RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 AFF1P51825 1210 aaKnown RBP8.45□□□□□ -1.06
LRRC28-220ENST00000561253 LCE2AQ5TA79 106 aaPredicted RBP8.45□□□□□ -1.06
LRRC28-220ENST00000561253 ZNF385CQ66K41 422 aaPredicted RBP8.45□□□□□ -1.06
LRRC28-220ENST00000561253 C8orf86Q6ZUL3 223 aa8.45□□□□□ -1.06
LRRC28-220ENST00000561253 IL22RA1Q8N6P7 574 aa8.45□□□□□ -1.06
LRRC28-220ENST00000561253 CLEC4MQ9H2X3 399 aaPredicted RBP8.45□□□□□ -1.06
LRRC28-220ENST00000561253 RRAGCQ9HB90 399 aa8.45□□□□□ -1.06
LRRC28-220ENST00000561253 SH2B1Q9NRF2 756 aaPredicted RBP8.45□□□□□ -1.06
LRRC28-220ENST00000561253 SOX13Q9UN79 622 aa8.45□□□□□ -1.06
LRRC28-220ENST00000561253 TMEM94Q12767 1356 aa8.45□□□□□ -1.06
LRRC28-220ENST00000561253 FAM135BQ49AJ0 1406 aa8.45□□□□□ -1.06
LRRC28-220ENST00000561253 NCOA3Q9Y6Q9 1424 aa8.45□□□□□ -1.06
LRRC28-220ENST00000561253 IQSEC2Q5JU85 1478 aa8.45□□□□□ -1.06
LRRC28-220ENST00000561253 TRPM1Q7Z4N2 1603 aa8.44□□□□□ -1.06
LRRC28-220ENST00000561253 KNDC1Q76NI1 1749 aa8.44□□□□□ -1.06
LRRC28-220ENST00000561253 ZNF76P36508 570 aa8.44□□□□□ -1.06
LRRC28-220ENST00000561253 GRIK5Q16478 980 aa8.44□□□□□ -1.06
LRRC28-220ENST00000561253 RPS26P11Q5JNZ5 115 aaPredicted RBP8.44□□□□□ -1.06
LRRC28-220ENST00000561253 ADAMTSL4Q6UY14 1074 aa8.44□□□□□ -1.06
LRRC28-220ENST00000561253 WFDC8Q8IUA0 241 aa8.44□□□□□ -1.06
LRRC28-220ENST00000561253 PRDM6Q9NQX0 595 aa8.44□□□□□ -1.06
LRRC28-220ENST00000561253 METTL5Q9NRN9 209 aaKnown RBP8.44□□□□□ -1.06
LRRC28-220ENST00000561253 PPME1Q9Y570 386 aa8.44□□□□□ -1.06
LRRC28-220ENST00000561253 XIRP1Q702N8 1843 aaKnown RBP8.44□□□□□ -1.06
LRRC28-220ENST00000561253 PLEKHH1Q9ULM0 1364 aa8.44□□□□□ -1.06
LRRC28-220ENST00000561253 FBXO24O75426 580 aa8.43□□□□□ -1.06
LRRC28-220ENST00000561253 CDC25BP30305 580 aa8.43□□□□□ -1.06
LRRC28-220ENST00000561253 PCDH1Q08174 1060 aa8.43□□□□□ -1.06
LRRC28-220ENST00000561253 TPTE2Q6XPS3 522 aa8.43□□□□□ -1.06
LRRC28-220ENST00000561253 VN1R5Q7Z5H4 357 aa8.43□□□□□ -1.06
LRRC28-220ENST00000561253 RNF34Q969K3 372 aa8.43□□□□□ -1.06
LRRC28-220ENST00000561253 CEP44Q9C0F1 390 aa8.43□□□□□ -1.06
LRRC28-220ENST00000561253 GPN3Q9UHW5 284 aaPredicted RBP8.43□□□□□ -1.06
LRRC28-220ENST00000561253 H3BRJ5 948 aa8.42□□□□□ -1.06
LRRC28-220ENST00000561253 WIPF1O43516 503 aa8.42□□□□□ -1.06
LRRC28-220ENST00000561253 EPHA1P21709 976 aa8.42□□□□□ -1.06
LRRC28-220ENST00000561253 IKBKEQ14164 716 aa8.42□□□□□ -1.06
LRRC28-220ENST00000561253 CCDC85BQ15834 202 aaPredicted RBP8.42□□□□□ -1.06
LRRC28-220ENST00000561253 MSL1Q68DK7 614 aa8.42□□□□□ -1.06
LRRC28-220ENST00000561253 FAM117BQ6P1L5 589 aa8.42□□□□□ -1.06
LRRC28-220ENST00000561253 ANKRD24Q8TF21 1146 aa8.42□□□□□ -1.06
LRRC28-220ENST00000561253 IGSF5Q9NSI5 407 aa8.42□□□□□ -1.06
LRRC28-220ENST00000561253 ADGRL3Q9HAR2 1447 aa8.42□□□□□ -1.06
LRRC28-220ENST00000561253 DGKGP49619 791 aa8.41□□□□□ -1.06
LRRC28-220ENST00000561253 FANCCQ00597 558 aa8.41□□□□□ -1.06
LRRC28-220ENST00000561253 HS2ST1Q7LGA3 356 aa8.41□□□□□ -1.06
LRRC28-220ENST00000561253 WAPLQ7Z5K2 1190 aa8.41□□□□□ -1.06
LRRC28-220ENST00000561253 SEC31BQ9NQW1 1179 aa8.41□□□□□ -1.06
LRRC28-220ENST00000561253 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.4□□□□□ -1.06
LRRC28-220ENST00000561253 DCCP43146 1447 aa8.4□□□□□ -1.06
LRRC28-220ENST00000561253 ROCK2O75116 1388 aaKnown RBP8.4□□□□□ -1.06
LRRC28-220ENST00000561253 LINC01387J3KSC0 135 aa8.4□□□□□ -1.06
LRRC28-220ENST00000561253 ESRRAP11474 423 aaPredicted RBP8.4□□□□□ -1.06
LRRC28-220ENST00000561253 BAG6P46379 1132 aa8.4□□□□□ -1.06
LRRC28-220ENST00000561253 ZNF157P51786 506 aaPredicted RBP8.4□□□□□ -1.06
LRRC28-220ENST00000561253 HDLBPQ00341 1268 aaKnown RBP8.4□□□□□ -1.06
LRRC28-220ENST00000561253 PPP2R3AQ06190 1150 aa8.4□□□□□ -1.06
LRRC28-220ENST00000561253 FAAP100Q0VG06 881 aa8.4□□□□□ -1.06
LRRC28-220ENST00000561253 TXNDC11Q6PKC3 985 aa8.4□□□□□ -1.06
LRRC28-220ENST00000561253 SV2BQ7L1I2 683 aa8.4□□□□□ -1.06
LRRC28-220ENST00000561253 DDX54Q8TDD1 881 aaKnown RBP8.4□□□□□ -1.06
LRRC28-220ENST00000561253 NECAB3Q96P71 396 aaPredicted RBP8.4□□□□□ -1.06
LRRC28-220ENST00000561253 NOC4LQ9BVI4 516 aaKnown RBP8.4□□□□□ -1.06
LRRC28-220ENST00000561253 STK26Q9P289 416 aa8.4□□□□□ -1.06
LRRC28-220ENST00000561253 ARHGEF28Q8N1W1 1705 aaKnown RBP8.4□□□□□ -1.07
LRRC28-220ENST00000561253 B3GALT4O96024 378 aa8.39□□□□□ -1.07
LRRC28-220ENST00000561253 NID1P14543 1247 aa8.39□□□□□ -1.07
LRRC28-220ENST00000561253 ARL4DP49703 201 aa8.39□□□□□ -1.07
LRRC28-220ENST00000561253 ZNF423Q2M1K9 1284 aa8.39□□□□□ -1.07
LRRC28-220ENST00000561253 C9orf131Q5VYM1 1079 aa8.39□□□□□ -1.07
LRRC28-220ENST00000561253 DMRTC2Q8IXT2 367 aaPredicted RBP8.39□□□□□ -1.07
LRRC28-220ENST00000561253 SLC7A3Q8WY07 619 aa8.39□□□□□ -1.07
LRRC28-220ENST00000561253 PRAM1Q96QH2 718 aa8.39□□□□□ -1.07
LRRC28-220ENST00000561253 TMEM39AQ9NV64 488 aa8.39□□□□□ -1.07
LRRC28-220ENST00000561253 GGT7Q9UJ14 662 aa8.39□□□□□ -1.07
LRRC28-220ENST00000561253 ADGRB2O60241 1585 aa8.39□□□□□ -1.07
LRRC28-220ENST00000561253 SBNO2Q9Y2G9 1366 aa8.38□□□□□ -1.07
LRRC28-220ENST00000561253 NALCNQ8IZF0 1738 aa8.38□□□□□ -1.07
LRRC28-220ENST00000561253 ARHGEF15O94989 841 aa8.38□□□□□ -1.07
LRRC28-220ENST00000561253 PIP4K2BP78356 416 aa8.38□□□□□ -1.07
LRRC28-220ENST00000561253 TRAPPC3LQ5T215 181 aa8.38□□□□□ -1.07
LRRC28-220ENST00000561253 C19orf44Q9H6X5 657 aa8.38□□□□□ -1.07
LRRC28-220ENST00000561253 CDC42BPGQ6DT37 1551 aa8.38□□□□□ -1.07
LRRC28-220ENST00000561253 MST1RQ04912 1400 aa8.37□□□□□ -1.07
LRRC28-220ENST00000561253 PIK3R2O00459 728 aa8.37□□□□□ -1.07
LRRC28-220ENST00000561253 SOX1O00570 391 aaPredicted RBP8.37□□□□□ -1.07
LRRC28-220ENST00000561253 FSCN2O14926 492 aa8.37□□□□□ -1.07
LRRC28-220ENST00000561253 CELA3AP09093 270 aa8.37□□□□□ -1.07
LRRC28-220ENST00000561253 RLBP1P12271 317 aa8.37□□□□□ -1.07
LRRC28-220ENST00000561253 NT5DC4Q86YG4 428 aa8.37□□□□□ -1.07
LRRC28-220ENST00000561253 ZSCAN1Q8NBB4 408 aa8.37□□□□□ -1.07
LRRC28-220ENST00000561253 WNT8BQ93098 351 aa8.37□□□□□ -1.07
LRRC28-220ENST00000561253 TESK2Q96S53 571 aa8.37□□□□□ -1.07
LRRC28-220ENST00000561253 SAMM50Q9Y512 469 aa8.37□□□□□ -1.07
LRRC28-220ENST00000561253 ENC1O14682 589 aa8.36□□□□□ -1.07
LRRC28-220ENST00000561253 HOXB4P17483 251 aaPredicted RBP8.36□□□□□ -1.07
LRRC28-220ENST00000561253 ERCC5P28715 1186 aaPredicted RBP8.36□□□□□ -1.07
LRRC28-220ENST00000561253 GSTM4Q03013 218 aa8.36□□□□□ -1.07
LRRC28-220ENST00000561253 C19orf57Q0VDD7 668 aa8.36□□□□□ -1.07
LRRC28-220ENST00000561253 COL9A3Q14050 684 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms