RNA–Protein interactions for RNA: ENST00000563003.1

AC040174.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC040174.1, Length 2,571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC040174.1-201ENST00000563003 HMGB1P09429 215 aaKnown RBP15.64■□□□□ 0.09
AC040174.1-201ENST00000563003 ATP6V1AP38606 617 aa15.64■□□□□ 0.09
AC040174.1-201ENST00000563003 MSL3Q8N5Y2 521 aaKnown RBP15.64■□□□□ 0.09
AC040174.1-201ENST00000563003 DESI2Q9BSY9 194 aa15.64■□□□□ 0.09
AC040174.1-201ENST00000563003 ABCB6Q9NP58 842 aa15.64■□□□□ 0.09
AC040174.1-201ENST00000563003 POLR3EQ9NVU0 708 aa15.64■□□□□ 0.09
AC040174.1-201ENST00000563003 PUF60Q9UHX1 559 aaKnown RBP15.64■□□□□ 0.09
AC040174.1-201ENST00000563003 DBNLQ9UJU6 430 aaKnown RBP15.64■□□□□ 0.09
AC040174.1-201ENST00000563003 RAB21Q9UL25 225 aa15.64■□□□□ 0.09
AC040174.1-201ENST00000563003 LOC102724428A0A0B4J2F2 783 aa15.64■□□□□ 0.09
AC040174.1-201ENST00000563003 EYA2O00167 538 aa15.64■□□□□ 0.09
AC040174.1-201ENST00000563003 ATP5JP18859 108 aa15.64■□□□□ 0.09
AC040174.1-201ENST00000563003 PDIA3P30101 505 aaKnown RBP15.64■□□□□ 0.09
AC040174.1-201ENST00000563003 SIK1P57059 783 aa15.64■□□□□ 0.09
AC040174.1-201ENST00000563003 TBX2Q13207 712 aaPredicted RBP15.64■□□□□ 0.09
AC040174.1-201ENST00000563003 FAM98CQ17RN3 349 aaKnown RBP15.64■□□□□ 0.09
AC040174.1-201ENST00000563003 AXDND1Q5T1B0 1012 aaPredicted RBP15.64■□□□□ 0.09
AC040174.1-201ENST00000563003 NLRP10Q86W26 655 aa15.64■□□□□ 0.09
AC040174.1-201ENST00000563003 DZIP3Q86Y13 1208 aaKnown RBP15.64■□□□□ 0.09
AC040174.1-201ENST00000563003 FNBP4Q8N3X1 1017 aaPredicted RBP15.64■□□□□ 0.09
AC040174.1-201ENST00000563003 SMARCC1Q92922 1105 aaPredicted RBP15.64■□□□□ 0.09
AC040174.1-201ENST00000563003 FAM89AQ96GI7 184 aa15.64■□□□□ 0.09
AC040174.1-201ENST00000563003 TUBE1Q9UJT0 475 aa15.64■□□□□ 0.09
AC040174.1-201ENST00000563003 CDHR2Q9BYE9 1310 aa15.63■□□□□ 0.09
AC040174.1-201ENST00000563003 EP400Q96L91 3159 aa15.63■□□□□ 0.09
AC040174.1-201ENST00000563003 ADKP55263 362 aaKnown RBP15.63■□□□□ 0.09
AC040174.1-201ENST00000563003 EXOSC10Q01780 885 aaKnown RBP15.63■□□□□ 0.09
AC040174.1-201ENST00000563003 CCDC57Q2TAC2 916 aa15.63■□□□□ 0.09
AC040174.1-201ENST00000563003 TC2NQ8N9U0 490 aa15.63■□□□□ 0.09
AC040174.1-201ENST00000563003 AGXT2Q9BYV1 514 aa15.63■□□□□ 0.09
AC040174.1-201ENST00000563003 CCDC87Q9NVE4 849 aa15.63■□□□□ 0.09
AC040174.1-201ENST00000563003 ZNF609O15014 1411 aa15.63■□□□□ 0.09
AC040174.1-201ENST00000563003 CMA1P23946 247 aa15.63■□□□□ 0.09
AC040174.1-201ENST00000563003 USP21Q9UK80 565 aa15.63■□□□□ 0.09
AC040174.1-201ENST00000563003 FBXO3Q9UK99 471 aa15.63■□□□□ 0.09
AC040174.1-201ENST00000563003 CICQ96RK0 1608 aaPredicted RBP15.63■□□□□ 0.09
AC040174.1-201ENST00000563003 PHACTR2O75167 634 aa15.62■□□□□ 0.09
AC040174.1-201ENST00000563003 CSF1RP07333 972 aa15.62■□□□□ 0.09
AC040174.1-201ENST00000563003 EIF5P55010 431 aaKnown RBP15.62■□□□□ 0.09
AC040174.1-201ENST00000563003 SART3Q15020 963 aaKnown RBP15.62■□□□□ 0.09
AC040174.1-201ENST00000563003 MCMDC2Q4G0Z9 681 aa15.62■□□□□ 0.09
AC040174.1-201ENST00000563003 INTS5Q6P9B9 1019 aaKnown RBP15.62■□□□□ 0.09
AC040174.1-201ENST00000563003 MSANTD4Q8NCY6 345 aa15.62■□□□□ 0.09
AC040174.1-201ENST00000563003 DEF6Q9H4E7 631 aa15.62■□□□□ 0.09
AC040174.1-201ENST00000563003 MRPL44Q9H9J2 332 aaKnown RBP15.62■□□□□ 0.09
AC040174.1-201ENST00000563003 ERLIN1O75477 346 aa15.62■□□□□ 0.09
AC040174.1-201ENST00000563003 WDHD1O75717 1129 aaPredicted RBP15.62■□□□□ 0.09
AC040174.1-201ENST00000563003 GPTP24298 496 aa15.62■□□□□ 0.09
AC040174.1-201ENST00000563003 HSP90AA4PQ58FG1 418 aa15.62■□□□□ 0.09
AC040174.1-201ENST00000563003 MYSM1Q5VVJ2 828 aa15.62■□□□□ 0.09
AC040174.1-201ENST00000563003 CNNM3Q8NE01 707 aa15.62■□□□□ 0.09
AC040174.1-201ENST00000563003 SECISBP2LQ93073 1101 aaKnown RBP15.62■□□□□ 0.09
AC040174.1-201ENST00000563003 TBC1D2BQ9UPU7 963 aa15.62■□□□□ 0.09
AC040174.1-201ENST00000563003 MROH7-TTC4A0A0A0MT08 1334 aa15.61■□□□□ 0.09
AC040174.1-201ENST00000563003 POTEB2H3BUK9 544 aa15.61■□□□□ 0.09
AC040174.1-201ENST00000563003 CCDC102AQ96A19 550 aa15.61■□□□□ 0.09
AC040174.1-201ENST00000563003 PLEKHA4Q9H4M7 779 aa15.61■□□□□ 0.09
AC040174.1-201ENST00000563003 PALLDQ8WX93 1383 aa15.61■□□□□ 0.09
AC040174.1-201ENST00000563003 CRKLP46109 303 aaKnown RBP15.61■□□□□ 0.09
AC040174.1-201ENST00000563003 MMP14P50281 582 aa15.61■□□□□ 0.09
AC040174.1-201ENST00000563003 CASP8Q14790 479 aa15.61■□□□□ 0.09
AC040174.1-201ENST00000563003 CHST3Q7LGC8 479 aa15.61■□□□□ 0.09
AC040174.1-201ENST00000563003 ZNF274Q96GC6 653 aaPredicted RBP15.61■□□□□ 0.09
AC040174.1-201ENST00000563003 ZNF594Q96JF6 807 aaPredicted RBP15.61■□□□□ 0.09
AC040174.1-201ENST00000563003 DBNDD2Q9BQY9 259 aa15.61■□□□□ 0.09
AC040174.1-201ENST00000563003 RREB1Q92766 1687 aa15.6■□□□□ 0.09
AC040174.1-201ENST00000563003 MARCKSP29966 332 aaPredicted RBP15.6■□□□□ 0.09
AC040174.1-201ENST00000563003 SYKP43405 635 aa15.6■□□□□ 0.09
AC040174.1-201ENST00000563003 PNOCQ13519 176 aa15.6■□□□□ 0.09
AC040174.1-201ENST00000563003 MTF1Q14872 753 aa15.6■□□□□ 0.09
AC040174.1-201ENST00000563003 LRRC24Q50LG9 513 aa15.6■□□□□ 0.09
AC040174.1-201ENST00000563003 HSP90B2PQ58FF3 399 aa15.6■□□□□ 0.09
AC040174.1-201ENST00000563003 CEP112Q8N8E3 955 aa15.6■□□□□ 0.09
AC040174.1-201ENST00000563003 FAM71BQ8TC56 605 aa15.6■□□□□ 0.09
AC040174.1-201ENST00000563003 CDC23Q9UJX2 597 aa15.6■□□□□ 0.09
AC040174.1-201ENST00000563003 MYH3P11055 1940 aa15.6■□□□□ 0.09
AC040174.1-201ENST00000563003 E2F4Q16254 413 aa15.6■□□□□ 0.09
AC040174.1-201ENST00000563003 ANO1Q5XXA6 986 aa15.6■□□□□ 0.09
AC040174.1-201ENST00000563003 SYNE3Q6ZMZ3 975 aa15.6■□□□□ 0.09
AC040174.1-201ENST00000563003 ZNF34Q8IZ26 560 aa15.6■□□□□ 0.09
AC040174.1-201ENST00000563003 C8orf76Q96K31 380 aa15.6■□□□□ 0.09
AC040174.1-201ENST00000563003 LZTFL1Q9NQ48 299 aa15.6■□□□□ 0.09
AC040174.1-201ENST00000563003 A0A0G2JLW4 131 aa15.59■□□□□ 0.09
AC040174.1-201ENST00000563003 KCNQ2O43526 872 aa15.59■□□□□ 0.09
AC040174.1-201ENST00000563003 MYO1BO43795 1136 aa15.59■□□□□ 0.09
AC040174.1-201ENST00000563003 VSNL1P62760 191 aa15.59■□□□□ 0.09
AC040174.1-201ENST00000563003 IFIT5Q13325 482 aaKnown RBP15.59■□□□□ 0.09
AC040174.1-201ENST00000563003 ITPK1Q13572 414 aa15.59■□□□□ 0.09
AC040174.1-201ENST00000563003 ZNF772Q68DY9 489 aaPredicted RBP15.59■□□□□ 0.09
AC040174.1-201ENST00000563003 SPECC1LQ69YQ0 1117 aa15.59■□□□□ 0.09
AC040174.1-201ENST00000563003 OLFM4Q6UX06 510 aa15.59■□□□□ 0.09
AC040174.1-201ENST00000563003 SUGP1Q8IWZ8 645 aaKnown RBP15.59■□□□□ 0.09
AC040174.1-201ENST00000563003 GPATCH11Q8N954 259 aa15.59■□□□□ 0.09
AC040174.1-201ENST00000563003 GJB4Q9NTQ9 266 aa15.59■□□□□ 0.09
AC040174.1-201ENST00000563003 TRMT112Q9UI30 125 aaKnown RBP15.59■□□□□ 0.09
AC040174.1-201ENST00000563003 MYH14Q7Z406 1995 aaKnown RBP15.59■□□□□ 0.09
AC040174.1-201ENST00000563003 CPP00450 1065 aa15.59■□□□□ 0.09
AC040174.1-201ENST00000563003 RHOXF2BP0C7M4 288 aa15.59■□□□□ 0.09
AC040174.1-201ENST00000563003 EFCAB13Q8IY85 973 aa15.59■□□□□ 0.09
AC040174.1-201ENST00000563003 NEUROD6Q96NK8 337 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms