RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 HIP1O00291 1037 aa16.13■□□□□ 0.17
CDH1-204ENST00000562118 USP5P45974 858 aa16.13■□□□□ 0.17
CDH1-204ENST00000562118 VEGFBP49765 207 aa16.13■□□□□ 0.17
CDH1-204ENST00000562118 VGLL4Q14135 290 aa16.13■□□□□ 0.17
CDH1-204ENST00000562118 MCMDC2Q4G0Z9 681 aa16.13■□□□□ 0.17
CDH1-204ENST00000562118 SKAP1Q86WV1 359 aa16.13■□□□□ 0.17
CDH1-204ENST00000562118 FOXP4Q8IVH2 680 aaPredicted RBP16.13■□□□□ 0.17
CDH1-204ENST00000562118 PALD1Q9ULE6 856 aa16.13■□□□□ 0.17
CDH1-204ENST00000562118 SLURP2P0DP57 97 aa16.12■□□□□ 0.17
CDH1-204ENST00000562118 PLCD1P51178 756 aa16.12■□□□□ 0.17
CDH1-204ENST00000562118 MAP3K9P80192 1104 aa16.12■□□□□ 0.17
CDH1-204ENST00000562118 NMIQ13287 307 aaPredicted RBP16.12■□□□□ 0.17
CDH1-204ENST00000562118 TATDN1Q6P1N9 297 aa16.12■□□□□ 0.17
CDH1-204ENST00000562118 MIGA2Q7L4E1 593 aa16.12■□□□□ 0.17
CDH1-204ENST00000562118 RILPL2Q969X0 211 aa16.12■□□□□ 0.17
CDH1-204ENST00000562118 CCDC102AQ96A19 550 aa16.12■□□□□ 0.17
CDH1-204ENST00000562118 CLMNQ96JQ2 1002 aa16.12■□□□□ 0.17
CDH1-204ENST00000562118 CAPNS2Q96L46 248 aa16.12■□□□□ 0.17
CDH1-204ENST00000562118 WRNIP1Q96S55 665 aa16.12■□□□□ 0.17
CDH1-204ENST00000562118 SLC4A4Q9Y6R1 1079 aa16.12■□□□□ 0.17
CDH1-204ENST00000562118 LOC285556D6RIA3 1793 aa16.12■□□□□ 0.17
CDH1-204ENST00000562118 RAD50Q92878 1312 aa16.12■□□□□ 0.17
CDH1-204ENST00000562118 WDR33Q9C0J8 1336 aaKnown RBP16.12■□□□□ 0.17
CDH1-204ENST00000562118 SPDYE5A6NIY4 337 aa16.11■□□□□ 0.17
CDH1-204ENST00000562118 PATL2C9JE40 543 aaKnown RBP16.11■□□□□ 0.17
CDH1-204ENST00000562118 ZBTB48P10074 688 aaPredicted RBP16.11■□□□□ 0.17
CDH1-204ENST00000562118 ECE1P42892 770 aa16.11■□□□□ 0.17
CDH1-204ENST00000562118 RRP1BQ14684 758 aaKnown RBP16.11■□□□□ 0.17
CDH1-204ENST00000562118 ALX1Q15699 326 aa16.11■□□□□ 0.17
CDH1-204ENST00000562118 C12orf60Q5U649 245 aa16.11■□□□□ 0.17
CDH1-204ENST00000562118 CYP4F22Q6NT55 531 aa16.11■□□□□ 0.17
CDH1-204ENST00000562118 TTC6Q86TZ1 520 aa16.11■□□□□ 0.17
CDH1-204ENST00000562118 ZNF589Q86UQ0 364 aaPredicted RBP16.11■□□□□ 0.17
CDH1-204ENST00000562118 ARPP21Q9UBL0 812 aaPredicted RBP16.11■□□□□ 0.17
CDH1-204ENST00000562118 SERPINB13Q9UIV8 391 aa16.11■□□□□ 0.17
CDH1-204ENST00000562118 CCDC171Q6TFL3 1326 aa16.11■□□□□ 0.17
CDH1-204ENST00000562118 CTNND1O60716 968 aaKnown RBP16.1■□□□□ 0.17
CDH1-204ENST00000562118 HLA-DOAP06340 250 aa16.1■□□□□ 0.17
CDH1-204ENST00000562118 CHMLP26374 656 aa16.1■□□□□ 0.17
CDH1-204ENST00000562118 INPP5BP32019 993 aa16.1■□□□□ 0.17
CDH1-204ENST00000562118 GJA5P36382 358 aa16.1■□□□□ 0.17
CDH1-204ENST00000562118 MAP2K2P36507 400 aa16.1■□□□□ 0.17
CDH1-204ENST00000562118 EVX2Q03828 476 aa16.1■□□□□ 0.17
CDH1-204ENST00000562118 NOGQ13253 232 aa16.1■□□□□ 0.17
CDH1-204ENST00000562118 PRKG1Q13976 671 aa16.1■□□□□ 0.17
CDH1-204ENST00000562118 SPRYD7Q5W111 196 aa16.1■□□□□ 0.17
CDH1-204ENST00000562118 CTR9Q6PD62 1173 aa16.1■□□□□ 0.17
CDH1-204ENST00000562118 ZSCAN29Q8IWY8 852 aaPredicted RBP16.1■□□□□ 0.17
CDH1-204ENST00000562118 IL25Q9H293 177 aa16.1■□□□□ 0.17
CDH1-204ENST00000562118 GINM1Q9NU53 330 aa16.1■□□□□ 0.17
CDH1-204ENST00000562118 SAP30BPQ9UHR5 308 aaKnown RBP16.1■□□□□ 0.17
CDH1-204ENST00000562118 SHMT1P34896 483 aa16.09■□□□□ 0.17
CDH1-204ENST00000562118 ZNF157P51786 506 aaPredicted RBP16.09■□□□□ 0.17
CDH1-204ENST00000562118 TTLL12Q14166 644 aaPredicted RBP16.09■□□□□ 0.17
CDH1-204ENST00000562118 CCDC129Q6ZRS4 1044 aa16.09■□□□□ 0.17
CDH1-204ENST00000562118 SCYL3Q8IZE3 742 aa16.09■□□□□ 0.17
CDH1-204ENST00000562118 IFNL3Q8IZI9 196 aa16.09■□□□□ 0.17
CDH1-204ENST00000562118 ZKSCAN4Q969J2 545 aaPredicted RBP16.09■□□□□ 0.17
CDH1-204ENST00000562118 WNK4Q96J92 1243 aa16.09■□□□□ 0.17
CDH1-204ENST00000562118 MCM9Q9NXL9 1143 aa16.09■□□□□ 0.17
CDH1-204ENST00000562118 TESPA1A2RU30 521 aaPredicted RBP16.08■□□□□ 0.16
CDH1-204ENST00000562118 USP17L12C9JPN9 530 aa16.08■□□□□ 0.16
CDH1-204ENST00000562118 USP17L21D6R901 530 aa16.08■□□□□ 0.16
CDH1-204ENST00000562118 CAP2P40123 477 aa16.08■□□□□ 0.16
CDH1-204ENST00000562118 VPS53Q5VIR6 699 aa16.08■□□□□ 0.16
CDH1-204ENST00000562118 C16orf86Q6ZW13 317 aa16.08■□□□□ 0.16
CDH1-204ENST00000562118 ERO1BQ86YB8 467 aa16.08■□□□□ 0.16
CDH1-204ENST00000562118 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.08■□□□□ 0.16
CDH1-204ENST00000562118 FAM196BA6NMK8 535 aa16.07■□□□□ 0.16
CDH1-204ENST00000562118 CYP2D6P10635 497 aa16.07■□□□□ 0.16
CDH1-204ENST00000562118 HSPD1P10809 573 aaKnown RBP16.07■□□□□ 0.16
CDH1-204ENST00000562118 PPATQ06203 517 aa16.07■□□□□ 0.16
CDH1-204ENST00000562118 PPIL2Q13356 520 aa16.07■□□□□ 0.16
CDH1-204ENST00000562118 REM2Q8IYK8 340 aaPredicted RBP16.07■□□□□ 0.16
CDH1-204ENST00000562118 DIAPH3Q9NSV4 1193 aa16.07■□□□□ 0.16
CDH1-204ENST00000562118 SWAP70Q9UH65 585 aa16.07■□□□□ 0.16
CDH1-204ENST00000562118 ANAPC4Q9UJX5 808 aa16.07■□□□□ 0.16
CDH1-204ENST00000562118 KCNH4Q9UQ05 1017 aa16.07■□□□□ 0.16
CDH1-204ENST00000562118 CSADQ9Y600 493 aa16.07■□□□□ 0.16
CDH1-204ENST00000562118 SMIM22K7EJ46 135 aa16.06■□□□□ 0.16
CDH1-204ENST00000562118 SGSM2O43147 1006 aa16.06■□□□□ 0.16
CDH1-204ENST00000562118 POLR3DP05423 398 aaPredicted RBP16.06■□□□□ 0.16
CDH1-204ENST00000562118 FGRP09769 529 aa16.06■□□□□ 0.16
CDH1-204ENST00000562118 PTPRAP18433 802 aa16.06■□□□□ 0.16
CDH1-204ENST00000562118 MFAP1P55081 439 aaKnown RBP16.06■□□□□ 0.16
CDH1-204ENST00000562118 JAG1P78504 1218 aa16.06■□□□□ 0.16
CDH1-204ENST00000562118 CWC27Q6UX04 472 aaKnown RBP16.06■□□□□ 0.16
CDH1-204ENST00000562118 OPTNQ96CV9 577 aa16.06■□□□□ 0.16
CDH1-204ENST00000562118 SLC10A4Q96EP9 437 aa16.06■□□□□ 0.16
CDH1-204ENST00000562118 DDRGK1Q96HY6 314 aa16.06■□□□□ 0.16
CDH1-204ENST00000562118 MS4A4AQ96JQ5 239 aa16.06■□□□□ 0.16
CDH1-204ENST00000562118 ZIC5Q96T25 663 aa16.06■□□□□ 0.16
CDH1-204ENST00000562118 DSCC1Q9BVC3 393 aa16.06■□□□□ 0.16
CDH1-204ENST00000562118 TBC1D2Q9BYX2 928 aa16.06■□□□□ 0.16
CDH1-204ENST00000562118 ELP3Q9H9T3 547 aa16.06■□□□□ 0.16
CDH1-204ENST00000562118 PLIN4Q96Q06 1357 aa16.05■□□□□ 0.16
CDH1-204ENST00000562118 CYP2D7A0A087X1C5 515 aa16.05■□□□□ 0.16
CDH1-204ENST00000562118 AOC2O75106 756 aa16.05■□□□□ 0.16
CDH1-204ENST00000562118 TM4SF4P48230 202 aa16.05■□□□□ 0.16
CDH1-204ENST00000562118 CNKSR2Q8WXI2 1034 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms