RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 SEC62Q99442 399 aaKnown RBP16.81■□□□□ 0.28
TPM1-230ENST00000561266 PTPN18Q99952 460 aa16.81■□□□□ 0.28
TPM1-230ENST00000561266 R3HDMLQ9H3Y0 253 aa16.81■□□□□ 0.28
TPM1-230ENST00000561266 CSADQ9Y600 493 aa16.81■□□□□ 0.28
TPM1-230ENST00000561266 PTPRFP10586 1907 aa16.8■□□□□ 0.28
TPM1-230ENST00000561266 IGF2BP3O00425 579 aaKnown RBP eCLIP16.8■□□□□ 0.28
TPM1-230ENST00000561266 ERC2O15083 957 aa16.8■□□□□ 0.28
TPM1-230ENST00000561266 RNF113AO15541 343 aaKnown RBP16.8■□□□□ 0.28
TPM1-230ENST00000561266 TBC1D12O60347 775 aa16.8■□□□□ 0.28
TPM1-230ENST00000561266 ZBTB48P10074 688 aaPredicted RBP16.8■□□□□ 0.28
TPM1-230ENST00000561266 CYP2D6P10635 497 aa16.8■□□□□ 0.28
TPM1-230ENST00000561266 USP5P45974 858 aa16.8■□□□□ 0.28
TPM1-230ENST00000561266 PLCD1P51178 756 aa16.8■□□□□ 0.28
TPM1-230ENST00000561266 LBX1P52954 281 aa16.8■□□□□ 0.28
TPM1-230ENST00000561266 NOL9Q5SY16 702 aaKnown RBP16.8■□□□□ 0.28
TPM1-230ENST00000561266 TMED8Q6PL24 325 aaPredicted RBP16.8■□□□□ 0.28
TPM1-230ENST00000561266 METTL16Q86W50 562 aaKnown RBP16.8■□□□□ 0.28
TPM1-230ENST00000561266 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.8■□□□□ 0.28
TPM1-230ENST00000561266 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.8■□□□□ 0.28
TPM1-230ENST00000561266 M0R2C6 588 aa16.79■□□□□ 0.28
TPM1-230ENST00000561266 IRF6O14896 467 aa16.79■□□□□ 0.28
TPM1-230ENST00000561266 TRPA1O75762 1119 aa16.79■□□□□ 0.28
TPM1-230ENST00000561266 DCP1AQ9NPI6 582 aaPredicted RBP16.79■□□□□ 0.28
TPM1-230ENST00000561266 PI4KBQ9UBF8 816 aa16.79■□□□□ 0.28
TPM1-230ENST00000561266 ZBTB47Q9UFB7 747 aaPredicted RBP16.79■□□□□ 0.28
TPM1-230ENST00000561266 CYP2D7A0A087X1C5 515 aa16.78■□□□□ 0.28
TPM1-230ENST00000561266 COL13A1Q5TAT6 717 aaPredicted RBP16.78■□□□□ 0.28
TPM1-230ENST00000561266 SKAP1Q86WV1 359 aa16.78■□□□□ 0.28
TPM1-230ENST00000561266 ERO1BQ86YB8 467 aa16.78■□□□□ 0.28
TPM1-230ENST00000561266 BRI3BPQ8WY22 251 aa16.78■□□□□ 0.28
TPM1-230ENST00000561266 AIDAQ96BJ3 306 aa16.78■□□□□ 0.28
TPM1-230ENST00000561266 STRBPQ96SI9 672 aaKnown RBP16.78■□□□□ 0.28
TPM1-230ENST00000561266 CRNKL1Q9BZJ0 848 aaKnown RBP16.78■□□□□ 0.28
TPM1-230ENST00000561266 DHX36Q9H2U1 1008 aaKnown RBP16.78■□□□□ 0.28
TPM1-230ENST00000561266 TESPA1A2RU30 521 aaPredicted RBP16.77■□□□□ 0.28
TPM1-230ENST00000561266 PTPRAP18433 802 aa16.77■□□□□ 0.28
TPM1-230ENST00000561266 CTCFP49711 727 aaPredicted RBP16.77■□□□□ 0.28
TPM1-230ENST00000561266 SCYL3Q8IZE3 742 aa16.77■□□□□ 0.28
TPM1-230ENST00000561266 APPBP2Q92624 585 aa16.77■□□□□ 0.28
TPM1-230ENST00000561266 FSD1Q9BTV5 496 aa16.77■□□□□ 0.28
TPM1-230ENST00000561266 OSBPL3Q9H4L5 887 aa16.77■□□□□ 0.28
TPM1-230ENST00000561266 MANSC4A6NHS7 340 aaPredicted RBP16.76■□□□□ 0.27
TPM1-230ENST00000561266 TBC1D8O95759 1140 aa16.76■□□□□ 0.27
TPM1-230ENST00000561266 PPIL2Q13356 520 aa16.76■□□□□ 0.27
TPM1-230ENST00000561266 MOGSQ13724 837 aa16.76■□□□□ 0.27
TPM1-230ENST00000561266 ZMYM1Q5SVZ6 1142 aa16.76■□□□□ 0.27
TPM1-230ENST00000561266 ZSCAN25Q6NSZ9 544 aa16.76■□□□□ 0.27
TPM1-230ENST00000561266 CCDC129Q6ZRS4 1044 aa16.76■□□□□ 0.27
TPM1-230ENST00000561266 IFNL1Q8IU54 200 aa16.76■□□□□ 0.27
TPM1-230ENST00000561266 CERS3Q8IU89 383 aa16.76■□□□□ 0.27
TPM1-230ENST00000561266 FOXP4Q8IVH2 680 aaPredicted RBP16.76■□□□□ 0.27
TPM1-230ENST00000561266 GSG1L2A8MUP6 293 aa16.75■□□□□ 0.27
TPM1-230ENST00000561266 CTNND1O60716 968 aaKnown RBP16.75■□□□□ 0.27
TPM1-230ENST00000561266 CAP2P40123 477 aa16.75■□□□□ 0.27
TPM1-230ENST00000561266 PPATQ06203 517 aa16.75■□□□□ 0.27
TPM1-230ENST00000561266 GABPAQ06546 454 aa16.75■□□□□ 0.27
TPM1-230ENST00000561266 BEGAINQ9BUH8 593 aa16.75■□□□□ 0.27
TPM1-230ENST00000561266 MCM9Q9NXL9 1143 aa16.75■□□□□ 0.27
TPM1-230ENST00000561266 HERC5Q9UII4 1024 aaKnown RBP16.75■□□□□ 0.27
TPM1-230ENST00000561266 SLC4A4Q9Y6R1 1079 aa16.75■□□□□ 0.27
TPM1-230ENST00000561266 CCL15-CCL14A0A0B4J2E2 113 aa16.74■□□□□ 0.27
TPM1-230ENST00000561266 FOXP2O15409 715 aa16.74■□□□□ 0.27
TPM1-230ENST00000561266 GPAA1O43292 621 aa16.74■□□□□ 0.27
TPM1-230ENST00000561266 GDF11O95390 407 aa16.74■□□□□ 0.27
TPM1-230ENST00000561266 SREBF2Q12772 1141 aa16.74■□□□□ 0.27
TPM1-230ENST00000561266 CCL15Q16663 113 aa16.74■□□□□ 0.27
TPM1-230ENST00000561266 REM2Q8IYK8 340 aaPredicted RBP16.74■□□□□ 0.27
TPM1-230ENST00000561266 FAM43AQ8N2R8 423 aa16.74■□□□□ 0.27
TPM1-230ENST00000561266 SLC44A5Q8NCS7 719 aa16.74■□□□□ 0.27
TPM1-230ENST00000561266 EVI5LQ96CN4 794 aa16.74■□□□□ 0.27
TPM1-230ENST00000561266 DYNLL2Q96FJ2 89 aa16.74■□□□□ 0.27
TPM1-230ENST00000561266 EPB41L4AQ9HCS5 686 aaPredicted RBP16.74■□□□□ 0.27
TPM1-230ENST00000561266 KCNH4Q9UQ05 1017 aa16.74■□□□□ 0.27
TPM1-230ENST00000561266 AFG3L2Q9Y4W6 797 aa16.74■□□□□ 0.27
TPM1-230ENST00000561266 ZHX2Q9Y6X8 837 aa16.74■□□□□ 0.27
TPM1-230ENST00000561266 MYH8P13535 1937 aa16.74■□□□□ 0.27
TPM1-230ENST00000561266 USP17L12C9JPN9 530 aa16.73■□□□□ 0.27
TPM1-230ENST00000561266 USP17L21D6R901 530 aa16.73■□□□□ 0.27
TPM1-230ENST00000561266 POLR3DP05423 398 aaPredicted RBP16.73■□□□□ 0.27
TPM1-230ENST00000561266 ZFYP08048 801 aaPredicted RBP16.73■□□□□ 0.27
TPM1-230ENST00000561266 SHMT1P34896 483 aa16.73■□□□□ 0.27
TPM1-230ENST00000561266 DGKZQ13574 1117 aa16.73■□□□□ 0.27
TPM1-230ENST00000561266 TATDN1Q6P1N9 297 aa16.73■□□□□ 0.27
TPM1-230ENST00000561266 CTR9Q6PD62 1173 aa16.73■□□□□ 0.27
TPM1-230ENST00000561266 CRACR2BQ8N4Y2 399 aaPredicted RBP16.73■□□□□ 0.27
TPM1-230ENST00000561266 FAM227BQ96M60 508 aa16.73■□□□□ 0.27
TPM1-230ENST00000561266 EHD4Q9H223 541 aa16.73■□□□□ 0.27
TPM1-230ENST00000561266 ATP8A2Q9NTI2 1148 aa16.73■□□□□ 0.27
TPM1-230ENST00000561266 SAGE1Q9NXZ1 904 aa16.73■□□□□ 0.27
TPM1-230ENST00000561266 A0A0D9SFI3 127 aa16.72■□□□□ 0.27
TPM1-230ENST00000561266 BTBD19C9JJ37 291 aa16.72■□□□□ 0.27
TPM1-230ENST00000561266 CA12O43570 354 aa16.72■□□□□ 0.27
TPM1-230ENST00000561266 HLA-DOAP06340 250 aa16.72■□□□□ 0.27
TPM1-230ENST00000561266 GSPT1P15170 499 aaKnown RBP16.72■□□□□ 0.27
TPM1-230ENST00000561266 GTF2A2P52657 109 aa16.72■□□□□ 0.27
TPM1-230ENST00000561266 C12orf60Q5U649 245 aa16.72■□□□□ 0.27
TPM1-230ENST00000561266 TTC6Q86TZ1 520 aa16.72■□□□□ 0.27
TPM1-230ENST00000561266 RILPL2Q969X0 211 aa16.72■□□□□ 0.27
TPM1-230ENST00000561266 SERPINB13Q9UIV8 391 aa16.72■□□□□ 0.27
TPM1-230ENST00000561266 TRIM6-TRIM34B2RNG4 842 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms