RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 RUFY2Q8WXA3 655 aa19.99■□□□□ 0.79
RNF40-206ENST00000564260 SLC10A4Q96EP9 437 aa19.99■□□□□ 0.79
RNF40-206ENST00000564260 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.99■□□□□ 0.79
RNF40-206ENST00000564260 SWAP70Q9UH65 585 aa19.99■□□□□ 0.79
RNF40-206ENST00000564260 PALD1Q9ULE6 856 aa19.99■□□□□ 0.79
RNF40-206ENST00000564260 ZMYM6O95789 1325 aa19.99■□□□□ 0.79
RNF40-206ENST00000564260 M0R2C6 588 aa19.98■□□□□ 0.79
RNF40-206ENST00000564260 CHGBP05060 677 aa19.98■□□□□ 0.79
RNF40-206ENST00000564260 SLFNL1Q499Z3 407 aa19.98■□□□□ 0.79
RNF40-206ENST00000564260 MIGA2Q7L4E1 593 aa19.98■□□□□ 0.79
RNF40-206ENST00000564260 RASAL3Q86YV0 1011 aa19.98■□□□□ 0.79
RNF40-206ENST00000564260 JMYQ8N9B5 988 aa19.98■□□□□ 0.79
RNF40-206ENST00000564260 THSD7BQ9C0I4 1608 aa19.98■□□□□ 0.79
RNF40-206ENST00000564260 CDK5RAP2Q96SN8 1893 aa19.97■□□□□ 0.79
RNF40-206ENST00000564260 GSG1L2A8MUP6 293 aa19.97■□□□□ 0.79
RNF40-206ENST00000564260 VEGFBP49765 207 aa19.97■□□□□ 0.79
RNF40-206ENST00000564260 INHBEP58166 350 aa19.97■□□□□ 0.79
RNF40-206ENST00000564260 HTRA3P83110 453 aa19.97■□□□□ 0.79
RNF40-206ENST00000564260 PRKG1Q13976 671 aa19.97■□□□□ 0.79
RNF40-206ENST00000564260 VGLL4Q14135 290 aa19.97■□□□□ 0.79
RNF40-206ENST00000564260 ALX1Q15699 326 aa19.97■□□□□ 0.79
RNF40-206ENST00000564260 MOB2Q70IA6 237 aa19.97■□□□□ 0.79
RNF40-206ENST00000564260 ERO1BQ86YB8 467 aa19.97■□□□□ 0.79
RNF40-206ENST00000564260 CCDC171Q6TFL3 1326 aa19.97■□□□□ 0.79
RNF40-206ENST00000564260 SPDYE5A6NIY4 337 aa19.96■□□□□ 0.79
RNF40-206ENST00000564260 FAM155AB1AL88 458 aaPredicted RBP19.96■□□□□ 0.79
RNF40-206ENST00000564260 PPATQ06203 517 aa19.96■□□□□ 0.79
RNF40-206ENST00000564260 GABPAQ06546 454 aa19.96■□□□□ 0.79
RNF40-206ENST00000564260 NMIQ13287 307 aaPredicted RBP19.96■□□□□ 0.79
RNF40-206ENST00000564260 C12orf60Q5U649 245 aa19.96■□□□□ 0.79
RNF40-206ENST00000564260 CYP4F22Q6NT55 531 aa19.96■□□□□ 0.79
RNF40-206ENST00000564260 TATDN1Q6P1N9 297 aa19.96■□□□□ 0.79
RNF40-206ENST00000564260 PAXIP1Q6ZW49 1069 aaPredicted RBP19.96■□□□□ 0.79
RNF40-206ENST00000564260 SCYL3Q8IZE3 742 aa19.96■□□□□ 0.79
RNF40-206ENST00000564260 ZNF287Q9HBT7 754 aa19.96■□□□□ 0.79
RNF40-206ENST00000564260 NAV1Q8NEY1 1877 aa19.95■□□□□ 0.78
RNF40-206ENST00000564260 A0A0D9SFI3 127 aa19.95■□□□□ 0.78
RNF40-206ENST00000564260 PRKAB2O43741 272 aa19.95■□□□□ 0.78
RNF40-206ENST00000564260 NT5C2P49902 561 aa19.95■□□□□ 0.78
RNF40-206ENST00000564260 SPRYD7Q5W111 196 aa19.95■□□□□ 0.78
RNF40-206ENST00000564260 FAM227BQ96M60 508 aa19.95■□□□□ 0.78
RNF40-206ENST00000564260 SEC62Q99442 399 aaKnown RBP19.95■□□□□ 0.78
RNF40-206ENST00000564260 PICK1Q9NRD5 415 aa19.95■□□□□ 0.78
RNF40-206ENST00000564260 SAP30BPQ9UHR5 308 aaKnown RBP19.95■□□□□ 0.78
RNF40-206ENST00000564260 SNCAIPQ9Y6H5 919 aa19.95■□□□□ 0.78
RNF40-206ENST00000564260 ROBO3Q96MS0 1386 aa19.95■□□□□ 0.78
RNF40-206ENST00000564260 USP17L12C9JPN9 530 aa19.94■□□□□ 0.78
RNF40-206ENST00000564260 USP17L21D6R901 530 aa19.94■□□□□ 0.78
RNF40-206ENST00000564260 APPP05067 770 aa19.94■□□□□ 0.78
RNF40-206ENST00000564260 ASNSP08243 561 aa19.94■□□□□ 0.78
RNF40-206ENST00000564260 TDO2P48775 406 aa19.94■□□□□ 0.78
RNF40-206ENST00000564260 MAP2K1Q02750 393 aaPredicted RBP19.94■□□□□ 0.78
RNF40-206ENST00000564260 SREBF2Q12772 1141 aa19.94■□□□□ 0.78
RNF40-206ENST00000564260 CTR9Q6PD62 1173 aa19.94■□□□□ 0.78
RNF40-206ENST00000564260 IFNL3Q8IZI9 196 aa19.94■□□□□ 0.78
RNF40-206ENST00000564260 WNK4Q96J92 1243 aa19.94■□□□□ 0.78
RNF40-206ENST00000564260 NAPBQ9H115 298 aa19.94■□□□□ 0.78
RNF40-206ENST00000564260 MANSC4A6NHS7 340 aaPredicted RBP19.93■□□□□ 0.78
RNF40-206ENST00000564260 SLC3A2P08195 630 aaKnown RBP19.93■□□□□ 0.78
RNF40-206ENST00000564260 CHMLP26374 656 aa19.93■□□□□ 0.78
RNF40-206ENST00000564260 INPP5BP32019 993 aa19.93■□□□□ 0.78
RNF40-206ENST00000564260 CAP2P40123 477 aa19.93■□□□□ 0.78
RNF40-206ENST00000564260 PLCD1P51178 756 aa19.93■□□□□ 0.78
RNF40-206ENST00000564260 PPIL2Q13356 520 aa19.93■□□□□ 0.78
RNF40-206ENST00000564260 CWC27Q6UX04 472 aaKnown RBP19.93■□□□□ 0.78
RNF40-206ENST00000564260 CA12O43570 354 aa19.92■□□□□ 0.78
RNF40-206ENST00000564260 CASC1Q6TDU7 716 aa19.92■□□□□ 0.78
RNF40-206ENST00000564260 C16orf86Q6ZW13 317 aa19.92■□□□□ 0.78
RNF40-206ENST00000564260 ZKSCAN4Q969J2 545 aaPredicted RBP19.92■□□□□ 0.78
RNF40-206ENST00000564260 OPTNQ96CV9 577 aa19.92■□□□□ 0.78
RNF40-206ENST00000564260 CLMNQ96JQ2 1002 aa19.92■□□□□ 0.78
RNF40-206ENST00000564260 CCDC17Q96LX7 622 aa19.92■□□□□ 0.78
RNF40-206ENST00000564260 DSCC1Q9BVC3 393 aa19.92■□□□□ 0.78
RNF40-206ENST00000564260 DNAJC18Q9H819 358 aa19.92■□□□□ 0.78
RNF40-206ENST00000564260 ELP3Q9H9T3 547 aa19.92■□□□□ 0.78
RNF40-206ENST00000564260 EPB41L4AQ9HCS5 686 aaPredicted RBP19.92■□□□□ 0.78
RNF40-206ENST00000564260 FZD1Q9UP38 647 aa19.92■□□□□ 0.78
RNF40-206ENST00000564260 MYH1P12882 1939 aa19.92■□□□□ 0.78
RNF40-206ENST00000564260 AK9Q5TCS8 1911 aa19.92■□□□□ 0.78
RNF40-206ENST00000564260 CXCL11O14625 94 aa19.91■□□□□ 0.78
RNF40-206ENST00000564260 HSPD1P10809 573 aaKnown RBP19.91■□□□□ 0.78
RNF40-206ENST00000564260 PCP11498 1178 aaKnown RBP19.91■□□□□ 0.78
RNF40-206ENST00000564260 GTF2A2P52657 109 aa19.91■□□□□ 0.78
RNF40-206ENST00000564260 ANAPC4Q9UJX5 808 aa19.91■□□□□ 0.78
RNF40-206ENST00000564260 OTOFQ9HC10 1997 aa19.91■□□□□ 0.78
RNF40-206ENST00000564260 TESPA1A2RU30 521 aaPredicted RBP19.9■□□□□ 0.78
RNF40-206ENST00000564260 PTPRAP18433 802 aa19.9■□□□□ 0.78
RNF40-206ENST00000564260 SHMT1P34896 483 aa19.9■□□□□ 0.78
RNF40-206ENST00000564260 CERKLQ49MI3 558 aaPredicted RBP19.9■□□□□ 0.78
RNF40-206ENST00000564260 AS3MTQ9HBK9 375 aa19.9■□□□□ 0.78
RNF40-206ENST00000564260 ZCCHC17Q9NP64 241 aaKnown RBP19.9■□□□□ 0.78
RNF40-206ENST00000564260 KCNH4Q9UQ05 1017 aa19.9■□□□□ 0.78
RNF40-206ENST00000564260 SIPA1L1O43166 1804 aa19.9■□□□□ 0.78
RNF40-206ENST00000564260 FOXP2O15409 715 aa19.89■□□□□ 0.77
RNF40-206ENST00000564260 LAMB1P07942 1786 aa19.89■□□□□ 0.77
RNF40-206ENST00000564260 TM4SF4P48230 202 aa19.89■□□□□ 0.77
RNF40-206ENST00000564260 PDE4BQ07343 736 aa19.89■□□□□ 0.77
RNF40-206ENST00000564260 ZNF589Q86UQ0 364 aaPredicted RBP19.89■□□□□ 0.77
RNF40-206ENST00000564260 CABP5Q9NP86 173 aa19.89■□□□□ 0.77
RNF40-206ENST00000564260 CTNNA3Q9UI47 895 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms