RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 ANTXR1Q9H6X2 564 aa19.14■□□□□ 0.65
CDH3-204ENST00000565453 IL1RAPL2Q9NP60 686 aa19.14■□□□□ 0.65
CDH3-204ENST00000565453 NDUFB9Q9Y6M9 179 aa19.14■□□□□ 0.65
CDH3-204ENST00000565453 FLT1P17948 1338 aa19.14■□□□□ 0.65
CDH3-204ENST00000565453 BCRP11274 1271 aa19.13■□□□□ 0.65
CDH3-204ENST00000565453 CYP7A1P22680 504 aa19.13■□□□□ 0.65
CDH3-204ENST00000565453 DYNLL1P63167 89 aaKnown RBP19.13■□□□□ 0.65
CDH3-204ENST00000565453 METTL16Q86W50 562 aaKnown RBP19.13■□□□□ 0.65
CDH3-204ENST00000565453 MAPKAPK5Q8IW41 473 aa19.13■□□□□ 0.65
CDH3-204ENST00000565453 PARK7Q99497 189 aaKnown RBP19.13■□□□□ 0.65
CDH3-204ENST00000565453 DHX36Q9H2U1 1008 aaKnown RBP19.13■□□□□ 0.65
CDH3-204ENST00000565453 PI4KBQ9UBF8 816 aa19.13■□□□□ 0.65
CDH3-204ENST00000565453 HERC5Q9UII4 1024 aaKnown RBP19.13■□□□□ 0.65
CDH3-204ENST00000565453 SLC45A1Q9Y2W3 748 aa19.13■□□□□ 0.65
CDH3-204ENST00000565453 RBBP6Q7Z6E9 1792 aaKnown RBP19.13■□□□□ 0.65
CDH3-204ENST00000565453 HTTP42858 3142 aa19.12■□□□□ 0.65
CDH3-204ENST00000565453 POTEFA5A3E0 1075 aa19.12■□□□□ 0.65
CDH3-204ENST00000565453 IDH1O75874 414 aaKnown RBP19.12■□□□□ 0.65
CDH3-204ENST00000565453 GNRH1P01148 92 aa19.12■□□□□ 0.65
CDH3-204ENST00000565453 CYP2C8P10632 490 aa19.12■□□□□ 0.65
CDH3-204ENST00000565453 CAP2P40123 477 aa19.12■□□□□ 0.65
CDH3-204ENST00000565453 KIF22Q14807 665 aa19.12■□□□□ 0.65
CDH3-204ENST00000565453 C20orf194Q5TEA3 1177 aa19.12■□□□□ 0.65
CDH3-204ENST00000565453 DNAJC18Q9H819 358 aa19.12■□□□□ 0.65
CDH3-204ENST00000565453 ATAD5Q96QE3 1844 aa19.11■□□□□ 0.65
CDH3-204ENST00000565453 TRIM75PA6NK02 468 aa19.11■□□□□ 0.65
CDH3-204ENST00000565453 HMMRO75330 724 aa19.11■□□□□ 0.65
CDH3-204ENST00000565453 GADL1Q6ZQY3 521 aa19.11■□□□□ 0.65
CDH3-204ENST00000565453 KIF1BPQ96EK5 621 aa19.11■□□□□ 0.65
CDH3-204ENST00000565453 ZNF333Q96JL9 665 aa19.11■□□□□ 0.65
CDH3-204ENST00000565453 TRIM47Q96LD4 638 aa19.11■□□□□ 0.65
CDH3-204ENST00000565453 PDE3AQ14432 1141 aa19.1■□□□□ 0.65
CDH3-204ENST00000565453 MAGEB6Q8N7X4 407 aa19.1■□□□□ 0.65
CDH3-204ENST00000565453 CHMP4BQ9H444 224 aaKnown RBP19.1■□□□□ 0.65
CDH3-204ENST00000565453 LOC285556D6RIA3 1793 aa19.09■□□□□ 0.65
CDH3-204ENST00000565453 RAB11FIP3O75154 756 aa19.09■□□□□ 0.65
CDH3-204ENST00000565453 PSMC4P43686 418 aa19.09■□□□□ 0.65
CDH3-204ENST00000565453 PRMT2P55345 433 aa19.09■□□□□ 0.65
CDH3-204ENST00000565453 TMED8Q6PL24 325 aaPredicted RBP19.09■□□□□ 0.65
CDH3-204ENST00000565453 FOXP4Q8IVH2 680 aaPredicted RBP19.09■□□□□ 0.65
CDH3-204ENST00000565453 CLASRPQ8N2M8 674 aaKnown RBP19.09■□□□□ 0.65
CDH3-204ENST00000565453 ZNF280CQ8ND82 737 aa19.09■□□□□ 0.65
CDH3-204ENST00000565453 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.09■□□□□ 0.65
CDH3-204ENST00000565453 TBC1D2Q9BYX2 928 aa19.09■□□□□ 0.65
CDH3-204ENST00000565453 PALD1Q9ULE6 856 aa19.09■□□□□ 0.65
CDH3-204ENST00000565453 AGTPBP1Q9UPW5 1226 aa19.09■□□□□ 0.65
CDH3-204ENST00000565453 TNRC18O15417 2968 aaPredicted RBP19.09■□□□□ 0.65
CDH3-204ENST00000565453 USP17L5A8MUK1 530 aa19.08■□□□□ 0.64
CDH3-204ENST00000565453 APBB1O00213 710 aa19.08■□□□□ 0.64
CDH3-204ENST00000565453 ECM2O94769 699 aaPredicted RBP19.08■□□□□ 0.64
CDH3-204ENST00000565453 JAG1P78504 1218 aa19.08■□□□□ 0.64
CDH3-204ENST00000565453 MAP3K12Q12852 859 aa19.08■□□□□ 0.64
CDH3-204ENST00000565453 SPP2Q13103 211 aa19.08■□□□□ 0.64
CDH3-204ENST00000565453 SLC9C1Q4G0N8 1177 aa19.08■□□□□ 0.64
CDH3-204ENST00000565453 TREML2Q5T2D2 321 aa19.08■□□□□ 0.64
CDH3-204ENST00000565453 CERS3Q8IU89 383 aa19.08■□□□□ 0.64
CDH3-204ENST00000565453 MIGA1Q8NAN2 632 aa19.08■□□□□ 0.64
CDH3-204ENST00000565453 PROCA1Q8NCQ7 364 aaPredicted RBP19.08■□□□□ 0.64
CDH3-204ENST00000565453 SRRDQ9UH36 339 aa19.08■□□□□ 0.64
CDH3-204ENST00000565453 OSBPP22059 807 aa19.07■□□□□ 0.64
CDH3-204ENST00000565453 SH3D19Q5HYK7 790 aa19.07■□□□□ 0.64
CDH3-204ENST00000565453 RIOK1Q9BRS2 568 aaKnown RBP19.07■□□□□ 0.64
CDH3-204ENST00000565453 SAP30BPQ9UHR5 308 aaKnown RBP19.07■□□□□ 0.64
CDH3-204ENST00000565453 IFIT2P09913 472 aaKnown RBP19.06■□□□□ 0.64
CDH3-204ENST00000565453 TTF1Q15361 905 aaPredicted RBP19.06■□□□□ 0.64
CDH3-204ENST00000565453 SHROOM1Q2M3G4 852 aaPredicted RBP19.06■□□□□ 0.64
CDH3-204ENST00000565453 NBPF11Q86T75 865 aa19.06■□□□□ 0.64
CDH3-204ENST00000565453 SH3TC2Q8TF17 1288 aa19.06■□□□□ 0.64
CDH3-204ENST00000565453 WDR18Q9BV38 432 aa19.06■□□□□ 0.64
CDH3-204ENST00000565453 MGAMO43451 1857 aa19.05■□□□□ 0.64
CDH3-204ENST00000565453 FMNL1O95466 1100 aaPredicted RBP19.05■□□□□ 0.64
CDH3-204ENST00000565453 EN2P19622 333 aaPredicted RBP19.05■□□□□ 0.64
CDH3-204ENST00000565453 HOXD10P28358 340 aa19.05■□□□□ 0.64
CDH3-204ENST00000565453 HMGCS2P54868 508 aa19.05■□□□□ 0.64
CDH3-204ENST00000565453 AS3MTQ9HBK9 375 aa19.05■□□□□ 0.64
CDH3-204ENST00000565453 MYH1P12882 1939 aa19.05■□□□□ 0.64
CDH3-204ENST00000565453 DDX60LQ5H9U9 1706 aaKnown RBP19.05■□□□□ 0.64
CDH3-204ENST00000565453 MYPNQ86TC9 1320 aa19.04■□□□□ 0.64
CDH3-204ENST00000565453 HLA-DOAP06340 250 aa19.04■□□□□ 0.64
CDH3-204ENST00000565453 ASNSP08243 561 aa19.04■□□□□ 0.64
CDH3-204ENST00000565453 PDE6AP16499 860 aa19.04■□□□□ 0.64
CDH3-204ENST00000565453 FCGRTP55899 365 aa19.04■□□□□ 0.64
CDH3-204ENST00000565453 CRACR2BQ8N4Y2 399 aaPredicted RBP19.04■□□□□ 0.64
CDH3-204ENST00000565453 GINM1Q9NU53 330 aa19.04■□□□□ 0.64
CDH3-204ENST00000565453 TCRBV5S4A2TA0A5A2 114 aa19.03■□□□□ 0.64
CDH3-204ENST00000565453 GOLIM4O00461 696 aa19.03■□□□□ 0.64
CDH3-204ENST00000565453 GDF11O95390 407 aa19.03■□□□□ 0.64
CDH3-204ENST00000565453 USP5P45974 858 aa19.03■□□□□ 0.64
CDH3-204ENST00000565453 PRKCZQ05513 592 aa19.03■□□□□ 0.64
CDH3-204ENST00000565453 SLC4A8Q2Y0W8 1093 aa19.03■□□□□ 0.64
CDH3-204ENST00000565453 SMCR8Q8TEV9 937 aaPredicted RBP19.03■□□□□ 0.64
CDH3-204ENST00000565453 EDC3Q96F86 508 aaKnown RBP19.03■□□□□ 0.64
CDH3-204ENST00000565453 DNAJC2Q99543 621 aaKnown RBP19.03■□□□□ 0.64
CDH3-204ENST00000565453 TMEM106CQ9BVX2 250 aa19.03■□□□□ 0.64
CDH3-204ENST00000565453 EHD4Q9H223 541 aa19.03■□□□□ 0.64
CDH3-204ENST00000565453 PNMA3Q9UL41 463 aa19.03■□□□□ 0.64
CDH3-204ENST00000565453 ZBTB21Q9ULJ3 1066 aa19.03■□□□□ 0.64
CDH3-204ENST00000565453 PDE4DIPQ5VU43 2346 aa19.03■□□□□ 0.64
CDH3-204ENST00000565453 ATP5JP18859 108 aa19.02■□□□□ 0.64
CDH3-204ENST00000565453 BACE1P56817 501 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms