 aa17.56■□□□□ 0.4
SPIRE2-208ENST00000565628 SWAP70Q9UH65 585 aa17.56■□□□□ 0.4
SPIRE2-208ENST00000565628 TRIM75PA6NK02 468 aa17.55■□□□□ 0.4
SPIRE2-208ENST00000565628 FKTNO75072 461 aa17.55■□□□□ 0.4
SPIRE2-208ENST00000565628 SLC4A8Q2Y0W8 1093 aa17.55■□□□□ 0.4
SPIRE2-208ENST00000565628 CERKLQ49MI3 558 aaPredicted RBP17.55■□□□□ 0.4
SPIRE2-208ENST00000565628 TATDN1Q6P1N9 297 aa17.55■□□□□ 0.4
SPIRE2-208ENST00000565628 STRBPQ96SI9 672 aaKnown RBP17.55■□□□□ 0.4
SPIRE2-208ENST00000565628 OSBPL3Q9H4L5 887 aa17.55■□□□□ 0.4
SPIRE2-208ENST00000565628 A0A0G2JLL6 359 aaPredicted RBP17.54■□□□□ 0.4
SPIRE2-208ENST00000565628 TRIM6-TRIM34B2RNG4 842 aa17.54■□□□□ 0.4
SPIRE2-208ENST00000565628 BTBD19C9JJ37 291 aa17.54■□□□□ 0.4
SPIRE2-208ENST00000565628 APPP05067 770 aa17.54■□□□□ 0.4
SPIRE2-208ENST00000565628 CRHR2Q13324 411 aa17.54■□□□□ 0.4
SPIRE2-208ENST00000565628 PRRT2Q7Z6L0 340 aaPredicted RBP17.54■□□□□ 0.4
SPIRE2-208ENST00000565628 FAM43AQ8N2R8 423 aa17.54■□□□□ 0.4
SPIRE2-208ENST00000565628 OSBP2Q969R2 916 aa17.54■□□□□ 0.4
SPIRE2-208ENST00000565628 ARPP21Q9UBL0 812 aaPredicted RBP17.54■□□□□ 0.4
SPIRE2-208ENST00000565628 MAST2Q6P0Q8 1798 aa17.53■□□□□ 0.4
SPIRE2-208ENST00000565628 C19orf81C9J6K1 198 aa17.53■□□□□ 0.4
SPIRE2-208ENST00000565628 USP17L12C9JPN9 530 aa17.53■□□□□ 0.4
SPIRE2-208ENST00000565628 USP17L21D6R901 530 aa17.53■□□□□ 0.4
SPIRE2-208ENST00000565628 GPAA1O43292 621 aa17.53■□□□□ 0.4
SPIRE2-208ENST00000565628 PRKAB2O43741 272 aa17.53■□□□□ 0.4
SPIRE2-208ENST00000565628 SLURP2P0DP57 97 aa17.53■□□□□ 0.4
SPIRE2-208ENST00000565628 PLCD1P51178 756 aa17.53■□□□□ 0.4
SPIRE2-208ENST00000565628 SPP2Q13103 211 aa17.53■□□□□ 0.4
SPIRE2-208ENST00000565628 PABPC4Q13310 644 aaKnown RBP eCLIP17.53■□□□□ 0.4
SPIRE2-208ENST00000565628 PKN2Q16513 984 aaKnown RBP17.53■□□□□ 0.4
SPIRE2-208ENST00000565628 SLFNL1Q499Z3 407 aa17.53■□□□□ 0.4
SPIRE2-208ENST00000565628 PLEKHM2Q8IWE5 1019 aa17.53■□□□□ 0.4
SPIRE2-208ENST00000565628 ZNF296Q8WUU4 475 aaPredicted RBP17.53■□□□□ 0.4
SPIRE2-208ENST00000565628 WDR18Q9BV38 432 aa17.53■□□□□ 0.4
SPIRE2-208ENST00000565628 DNAJC18Q9H819 358 aa17.53■□□□□ 0.4
SPIRE2-208ENST00000565628 ZNF287Q9HBT7 754 aa17.53■□□□□ 0.4
SPIRE2-208ENST00000565628 SLC45A1Q9Y2W3 748 aa17.53■□□□□ 0.4
SPIRE2-208ENST00000565628 PATL2C9JE40 543 aaKnown RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms