RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 TEX11Q8IYF3 940 aa10.12□□□□□ -0.79
GINS3-204ENST00000561952 SH3RF3Q8TEJ3 882 aaPredicted RBP10.12□□□□□ -0.79
GINS3-204ENST00000561952 NOL10Q9BSC4 688 aaKnown RBP10.12□□□□□ -0.79
GINS3-204ENST00000561952 PICK1Q9NRD5 415 aa10.12□□□□□ -0.79
GINS3-204ENST00000561952 AATFQ9NY61 560 aaKnown RBP eCLIP10.12□□□□□ -0.79
GINS3-204ENST00000561952 CPA4Q9UI42 421 aa10.12□□□□□ -0.79
GINS3-204ENST00000561952 ZNF112Q9UJU3 913 aa10.12□□□□□ -0.79
GINS3-204ENST00000561952 PTPN22Q9Y2R2 807 aa10.12□□□□□ -0.79
GINS3-204ENST00000561952 NDUFB9Q9Y6M9 179 aa10.12□□□□□ -0.79
GINS3-204ENST00000561952 FOCADQ5VW36 1801 aa10.12□□□□□ -0.79
GINS3-204ENST00000561952 PDE4DIPQ5VU43 2346 aa10.11□□□□□ -0.79
GINS3-204ENST00000561952 GPR75-ASB3A0A0A6YYF3 556 aa10.11□□□□□ -0.79
GINS3-204ENST00000561952 PDHXO00330 501 aa10.11□□□□□ -0.79
GINS3-204ENST00000561952 LDHCP07864 332 aa10.11□□□□□ -0.79
GINS3-204ENST00000561952 ZAP70P43403 619 aa10.11□□□□□ -0.79
GINS3-204ENST00000561952 NOL9Q5SY16 702 aaKnown RBP10.11□□□□□ -0.79
GINS3-204ENST00000561952 LCE2DQ5TA82 110 aaPredicted RBP10.11□□□□□ -0.79
GINS3-204ENST00000561952 SCYL3Q8IZE3 742 aa10.11□□□□□ -0.79
GINS3-204ENST00000561952 DBNLQ9UJU6 430 aaKnown RBP10.11□□□□□ -0.79
GINS3-204ENST00000561952 COG6Q9Y2V7 657 aa10.11□□□□□ -0.79
GINS3-204ENST00000561952 PTCH2Q9Y6C5 1203 aa10.11□□□□□ -0.79
GINS3-204ENST00000561952 ZHX2Q9Y6X8 837 aa10.11□□□□□ -0.79
GINS3-204ENST00000561952 SIPA1L1O43166 1804 aa10.11□□□□□ -0.79
GINS3-204ENST00000561952 MGAMO43451 1857 aa10.1□□□□□ -0.79
GINS3-204ENST00000561952 MYH1P12882 1939 aa10.1□□□□□ -0.79
GINS3-204ENST00000561952 POTEFA5A3E0 1075 aa10.1□□□□□ -0.79
GINS3-204ENST00000561952 TRIM75PA6NK02 468 aa10.1□□□□□ -0.79
GINS3-204ENST00000561952 PHF20L1A8MW92 1017 aa10.1□□□□□ -0.79
GINS3-204ENST00000561952 TLR2O60603 784 aa10.1□□□□□ -0.79
GINS3-204ENST00000561952 CYP2E1P05181 493 aaPredicted RBP10.1□□□□□ -0.79
GINS3-204ENST00000561952 CYP2C8P10632 490 aa10.1□□□□□ -0.79
GINS3-204ENST00000561952 KIF22Q14807 665 aa10.1□□□□□ -0.79
GINS3-204ENST00000561952 ADGRA1Q86SQ6 560 aa10.1□□□□□ -0.79
GINS3-204ENST00000561952 AACSQ86V21 672 aa10.1□□□□□ -0.79
GINS3-204ENST00000561952 MAPKAPK5Q8IW41 473 aa10.1□□□□□ -0.79
GINS3-204ENST00000561952 EAF2Q96CJ1 260 aaPredicted RBP10.1□□□□□ -0.79
GINS3-204ENST00000561952 KIF12Q96FN5 646 aa10.1□□□□□ -0.79
GINS3-204ENST00000561952 OSBPL5Q9H0X9 879 aaPredicted RBP10.1□□□□□ -0.79
GINS3-204ENST00000561952 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.1□□□□□ -0.79
GINS3-204ENST00000561952 IL1RAPL2Q9NP60 686 aa10.1□□□□□ -0.79
GINS3-204ENST00000561952 GPR108Q9NPR9 543 aa10.1□□□□□ -0.79
GINS3-204ENST00000561952 PIH1D3Q9NQM4 214 aaKnown RBP10.1□□□□□ -0.79
GINS3-204ENST00000561952 KIAA0100Q14667 2235 aaKnown RBP10.09□□□□□ -0.79
GINS3-204ENST00000561952 IDH1O75874 414 aaKnown RBP10.09□□□□□ -0.79
GINS3-204ENST00000561952 PTPRAP18433 802 aa10.09□□□□□ -0.79
GINS3-204ENST00000561952 DYNLL1P63167 89 aaKnown RBP10.09□□□□□ -0.79
GINS3-204ENST00000561952 LACTBP83111 547 aaPredicted RBP10.09□□□□□ -0.79
GINS3-204ENST00000561952 SLC9C1Q4G0N8 1177 aa10.09□□□□□ -0.79
GINS3-204ENST00000561952 ANKRD23Q86SG2 305 aa10.09□□□□□ -0.79
GINS3-204ENST00000561952 MIGA1Q8NAN2 632 aa10.09□□□□□ -0.79
GINS3-204ENST00000561952 TGFBRAP1Q8WUH2 860 aa10.09□□□□□ -0.79
GINS3-204ENST00000561952 SAP30BPQ9UHR5 308 aaKnown RBP10.09□□□□□ -0.79
GINS3-204ENST00000561952 KCNH4Q9UQ05 1017 aa10.09□□□□□ -0.79
GINS3-204ENST00000561952 NOP58Q9Y2X3 529 aaKnown RBP10.09□□□□□ -0.79
GINS3-204ENST00000561952 RBBP6Q7Z6E9 1792 aaKnown RBP10.09□□□□□ -0.79
GINS3-204ENST00000561952 NAV1Q8NEY1 1877 aa10.08□□□□□ -0.8
GINS3-204ENST00000561952 BAG3O95817 575 aa10.08□□□□□ -0.8
GINS3-204ENST00000561952 CYP7A1P22680 504 aa10.08□□□□□ -0.8
GINS3-204ENST00000561952 MOGSQ13724 837 aa10.08□□□□□ -0.8
GINS3-204ENST00000561952 GPAT2Q6NUI2 795 aa10.08□□□□□ -0.8
GINS3-204ENST00000561952 SH3TC2Q8TF17 1288 aa10.08□□□□□ -0.8
GINS3-204ENST00000561952 PARK7Q99497 189 aaKnown RBP10.08□□□□□ -0.8
GINS3-204ENST00000561952 FLT1P17948 1338 aa10.07□□□□□ -0.8
GINS3-204ENST00000561952 LOC285556D6RIA3 1793 aa10.07□□□□□ -0.8
GINS3-204ENST00000561952 A0A0G2JLL6 359 aaPredicted RBP10.07□□□□□ -0.8
GINS3-204ENST00000561952 CTNND1O60716 968 aaKnown RBP10.07□□□□□ -0.8
GINS3-204ENST00000561952 FMNL1O95466 1100 aaPredicted RBP10.07□□□□□ -0.8
GINS3-204ENST00000561952 CTGFP29279 349 aa10.07□□□□□ -0.8
GINS3-204ENST00000561952 PSMC4P43686 418 aa10.07□□□□□ -0.8
GINS3-204ENST00000561952 RRP1BQ14684 758 aaKnown RBP10.07□□□□□ -0.8
GINS3-204ENST00000561952 ARHGEF6Q15052 776 aa10.07□□□□□ -0.8
GINS3-204ENST00000561952 C17orf99Q6UX52 265 aa10.07□□□□□ -0.8
GINS3-204ENST00000561952 PRRT2Q7Z6L0 340 aaPredicted RBP10.07□□□□□ -0.8
GINS3-204ENST00000561952 CRACR2BQ8N4Y2 399 aaPredicted RBP10.07□□□□□ -0.8
GINS3-204ENST00000561952 MAGEB6Q8N7X4 407 aa10.07□□□□□ -0.8
GINS3-204ENST00000561952 TRIM34Q9BYJ4 488 aa10.07□□□□□ -0.8
GINS3-204ENST00000561952 ANTXR1Q9H6X2 564 aa10.07□□□□□ -0.8
GINS3-204ENST00000561952 ZCCHC17Q9NP64 241 aaKnown RBP10.07□□□□□ -0.8
GINS3-204ENST00000561952 RCAN3Q9UKA8 241 aa10.07□□□□□ -0.8
GINS3-204ENST00000561952 AFG3L2Q9Y4W6 797 aa10.07□□□□□ -0.8
GINS3-204ENST00000561952 ADGRA2Q96PE1 1338 aa10.07□□□□□ -0.8
GINS3-204ENST00000561952 COL2A1P02458 1487 aaPredicted RBP10.06□□□□□ -0.8
GINS3-204ENST00000561952 CXCL11O14625 94 aa10.06□□□□□ -0.8
GINS3-204ENST00000561952 GDF11O95390 407 aa10.06□□□□□ -0.8
GINS3-204ENST00000561952 MS4A1P11836 297 aa10.06□□□□□ -0.8
GINS3-204ENST00000561952 PLCG2P16885 1265 aa10.06□□□□□ -0.8
GINS3-204ENST00000561952 EN2P19622 333 aaPredicted RBP10.06□□□□□ -0.8
GINS3-204ENST00000561952 USP5P45974 858 aa10.06□□□□□ -0.8
GINS3-204ENST00000561952 SHROOM1Q2M3G4 852 aaPredicted RBP10.06□□□□□ -0.8
GINS3-204ENST00000561952 TREML2Q5T2D2 321 aa10.06□□□□□ -0.8
GINS3-204ENST00000561952 C20orf194Q5TEA3 1177 aa10.06□□□□□ -0.8
GINS3-204ENST00000561952 FASTKD5Q7L8L6 764 aaKnown RBP10.06□□□□□ -0.8
GINS3-204ENST00000561952 ERC1Q8IUD2 1116 aa10.06□□□□□ -0.8
GINS3-204ENST00000561952 RHPN1Q8TCX5 695 aa10.06□□□□□ -0.8
GINS3-204ENST00000561952 SMCR8Q8TEV9 937 aaPredicted RBP10.06□□□□□ -0.8
GINS3-204ENST00000561952 TRIM47Q96LD4 638 aa10.06□□□□□ -0.8
GINS3-204ENST00000561952 DNAJC2Q99543 621 aaKnown RBP10.06□□□□□ -0.8
GINS3-204ENST00000561952 TMEM106CQ9BVX2 250 aa10.06□□□□□ -0.8
GINS3-204ENST00000561952 BMP2KQ9NSY1 1161 aaPredicted RBP10.06□□□□□ -0.8
GINS3-204ENST00000561952 PALD1Q9ULE6 856 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms