RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.43■■□□□ 1.18
RAB40C-207ENST00000563109 GBA2Q9HCG7 927 aaPredicted RBP22.43■■□□□ 1.18
RAB40C-207ENST00000563109 CTNNA3Q9UI47 895 aa22.43■■□□□ 1.18
RAB40C-207ENST00000563109 SERPINB13Q9UIV8 391 aa22.43■■□□□ 1.18
RAB40C-207ENST00000563109 EIF5BO60841 1220 aaKnown RBP22.42■■□□□ 1.18
RAB40C-207ENST00000563109 SLC3A2P08195 630 aaKnown RBP22.42■■□□□ 1.18
RAB40C-207ENST00000563109 PRKG1Q13976 671 aa22.42■■□□□ 1.18
RAB40C-207ENST00000563109 C12orf60Q5U649 245 aa22.42■■□□□ 1.18
RAB40C-207ENST00000563109 MIGA2Q7L4E1 593 aa22.42■■□□□ 1.18
RAB40C-207ENST00000563109 TAOK2Q9UL54 1235 aa22.42■■□□□ 1.18
RAB40C-207ENST00000563109 OTOFQ9HC10 1997 aa22.41■■□□□ 1.18
RAB40C-207ENST00000563109 CYP2D7A0A087X1C5 515 aa22.41■■□□□ 1.18
RAB40C-207ENST00000563109 TBC1D12O60347 775 aa22.41■■□□□ 1.18
RAB40C-207ENST00000563109 REC8O95072 547 aa22.41■■□□□ 1.18
RAB40C-207ENST00000563109 FGAP02671 866 aa22.41■■□□□ 1.18
RAB40C-207ENST00000563109 IREB2P48200 963 aaKnown RBP22.41■■□□□ 1.18
RAB40C-207ENST00000563109 PLCD1P51178 756 aa22.41■■□□□ 1.18
RAB40C-207ENST00000563109 ANGEL1Q9UNK9 670 aaKnown RBP22.41■■□□□ 1.18
RAB40C-207ENST00000563109 U3KPZ7 1027 aaPredicted RBP22.41■■□□□ 1.18
RAB40C-207ENST00000563109 ROBO3Q96MS0 1386 aa22.4■■□□□ 1.18
RAB40C-207ENST00000563109 PPARAQ07869 468 aa22.4■■□□□ 1.18
RAB40C-207ENST00000563109 SWAP70Q9UH65 585 aa22.4■■□□□ 1.18
RAB40C-207ENST00000563109 TMEM88BA6NKF7 163 aa22.39■■□□□ 1.17
RAB40C-207ENST00000563109 PTH1RQ03431 593 aa22.39■■□□□ 1.17
RAB40C-207ENST00000563109 IMMTQ16891 758 aaKnown RBP22.39■■□□□ 1.17
RAB40C-207ENST00000563109 CST9Q5W186 159 aa22.39■■□□□ 1.17
RAB40C-207ENST00000563109 METTL16Q86W50 562 aaKnown RBP22.39■■□□□ 1.17
RAB40C-207ENST00000563109 LSG1Q9H089 658 aaKnown RBP22.39■■□□□ 1.17
RAB40C-207ENST00000563109 FAM196BA6NMK8 535 aa22.38■■□□□ 1.17
RAB40C-207ENST00000563109 APLP1P51693 650 aa22.38■■□□□ 1.17
RAB40C-207ENST00000563109 MAP3K10Q02779 954 aa22.38■■□□□ 1.17
RAB40C-207ENST00000563109 WRNIP1Q96S55 665 aa22.38■■□□□ 1.17
RAB40C-207ENST00000563109 ZNF287Q9HBT7 754 aa22.38■■□□□ 1.17
RAB40C-207ENST00000563109 DOCK1Q14185 1865 aa22.38■■□□□ 1.17
RAB40C-207ENST00000563109 ATAD5Q96QE3 1844 aa22.38■■□□□ 1.17
RAB40C-207ENST00000563109 ZNF213O14771 459 aa22.37■■□□□ 1.17
RAB40C-207ENST00000563109 USP2O75604 605 aaPredicted RBP22.37■■□□□ 1.17
RAB40C-207ENST00000563109 GABPAQ06546 454 aa22.37■■□□□ 1.17
RAB40C-207ENST00000563109 MAP3K11Q16584 847 aa22.37■■□□□ 1.17
RAB40C-207ENST00000563109 C16orf86Q6ZW13 317 aa22.37■■□□□ 1.17
RAB40C-207ENST00000563109 MAP4K1Q92918 833 aa22.37■■□□□ 1.17
RAB40C-207ENST00000563109 ABT1Q9ULW3 272 aaKnown RBP22.37■■□□□ 1.17
RAB40C-207ENST00000563109 FZD1Q9UP38 647 aa22.37■■□□□ 1.17
RAB40C-207ENST00000563109 RBM8AQ9Y5S9 174 aaKnown RBP22.37■■□□□ 1.17
RAB40C-207ENST00000563109 C1QTNF8P60827 252 aa22.36■■□□□ 1.17
RAB40C-207ENST00000563109 HAND2P61296 217 aa22.36■■□□□ 1.17
RAB40C-207ENST00000563109 EVX2Q03828 476 aa22.36■■□□□ 1.17
RAB40C-207ENST00000563109 PDE4BQ07343 736 aa22.36■■□□□ 1.17
RAB40C-207ENST00000563109 MOB2Q70IA6 237 aa22.36■■□□□ 1.17
RAB40C-207ENST00000563109 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.36■■□□□ 1.17
RAB40C-207ENST00000563109 KLRG1Q96E93 195 aa22.36■■□□□ 1.17
RAB40C-207ENST00000563109 DYNLL2Q96FJ2 89 aa22.36■■□□□ 1.17
RAB40C-207ENST00000563109 DNAJC18Q9H819 358 aa22.36■■□□□ 1.17
RAB40C-207ENST00000563109 ANAPC4Q9UJX5 808 aa22.36■■□□□ 1.17
RAB40C-207ENST00000563109 CSADQ9Y600 493 aa22.36■■□□□ 1.17
RAB40C-207ENST00000563109 UBE2Q2LH0YL09 131 aa22.35■■□□□ 1.17
RAB40C-207ENST00000563109 ANKRD13AQ8IZ07 590 aa22.35■■□□□ 1.17
RAB40C-207ENST00000563109 STK11IPQ8N1F8 1099 aa22.35■■□□□ 1.17
RAB40C-207ENST00000563109 MKNK2Q9HBH9 465 aa22.35■■□□□ 1.17
RAB40C-207ENST00000563109 CREBZFQ9NS37 354 aa22.35■■□□□ 1.17
RAB40C-207ENST00000563109 ZNF112Q9UJU3 913 aa22.35■■□□□ 1.17
RAB40C-207ENST00000563109 UNCXA6NJT0 531 aa22.34■■□□□ 1.17
RAB40C-207ENST00000563109 SLURP2P0DP57 97 aa22.34■■□□□ 1.17
RAB40C-207ENST00000563109 CDK8P49336 464 aa22.34■■□□□ 1.17
RAB40C-207ENST00000563109 HUNKP57058 714 aa22.34■■□□□ 1.17
RAB40C-207ENST00000563109 MAP3K9P80192 1104 aa22.34■■□□□ 1.17
RAB40C-207ENST00000563109 CTDSPL2Q05D32 466 aa22.34■■□□□ 1.17
RAB40C-207ENST00000563109 SLC44A5Q8NCS7 719 aa22.34■■□□□ 1.17
RAB40C-207ENST00000563109 RNF41Q9H4P4 317 aaPredicted RBP22.34■■□□□ 1.17
RAB40C-207ENST00000563109 TLL2Q9Y6L7 1015 aa22.34■■□□□ 1.17
RAB40C-207ENST00000563109 SMIM22K7EJ46 135 aa22.33■■□□□ 1.17
RAB40C-207ENST00000563109 CTNND1O60716 968 aaKnown RBP22.33■■□□□ 1.17
RAB40C-207ENST00000563109 SHMT1P34896 483 aa22.33■■□□□ 1.17
RAB40C-207ENST00000563109 CERKLQ49MI3 558 aaPredicted RBP22.33■■□□□ 1.17
RAB40C-207ENST00000563109 TATDN1Q6P1N9 297 aa22.33■■□□□ 1.17
RAB40C-207ENST00000563109 PHF20L1A8MW92 1017 aa22.32■■□□□ 1.16
RAB40C-207ENST00000563109 EPB41L2O43491 1005 aaKnown RBP22.32■■□□□ 1.16
RAB40C-207ENST00000563109 PCP11498 1178 aaKnown RBP22.32■■□□□ 1.16
RAB40C-207ENST00000563109 INPP5BP32019 993 aa22.32■■□□□ 1.16
RAB40C-207ENST00000563109 VGLL4Q14135 290 aa22.32■■□□□ 1.16
RAB40C-207ENST00000563109 C8orf34Q49A92 452 aa22.32■■□□□ 1.16
RAB40C-207ENST00000563109 RNF20Q5VTR2 975 aa22.32■■□□□ 1.16
RAB40C-207ENST00000563109 SAPCD2Q86UD0 394 aa22.32■■□□□ 1.16
RAB40C-207ENST00000563109 PICK1Q9NRD5 415 aa22.32■■□□□ 1.16
RAB40C-207ENST00000563109 TOMM22Q9NS69 142 aa22.32■■□□□ 1.16
RAB40C-207ENST00000563109 CAP2P40123 477 aa22.31■■□□□ 1.16
RAB40C-207ENST00000563109 NOL9Q5SY16 702 aaKnown RBP22.31■■□□□ 1.16
RAB40C-207ENST00000563109 AKNAD1Q5T1N1 836 aa22.31■■□□□ 1.16
RAB40C-207ENST00000563109 LDLRAD1Q5T700 205 aa22.31■■□□□ 1.16
RAB40C-207ENST00000563109 MFSD6Q6ZSS7 791 aa22.31■■□□□ 1.16
RAB40C-207ENST00000563109 SCYL3Q8IZE3 742 aa22.31■■□□□ 1.16
RAB40C-207ENST00000563109 STAG1Q8WVM7 1258 aa22.31■■□□□ 1.16
RAB40C-207ENST00000563109 ZKSCAN4Q969J2 545 aaPredicted RBP22.31■■□□□ 1.16
RAB40C-207ENST00000563109 CCDC17Q96LX7 622 aa22.31■■□□□ 1.16
RAB40C-207ENST00000563109 CABP5Q9NP86 173 aa22.31■■□□□ 1.16
RAB40C-207ENST00000563109 GINM1Q9NU53 330 aa22.31■■□□□ 1.16
RAB40C-207ENST00000563109 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.31■■□□□ 1.16
RAB40C-207ENST00000563109 MPHOSPH10O00566 681 aaKnown RBP22.3■■□□□ 1.16
RAB40C-207ENST00000563109 GDF11O95390 407 aa22.3■■□□□ 1.16
RAB40C-207ENST00000563109 MCCP23508 829 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms