RNA–Protein interactions for RNA: ENST00000560885.5

USP8-213, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-213ENST00000560885 RPAP1Q9BWH6 1393 aaPredicted RBP8.11□□□□□ -1.11
USP8-213ENST00000560885 MAST3O60307 1309 aa8.11□□□□□ -1.11
USP8-213ENST00000560885 MROH5Q6ZUA9 1318 aa8.11□□□□□ -1.11
USP8-213ENST00000560885 FANCIQ9NVI1 1328 aa8.11□□□□□ -1.11
USP8-213ENST00000560885 F6X3S4 739 aa8.11□□□□□ -1.11
USP8-213ENST00000560885 DPYSL4O14531 572 aa8.11□□□□□ -1.11
USP8-213ENST00000560885 MAP3K7O43318 606 aa8.11□□□□□ -1.11
USP8-213ENST00000560885 FRAT2O75474 233 aaPredicted RBP8.11□□□□□ -1.11
USP8-213ENST00000560885 ALDH1L1O75891 902 aa8.11□□□□□ -1.11
USP8-213ENST00000560885 HOXD10P28358 340 aa8.11□□□□□ -1.11
USP8-213ENST00000560885 CAVIN4Q5BKX8 364 aa8.11□□□□□ -1.11
USP8-213ENST00000560885 DCAF15Q66K64 600 aa8.11□□□□□ -1.11
USP8-213ENST00000560885 FBXO33Q7Z6M2 555 aa8.11□□□□□ -1.11
USP8-213ENST00000560885 ANKRD23Q86SG2 305 aa8.11□□□□□ -1.11
USP8-213ENST00000560885 DPF3Q92784 378 aa8.11□□□□□ -1.11
USP8-213ENST00000560885 HTATIP2Q9BUP3 242 aa8.11□□□□□ -1.11
USP8-213ENST00000560885 SRRDQ9UH36 339 aa8.11□□□□□ -1.11
USP8-213ENST00000560885 SUGT1Q9Y2Z0 365 aa8.11□□□□□ -1.11
USP8-213ENST00000560885 RIPOR2Q9Y4F9 1068 aa8.11□□□□□ -1.11
USP8-213ENST00000560885 DOCK2Q92608 1830 aa8.1□□□□□ -1.11
USP8-213ENST00000560885 LAMA2P24043 3122 aaKnown RBP8.1□□□□□ -1.11
USP8-213ENST00000560885 DNAH12Q6ZR08 3092 aa8.1□□□□□ -1.11
USP8-213ENST00000560885 UNC80Q8N2C7 3258 aa8.1□□□□□ -1.11
USP8-213ENST00000560885 PTPRFP10586 1907 aa8.1□□□□□ -1.11
USP8-213ENST00000560885 GJB1P08034 283 aa8.1□□□□□ -1.11
USP8-213ENST00000560885 GRK4P32298 578 aa8.1□□□□□ -1.11
USP8-213ENST00000560885 PSMC4P43686 418 aa8.1□□□□□ -1.11
USP8-213ENST00000560885 GJA8P48165 433 aa8.1□□□□□ -1.11
USP8-213ENST00000560885 CACNB3P54284 484 aa8.1□□□□□ -1.11
USP8-213ENST00000560885 PRSS12P56730 875 aa8.1□□□□□ -1.11
USP8-213ENST00000560885 MTFR1Q15390 333 aa8.1□□□□□ -1.11
USP8-213ENST00000560885 GRIK5Q16478 980 aa8.1□□□□□ -1.11
USP8-213ENST00000560885 UBE2Q1Q7Z7E8 422 aa8.1□□□□□ -1.11
USP8-213ENST00000560885 WDR63Q8IWG1 891 aa8.1□□□□□ -1.11
USP8-213ENST00000560885 RAET1EQ8TD07 263 aa8.1□□□□□ -1.11
USP8-213ENST00000560885 SHISA4Q96DD7 197 aa8.1□□□□□ -1.11
USP8-213ENST00000560885 CDCA7LQ96GN5 454 aa8.1□□□□□ -1.11
USP8-213ENST00000560885 TRIM47Q96LD4 638 aa8.1□□□□□ -1.11
USP8-213ENST00000560885 PUS3Q9BZE2 481 aaKnown RBP8.1□□□□□ -1.11
USP8-213ENST00000560885 RBM27Q9P2N5 1060 aaKnown RBP8.1□□□□□ -1.11
USP8-213ENST00000560885 NR2E3Q9Y5X4 410 aa8.1□□□□□ -1.11
USP8-213ENST00000560885 ADGRA2Q96PE1 1338 aa8.09□□□□□ -1.11
USP8-213ENST00000560885 PDHXO00330 501 aa8.09□□□□□ -1.11
USP8-213ENST00000560885 PDE8BO95263 885 aa8.09□□□□□ -1.11
USP8-213ENST00000560885 FMNL1O95466 1100 aaPredicted RBP8.09□□□□□ -1.11
USP8-213ENST00000560885 CCL5P13501 91 aa8.09□□□□□ -1.11
USP8-213ENST00000560885 CAPN2P17655 700 aa8.09□□□□□ -1.11
USP8-213ENST00000560885 OSBPP22059 807 aa8.09□□□□□ -1.11
USP8-213ENST00000560885 CTGFP29279 349 aa8.09□□□□□ -1.11
USP8-213ENST00000560885 EXOSC9Q06265 439 aaKnown RBP8.09□□□□□ -1.11
USP8-213ENST00000560885 CHAF1AQ13111 956 aaPredicted RBP8.09□□□□□ -1.11
USP8-213ENST00000560885 NBR1Q14596 966 aa8.09□□□□□ -1.11
USP8-213ENST00000560885 APOBEC3HQ6NTF7 200 aaKnown RBP8.09□□□□□ -1.11
USP8-213ENST00000560885 HHIPL2Q6UWX4 724 aa8.09□□□□□ -1.11
USP8-213ENST00000560885 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.09□□□□□ -1.11
USP8-213ENST00000560885 FAM151AQ8WW52 585 aa8.09□□□□□ -1.11
USP8-213ENST00000560885 DDX12PQ92771 950 aa8.09□□□□□ -1.11
USP8-213ENST00000560885 ZNF341Q9BYN7 854 aa8.09□□□□□ -1.11
USP8-213ENST00000560885 SRCIN1Q9C0H9 1055 aa8.09□□□□□ -1.11
USP8-213ENST00000560885 PRO3102Q9H379 93 aa8.09□□□□□ -1.11
USP8-213ENST00000560885 CPA4Q9UI42 421 aa8.09□□□□□ -1.11
USP8-213ENST00000560885 ZNF112Q9UJU3 913 aa8.09□□□□□ -1.11
USP8-213ENST00000560885 IQSEC3Q9UPP2 1182 aaPredicted RBP8.09□□□□□ -1.11
USP8-213ENST00000560885 KCNH4Q9UQ05 1017 aa8.09□□□□□ -1.11
USP8-213ENST00000560885 PHIPQ8WWQ0 1821 aa8.08□□□□□ -1.12
USP8-213ENST00000560885 UTYO14607 1347 aa8.08□□□□□ -1.12
USP8-213ENST00000560885 MYPNQ86TC9 1320 aa8.08□□□□□ -1.12
USP8-213ENST00000560885 KIF16BQ96L93 1317 aa8.08□□□□□ -1.12
USP8-213ENST00000560885 ALPK3Q96L96 1907 aa8.08□□□□□ -1.12
USP8-213ENST00000560885 MYH2Q9UKX2 1941 aa8.08□□□□□ -1.12
USP8-213ENST00000560885 A0A1W2PPC1 479 aa8.08□□□□□ -1.12
USP8-213ENST00000560885 INPP5BP32019 993 aa8.08□□□□□ -1.12
USP8-213ENST00000560885 UBXN2AP68543 259 aa8.08□□□□□ -1.12
USP8-213ENST00000560885 METTL24Q5JXM2 366 aa8.08□□□□□ -1.12
USP8-213ENST00000560885 VGLL2Q8N8G2 317 aa8.08□□□□□ -1.12
USP8-213ENST00000560885 ZNF516Q92618 1163 aa8.08□□□□□ -1.12
USP8-213ENST00000560885 KAZALD1Q96I82 304 aa8.08□□□□□ -1.12
USP8-213ENST00000560885 SUCLG2Q96I99 432 aa8.08□□□□□ -1.12
USP8-213ENST00000560885 RNF208Q9H0X6 261 aa8.08□□□□□ -1.12
USP8-213ENST00000560885 BIN2Q9UBW5 565 aaPredicted RBP8.08□□□□□ -1.12
USP8-213ENST00000560885 DOCK1Q14185 1865 aa8.07□□□□□ -1.12
USP8-213ENST00000560885 CXCL11O14625 94 aa8.07□□□□□ -1.12
USP8-213ENST00000560885 DGAT1O75907 488 aa8.07□□□□□ -1.12
USP8-213ENST00000560885 NBPF7P0C2Y1 421 aaPredicted RBP8.07□□□□□ -1.12
USP8-213ENST00000560885 FCGRTP55899 365 aa8.07□□□□□ -1.12
USP8-213ENST00000560885 MOGSQ13724 837 aa8.07□□□□□ -1.12
USP8-213ENST00000560885 TSR1Q2NL82 804 aaKnown RBP8.07□□□□□ -1.12
USP8-213ENST00000560885 RABL6Q3YEC7 729 aaPredicted RBP8.07□□□□□ -1.12
USP8-213ENST00000560885 LRRC24Q50LG9 513 aa8.07□□□□□ -1.12
USP8-213ENST00000560885 NOL9Q5SY16 702 aaKnown RBP8.07□□□□□ -1.12
USP8-213ENST00000560885 SLC4A10Q6U841 1118 aa8.07□□□□□ -1.12
USP8-213ENST00000560885 MIGA2Q7L4E1 593 aa8.07□□□□□ -1.12
USP8-213ENST00000560885 WDR66Q8TBY9 1149 aa8.07□□□□□ -1.12
USP8-213ENST00000560885 U2AF1L4Q8WU68 220 aaKnown RBP8.07□□□□□ -1.12
USP8-213ENST00000560885 TATDN2Q93075 761 aa8.07□□□□□ -1.12
USP8-213ENST00000560885 PARK7Q99497 189 aaKnown RBP8.07□□□□□ -1.12
USP8-213ENST00000560885 BICC1Q9H694 974 aaKnown RBP8.07□□□□□ -1.12
USP8-213ENST00000560885 SPDYE16A6NNV3 312 aaPredicted RBP8.06□□□□□ -1.12
USP8-213ENST00000560885 ZBTB7BO15156 539 aaPredicted RBP8.06□□□□□ -1.12
USP8-213ENST00000560885 FARP2O94887 1054 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms