RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 RASSF8Q8NHQ8 419 aa13.48□□□□□ -0.25
ABCA3-203ENST00000563623 WASF1Q92558 559 aa13.48□□□□□ -0.25
ABCA3-203ENST00000563623 HSD3B7Q9H2F3 369 aa13.48□□□□□ -0.25
ABCA3-203ENST00000563623 NEDD4P46934 1319 aa13.48□□□□□ -0.25
ABCA3-203ENST00000563623 PDE6AP16499 860 aa13.47□□□□□ -0.25
ABCA3-203ENST00000563623 TCIRG1Q13488 830 aa13.47□□□□□ -0.25
ABCA3-203ENST00000563623 CC2D1AQ6P1N0 951 aaPredicted RBP13.47□□□□□ -0.25
ABCA3-203ENST00000563623 USP49Q70CQ1 688 aa13.47□□□□□ -0.25
ABCA3-203ENST00000563623 CCDC102AQ96A19 550 aa13.47□□□□□ -0.25
ABCA3-203ENST00000563623 AK7Q96M32 723 aa13.47□□□□□ -0.25
ABCA3-203ENST00000563623 GREM2Q9H772 168 aa13.47□□□□□ -0.25
ABCA3-203ENST00000563623 PCDHB6Q9Y5E3 794 aa13.47□□□□□ -0.25
ABCA3-203ENST00000563623 RANBP6O60518 1105 aaKnown RBP13.47□□□□□ -0.25
ABCA3-203ENST00000563623 ADD2P35612 726 aa13.47□□□□□ -0.25
ABCA3-203ENST00000563623 EVA1CP58658 441 aa13.47□□□□□ -0.25
ABCA3-203ENST00000563623 GPR161Q8N6U8 529 aaKnown RBP13.47□□□□□ -0.25
ABCA3-203ENST00000563623 UBAC1Q9BSL1 405 aa13.47□□□□□ -0.25
ABCA3-203ENST00000563623 ZSWIM5Q9P217 1185 aa13.47□□□□□ -0.25
ABCA3-203ENST00000563623 TEX33O43247 280 aa13.47□□□□□ -0.25
ABCA3-203ENST00000563623 CHMP4BP1P59074 171 aa13.47□□□□□ -0.25
ABCA3-203ENST00000563623 TMEM87BQ96K49 555 aa13.47□□□□□ -0.25
ABCA3-203ENST00000563623 UBN2Q6ZU65 1347 aa13.47□□□□□ -0.25
ABCA3-203ENST00000563623 MEGF6O75095 1541 aa13.47□□□□□ -0.25
ABCA3-203ENST00000563623 STX10O60499 249 aa13.46□□□□□ -0.25
ABCA3-203ENST00000563623 CYP2C19P33261 490 aa13.46□□□□□ -0.25
ABCA3-203ENST00000563623 KCNJ6P48051 423 aa13.46□□□□□ -0.25
ABCA3-203ENST00000563623 TTF1Q15361 905 aaPredicted RBP13.46□□□□□ -0.25
ABCA3-203ENST00000563623 MLKLQ8NB16 471 aa13.46□□□□□ -0.25
ABCA3-203ENST00000563623 KCND1Q9NSA2 647 aa13.46□□□□□ -0.25
ABCA3-203ENST00000563623 INTS13Q9NVM9 706 aa13.46□□□□□ -0.25
ABCA3-203ENST00000563623 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.46□□□□□ -0.25
ABCA3-203ENST00000563623 VPS18Q9P253 973 aa13.46□□□□□ -0.25
ABCA3-203ENST00000563623 HPSEQ9Y251 543 aa13.46□□□□□ -0.25
ABCA3-203ENST00000563623 BMP6P22004 513 aa13.46□□□□□ -0.25
ABCA3-203ENST00000563623 DNAJC10Q8IXB1 793 aa13.46□□□□□ -0.25
ABCA3-203ENST00000563623 OVOS2A0A0G2JMS6 1433 aa13.46□□□□□ -0.25
ABCA3-203ENST00000563623 PRKAB2O43741 272 aa13.46□□□□□ -0.26
ABCA3-203ENST00000563623 MYCNP04198 464 aaPredicted RBP13.46□□□□□ -0.26
ABCA3-203ENST00000563623 TXLNBQ8N3L3 684 aa13.46□□□□□ -0.26
ABCA3-203ENST00000563623 TC2NQ8N9U0 490 aa13.46□□□□□ -0.26
ABCA3-203ENST00000563623 ABCF2Q9UG63 623 aa13.46□□□□□ -0.26
ABCA3-203ENST00000563623 FANCGO15287 622 aa13.45□□□□□ -0.26
ABCA3-203ENST00000563623 SASH3O75995 380 aa13.45□□□□□ -0.26
ABCA3-203ENST00000563623 LMO7Q8WWI1 1683 aa13.45□□□□□ -0.26
ABCA3-203ENST00000563623 CSRNP2Q9H175 543 aa13.45□□□□□ -0.26
ABCA3-203ENST00000563623 MRPL44Q9H9J2 332 aaKnown RBP13.45□□□□□ -0.26
ABCA3-203ENST00000563623 LRP2BPQ9P2M1 347 aa13.45□□□□□ -0.26
ABCA3-203ENST00000563623 MAPK8IP1Q9UQF2 711 aa13.45□□□□□ -0.26
ABCA3-203ENST00000563623 SLC4A4Q9Y6R1 1079 aa13.45□□□□□ -0.26
ABCA3-203ENST00000563623 N4BP3O15049 544 aa13.45□□□□□ -0.26
ABCA3-203ENST00000563623 MAP3K12Q12852 859 aa13.45□□□□□ -0.26
ABCA3-203ENST00000563623 LONRF2Q1L5Z9 754 aa13.45□□□□□ -0.26
ABCA3-203ENST00000563623 HSP90B2PQ58FF3 399 aa13.45□□□□□ -0.26
ABCA3-203ENST00000563623 GPATCH11Q8N954 259 aa13.45□□□□□ -0.26
ABCA3-203ENST00000563623 OXER1Q8TDS5 423 aa13.45□□□□□ -0.26
ABCA3-203ENST00000563623 NUP88Q99567 741 aaPredicted RBP13.45□□□□□ -0.26
ABCA3-203ENST00000563623 NACAP1Q9BZK3 213 aa13.45□□□□□ -0.26
ABCA3-203ENST00000563623 TMOD3Q9NYL9 352 aa13.45□□□□□ -0.26
ABCA3-203ENST00000563623 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.45□□□□□ -0.26
ABCA3-203ENST00000563623 RBL2Q08999 1139 aa13.45□□□□□ -0.26
ABCA3-203ENST00000563623 FCHSD1Q86WN1 690 aa13.45□□□□□ -0.26
ABCA3-203ENST00000563623 MAP3K14Q99558 947 aa13.45□□□□□ -0.26
ABCA3-203ENST00000563623 VPS16Q9H269 839 aa13.45□□□□□ -0.26
ABCA3-203ENST00000563623 CPDO75976 1380 aa13.44□□□□□ -0.26
ABCA3-203ENST00000563623 PRDM1O75626 825 aa13.44□□□□□ -0.26
ABCA3-203ENST00000563623 TBC1D8O95759 1140 aa13.44□□□□□ -0.26
ABCA3-203ENST00000563623 WWC2Q6AWC2 1192 aa13.44□□□□□ -0.26
ABCA3-203ENST00000563623 IFNL3Q8IZI9 196 aa13.44□□□□□ -0.26
ABCA3-203ENST00000563623 NBPF3Q9H094 633 aa13.44□□□□□ -0.26
ABCA3-203ENST00000563623 LY9Q9HBG7 655 aa13.44□□□□□ -0.26
ABCA3-203ENST00000563623 VPS54Q9P1Q0 977 aa13.44□□□□□ -0.26
ABCA3-203ENST00000563623 CEP131Q9UPN4 1083 aa13.44□□□□□ -0.26
ABCA3-203ENST00000563623 MTMR7Q9Y216 660 aa13.44□□□□□ -0.26
ABCA3-203ENST00000563623 A0A0U1RQJ8 604 aa13.44□□□□□ -0.26
ABCA3-203ENST00000563623 IRS4O14654 1257 aaPredicted RBP13.44□□□□□ -0.26
ABCA3-203ENST00000563623 ZNF174Q15697 407 aa13.44□□□□□ -0.26
ABCA3-203ENST00000563623 RILPL1Q5EBL4 403 aa13.44□□□□□ -0.26
ABCA3-203ENST00000563623 C10orf67Q8IYJ2 551 aa13.44□□□□□ -0.26
ABCA3-203ENST00000563623 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.44□□□□□ -0.26
ABCA3-203ENST00000563623 ATRIPQ8WXE1 791 aa13.44□□□□□ -0.26
ABCA3-203ENST00000563623 EPSTI1Q96J88 318 aa13.44□□□□□ -0.26
ABCA3-203ENST00000563623 TRIM75PA6NK02 468 aa13.44□□□□□ -0.26
ABCA3-203ENST00000563623 ERLIN1O75477 346 aa13.44□□□□□ -0.26
ABCA3-203ENST00000563623 ZRANB2O95218 330 aaKnown RBP eCLIP13.44□□□□□ -0.26
ABCA3-203ENST00000563623 TFRCP02786 760 aaKnown RBP13.44□□□□□ -0.26
ABCA3-203ENST00000563623 XBP1P17861 261 aa13.44□□□□□ -0.26
ABCA3-203ENST00000563623 MAP3K9P80192 1104 aa13.44□□□□□ -0.26
ABCA3-203ENST00000563623 LEKR1Q6ZMV7 388 aa13.44□□□□□ -0.26
ABCA3-203ENST00000563623 MRFAP1Q9Y605 127 aa13.44□□□□□ -0.26
ABCA3-203ENST00000563623 FAM205CA6NFA0 338 aa13.43□□□□□ -0.26
ABCA3-203ENST00000563623 ACRBPQ8NEB7 543 aa13.43□□□□□ -0.26
ABCA3-203ENST00000563623 IGDCC4Q8TDY8 1250 aa13.43□□□□□ -0.26
ABCA3-203ENST00000563623 RABGGTAQ92696 567 aa13.43□□□□□ -0.26
ABCA3-203ENST00000563623 CDC5LQ99459 802 aaKnown RBP13.43□□□□□ -0.26
ABCA3-203ENST00000563623 BLZF1Q9H2G9 400 aa13.43□□□□□ -0.26
ABCA3-203ENST00000563623 PDE11AQ9HCR9 933 aa13.43□□□□□ -0.26
ABCA3-203ENST00000563623 ATG3Q9NT62 314 aa13.43□□□□□ -0.26
ABCA3-203ENST00000563623 SYNRGQ9UMZ2 1314 aa13.43□□□□□ -0.26
ABCA3-203ENST00000563623 MMP1P03956 469 aa13.43□□□□□ -0.26
ABCA3-203ENST00000563623 CASP14P31944 242 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms