RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 A0A1B0GTH6 734 aa18.75■□□□□ 0.59
TPM1-228ENST00000560975 ZNF213O14771 459 aa18.75■□□□□ 0.59
TPM1-228ENST00000560975 TRIM29Q14134 588 aa18.75■□□□□ 0.59
TPM1-228ENST00000560975 AFAP1L1Q8TED9 768 aa18.75■□□□□ 0.59
TPM1-228ENST00000560975 DACH1Q9UI36 760 aa18.75■□□□□ 0.59
TPM1-228ENST00000560975 ACBD3Q9H3P7 528 aa18.75■□□□□ 0.59
TPM1-228ENST00000560975 DEF6Q9H4E7 631 aa18.75■□□□□ 0.59
TPM1-228ENST00000560975 MARF1Q9Y4F3 1742 aaKnown RBP18.75■□□□□ 0.59
TPM1-228ENST00000560975 MORC3Q14149 939 aa18.75■□□□□ 0.59
TPM1-228ENST00000560975 RABEP2Q9H5N1 569 aa18.75■□□□□ 0.59
TPM1-228ENST00000560975 GEMIN8Q9NWZ8 242 aaKnown RBP18.75■□□□□ 0.59
TPM1-228ENST00000560975 PPFIA4O75335 1185 aa18.74■□□□□ 0.59
TPM1-228ENST00000560975 RASGRP2Q7LDG7 609 aa18.74■□□□□ 0.59
TPM1-228ENST00000560975 PUS7LQ9H0K6 701 aaKnown RBP18.74■□□□□ 0.59
TPM1-228ENST00000560975 ZMYM6O95789 1325 aa18.74■□□□□ 0.59
TPM1-228ENST00000560975 CASP1P29466 404 aa18.74■□□□□ 0.59
TPM1-228ENST00000560975 BRMS1Q9HCU9 246 aa18.74■□□□□ 0.59
TPM1-228ENST00000560975 MED4Q9NPJ6 270 aa18.74■□□□□ 0.59
TPM1-228ENST00000560975 LTN1O94822 1766 aa18.73■□□□□ 0.59
TPM1-228ENST00000560975 TSPOAP1O95153 1857 aa18.73■□□□□ 0.59
TPM1-228ENST00000560975 FXR1P51114 621 aaKnown RBP eCLIP18.73■□□□□ 0.59
TPM1-228ENST00000560975 USP49Q70CQ1 688 aa18.73■□□□□ 0.59
TPM1-228ENST00000560975 ZNF496Q96IT1 587 aaPredicted RBP18.73■□□□□ 0.59
TPM1-228ENST00000560975 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.73■□□□□ 0.59
TPM1-228ENST00000560975 EID1Q9Y6B2 187 aa18.73■□□□□ 0.59
TPM1-228ENST00000560975 MFAP3LO75121 409 aa18.73■□□□□ 0.59
TPM1-228ENST00000560975 ZMYND10O75800 440 aa18.73■□□□□ 0.59
TPM1-228ENST00000560975 SYF2O95926 243 aaKnown RBP18.73■□□□□ 0.59
TPM1-228ENST00000560975 IARSP41252 1262 aaKnown RBP18.73■□□□□ 0.59
TPM1-228ENST00000560975 PLCD1P51178 756 aa18.73■□□□□ 0.59
TPM1-228ENST00000560975 PIP4K2BP78356 416 aa18.73■□□□□ 0.59
TPM1-228ENST00000560975 DNAJC21Q5F1R6 531 aaKnown RBP18.73■□□□□ 0.59
TPM1-228ENST00000560975 CYB5R4Q7L1T6 521 aa18.73■□□□□ 0.59
TPM1-228ENST00000560975 SMYD4Q8IYR2 804 aaPredicted RBP18.73■□□□□ 0.59
TPM1-228ENST00000560975 CDC25AP30304 524 aa18.72■□□□□ 0.59
TPM1-228ENST00000560975 WHAMMP3Q1A5X7 153 aa18.72■□□□□ 0.59
TPM1-228ENST00000560975 NFXL1Q6ZNB6 911 aa18.72■□□□□ 0.59
TPM1-228ENST00000560975 MSL3Q8N5Y2 521 aaKnown RBP18.72■□□□□ 0.59
TPM1-228ENST00000560975 RBM33Q96EV2 1170 aaKnown RBP18.72■□□□□ 0.59
TPM1-228ENST00000560975 PUS3Q9BZE2 481 aaKnown RBP18.72■□□□□ 0.59
TPM1-228ENST00000560975 MYO6Q9UM54 1294 aa18.72■□□□□ 0.59
TPM1-228ENST00000560975 LMO7Q8WWI1 1683 aa18.72■□□□□ 0.59
TPM1-228ENST00000560975 BTBD18B2RXH4 712 aa18.72■□□□□ 0.59
TPM1-228ENST00000560975 ENC1O14682 589 aa18.72■□□□□ 0.59
TPM1-228ENST00000560975 CCT6AP40227 531 aaKnown RBP18.72■□□□□ 0.59
TPM1-228ENST00000560975 AFMP43652 599 aa18.72■□□□□ 0.59
TPM1-228ENST00000560975 CPLX2Q6PUV4 134 aaKnown RBP18.72■□□□□ 0.59
TPM1-228ENST00000560975 SLF1Q9BQI6 1058 aa18.72■□□□□ 0.59
TPM1-228ENST00000560975 NAA15Q9BXJ9 866 aaKnown RBP18.72■□□□□ 0.59
TPM1-228ENST00000560975 SLC26A6Q9BXS9 759 aa18.72■□□□□ 0.59
TPM1-228ENST00000560975 ANGEL1Q9UNK9 670 aaKnown RBP18.72■□□□□ 0.59
TPM1-228ENST00000560975 APTXQ7Z2E3 356 aaKnown RBP18.71■□□□□ 0.59
TPM1-228ENST00000560975 TADA2BQ86TJ2 420 aa18.71■□□□□ 0.59
TPM1-228ENST00000560975 SMARCC1Q92922 1105 aaPredicted RBP18.71■□□□□ 0.59
TPM1-228ENST00000560975 KCNJ14Q9UNX9 436 aa18.71■□□□□ 0.59
TPM1-228ENST00000560975 RANBP6O60518 1105 aaKnown RBP18.71■□□□□ 0.59
TPM1-228ENST00000560975 CDKL5O76039 1030 aa18.71■□□□□ 0.59
TPM1-228ENST00000560975 SARSP49591 514 aaKnown RBP18.71■□□□□ 0.59
TPM1-228ENST00000560975 LIG3P49916 1009 aa18.71■□□□□ 0.59
TPM1-228ENST00000560975 PI16Q6UXB8 463 aa18.71■□□□□ 0.59
TPM1-228ENST00000560975 EFCAB13Q8IY85 973 aa18.71■□□□□ 0.59
TPM1-228ENST00000560975 GSPT2Q8IYD1 628 aaKnown RBP18.71■□□□□ 0.59
TPM1-228ENST00000560975 HINFPQ9BQA5 517 aa18.71■□□□□ 0.59
TPM1-228ENST00000560975 HDAC6Q9UBN7 1215 aa18.71■□□□□ 0.59
TPM1-228ENST00000560975 TRIM10Q9UDY6 481 aa18.71■□□□□ 0.59
TPM1-228ENST00000560975 TTF2Q9UNY4 1162 aaKnown RBP18.71■□□□□ 0.59
TPM1-228ENST00000560975 GYPCP04921 128 aa18.71■□□□□ 0.59
TPM1-228ENST00000560975 ADORA1P30542 326 aa18.71■□□□□ 0.59
TPM1-228ENST00000560975 FOXO4P98177 505 aa18.71■□□□□ 0.59
TPM1-228ENST00000560975 TUBB2AQ13885 445 aa18.71■□□□□ 0.59
TPM1-228ENST00000560975 CCDC82Q8N4S0 544 aa18.71■□□□□ 0.59
TPM1-228ENST00000560975 CCDC148Q8NFR7 591 aa18.71■□□□□ 0.59
TPM1-228ENST00000560975 TUBB2BQ9BVA1 445 aa18.71■□□□□ 0.59
TPM1-228ENST00000560975 CD44P16070 742 aaKnown RBP18.7■□□□□ 0.58
TPM1-228ENST00000560975 ERVK-24P63145 666 aa18.7■□□□□ 0.58
TPM1-228ENST00000560975 LMOD2Q6P5Q4 547 aa18.7■□□□□ 0.58
TPM1-228ENST00000560975 APOA5Q6Q788 366 aa18.7■□□□□ 0.58
TPM1-228ENST00000560975 NCAPGQ9BPX3 1015 aa18.7■□□□□ 0.58
TPM1-228ENST00000560975 GUCA1BQ9UMX6 200 aa18.7■□□□□ 0.58
TPM1-228ENST00000560975 B4E1Z4 1266 aa18.7■□□□□ 0.58
TPM1-228ENST00000560975 GPAA1O43292 621 aa18.7■□□□□ 0.58
TPM1-228ENST00000560975 APPP05067 770 aa18.7■□□□□ 0.58
TPM1-228ENST00000560975 IL15P40933 162 aaPredicted RBP18.7■□□□□ 0.58
TPM1-228ENST00000560975 TOB1P50616 345 aaPredicted RBP18.7■□□□□ 0.58
TPM1-228ENST00000560975 CASP7P55210 303 aa18.7■□□□□ 0.58
TPM1-228ENST00000560975 SCARF1Q14162 830 aa18.7■□□□□ 0.58
TPM1-228ENST00000560975 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.7■□□□□ 0.58
TPM1-228ENST00000560975 MYCBPQ99417 103 aaPredicted RBP18.7■□□□□ 0.58
TPM1-228ENST00000560975 ADD3Q9UEY8 706 aaKnown RBP18.7■□□□□ 0.58
TPM1-228ENST00000560975 PHF8Q9UPP1 1060 aa18.7■□□□□ 0.58
TPM1-228ENST00000560975 UBN2Q6ZU65 1347 aa18.7■□□□□ 0.58
TPM1-228ENST00000560975 CPDO75976 1380 aa18.69■□□□□ 0.58
TPM1-228ENST00000560975 GOLGA8AA7E2F4 631 aa18.69■□□□□ 0.58
TPM1-228ENST00000560975 CEBPAP49715 358 aaPredicted RBP18.69■□□□□ 0.58
TPM1-228ENST00000560975 NT5DC1Q5TFE4 455 aa18.69■□□□□ 0.58
TPM1-228ENST00000560975 TBC1D10CQ8IV04 446 aa18.69■□□□□ 0.58
TPM1-228ENST00000560975 CAPZA3Q96KX2 299 aa18.69■□□□□ 0.58
TPM1-228ENST00000560975 INCENPQ9NQS7 918 aa18.69■□□□□ 0.58
TPM1-228ENST00000560975 FBXO2Q9UK22 296 aaPredicted RBP18.69■□□□□ 0.58
TPM1-228ENST00000560975 WWC3Q9ULE0 1092 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms