RNA–Protein interactions for RNA: ENST00000560527.1

USP8-211, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 4

Gene USP8, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-211ENST00000560527 PPP1R9AQ9ULJ8 1098 aa6.07□□□□□ -1.44
USP8-211ENST00000560527 HIF3AQ9Y2N7 669 aa6.07□□□□□ -1.44
USP8-211ENST00000560527 TLR3O15455 904 aaKnown RBP6.06□□□□□ -1.44
USP8-211ENST00000560527 FGRP09769 529 aa6.06□□□□□ -1.44
USP8-211ENST00000560527 IMPDH2P12268 514 aa6.06□□□□□ -1.44
USP8-211ENST00000560527 C2CD4AQ8NCU7 369 aaPredicted RBP6.06□□□□□ -1.44
USP8-211ENST00000560527 ARMC5Q96C12 935 aa6.06□□□□□ -1.44
USP8-211ENST00000560527 DISC1Q9NRI5 854 aa6.06□□□□□ -1.44
USP8-211ENST00000560527 GINM1Q9NU53 330 aa6.06□□□□□ -1.44
USP8-211ENST00000560527 ADAM30Q9UKF2 790 aa6.06□□□□□ -1.44
USP8-211ENST00000560527 AP4E1Q9UPM8 1137 aa6.06□□□□□ -1.44
USP8-211ENST00000560527 EFR3BQ9Y2G0 817 aa6.06□□□□□ -1.44
USP8-211ENST00000560527 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.05□□□□□ -1.44
USP8-211ENST00000560527 DCDC2CA8MYV0 355 aa6.05□□□□□ -1.44
USP8-211ENST00000560527 SART1O43290 800 aaKnown RBP6.05□□□□□ -1.44
USP8-211ENST00000560527 DYRK3O43781 588 aa6.05□□□□□ -1.44
USP8-211ENST00000560527 ALX3O95076 343 aa6.05□□□□□ -1.44
USP8-211ENST00000560527 GLB1P16278 677 aa6.05□□□□□ -1.44
USP8-211ENST00000560527 PREPP48147 710 aa6.05□□□□□ -1.44
USP8-211ENST00000560527 IREB2P48200 963 aaKnown RBP6.05□□□□□ -1.44
USP8-211ENST00000560527 CDK8P49336 464 aa6.05□□□□□ -1.44
USP8-211ENST00000560527 NKAPLQ5M9Q1 402 aa6.05□□□□□ -1.44
USP8-211ENST00000560527 TMEM201Q5SNT2 666 aa6.05□□□□□ -1.44
USP8-211ENST00000560527 ZBTB37Q5TC79 503 aa6.05□□□□□ -1.44
USP8-211ENST00000560527 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.05□□□□□ -1.44
USP8-211ENST00000560527 C12orf40Q86WS4 652 aa6.05□□□□□ -1.44
USP8-211ENST00000560527 KCT2Q8NC54 265 aa6.05□□□□□ -1.44
USP8-211ENST00000560527 WNT10AQ9GZT5 417 aa6.05□□□□□ -1.44
USP8-211ENST00000560527 GOLGA2P5Q9HBQ8 144 aa6.05□□□□□ -1.44
USP8-211ENST00000560527 BRMS1Q9HCU9 246 aa6.05□□□□□ -1.44
USP8-211ENST00000560527 PRKAG2Q9UGJ0 569 aa6.05□□□□□ -1.44
USP8-211ENST00000560527 POLR3KQ9Y2Y1 108 aaPredicted RBP6.05□□□□□ -1.44
USP8-211ENST00000560527 ACTL7BQ9Y614 415 aa6.05□□□□□ -1.44
USP8-211ENST00000560527 DRD2P14416 443 aa6.04□□□□□ -1.44
USP8-211ENST00000560527 DNAJA1P31689 397 aaKnown RBP6.04□□□□□ -1.44
USP8-211ENST00000560527 NTF4P34130 210 aa6.04□□□□□ -1.44
USP8-211ENST00000560527 CAP2P40123 477 aa6.04□□□□□ -1.44
USP8-211ENST00000560527 ASPAP45381 313 aa6.04□□□□□ -1.44
USP8-211ENST00000560527 NASPP49321 788 aaPredicted RBP6.04□□□□□ -1.44
USP8-211ENST00000560527 MLECQ14165 292 aa6.04□□□□□ -1.44
USP8-211ENST00000560527 LRRFIP1Q32MZ4 808 aaKnown RBP6.04□□□□□ -1.44
USP8-211ENST00000560527 DYMQ7RTS9 669 aa6.04□□□□□ -1.44
USP8-211ENST00000560527 RBBP8NLQ8NC74 664 aaPredicted RBP6.04□□□□□ -1.44
USP8-211ENST00000560527 ZNF507Q8TCN5 953 aa6.04□□□□□ -1.44
USP8-211ENST00000560527 DRC1Q96MC2 740 aa6.04□□□□□ -1.44
USP8-211ENST00000560527 UBL7Q96S82 380 aaPredicted RBP6.04□□□□□ -1.44
USP8-211ENST00000560527 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.04□□□□□ -1.443e-14■■■□□ 16.5
USP8-211ENST00000560527 SSBP4Q9BWG4 385 aaPredicted RBP6.04□□□□□ -1.44
USP8-211ENST00000560527 YIPF2Q9BWQ6 316 aa6.04□□□□□ -1.44
USP8-211ENST00000560527 TANGO6Q9C0B7 1094 aa6.04□□□□□ -1.44
USP8-211ENST00000560527 TPSG1Q9NRR2 321 aa6.04□□□□□ -1.44
USP8-211ENST00000560527 ZNRF3Q9ULT6 936 aa6.04□□□□□ -1.44
USP8-211ENST00000560527 PRAMEF27A3QJZ7 478 aa6.03□□□□□ -1.44
USP8-211ENST00000560527 GAS2O43903 313 aaKnown RBP6.03□□□□□ -1.44
USP8-211ENST00000560527 HTR3BO95264 441 aa6.03□□□□□ -1.44
USP8-211ENST00000560527 ATP2B1P20020 1258 aa6.03□□□□□ -1.44
USP8-211ENST00000560527 MCM4P33991 863 aa6.03□□□□□ -1.44
USP8-211ENST00000560527 TTLL4Q14679 1199 aa6.03□□□□□ -1.44
USP8-211ENST00000560527 PPM1JQ5JR12 505 aa6.03□□□□□ -1.44
USP8-211ENST00000560527 MCF2L2Q86YR7 1114 aa6.03□□□□□ -1.44
USP8-211ENST00000560527 EZH1Q92800 747 aaPredicted RBP6.03□□□□□ -1.44
USP8-211ENST00000560527 MYRFLQ96LU7 910 aa6.03□□□□□ -1.44
USP8-211ENST00000560527 ACSS3Q9H6R3 686 aa6.03□□□□□ -1.44
USP8-211ENST00000560527 PIDD1Q9HB75 910 aa6.03□□□□□ -1.44
USP8-211ENST00000560527 PICK1Q9NRD5 415 aa6.03□□□□□ -1.44
USP8-211ENST00000560527 FAM105AQ9NUU6 356 aa6.03□□□□□ -1.44
USP8-211ENST00000560527 PCDHB14Q9Y5E9 798 aa6.03□□□□□ -1.44
USP8-211ENST00000560527 MEIS3P2A8K0S8 358 aa6.02□□□□□ -1.45
USP8-211ENST00000560527 NEFMP07197 916 aa6.02□□□□□ -1.45
USP8-211ENST00000560527 GRK4P32298 578 aa6.02□□□□□ -1.45
USP8-211ENST00000560527 ETF1P62495 437 aaKnown RBP6.02□□□□□ -1.45
USP8-211ENST00000560527 CLCQ05315 142 aa6.02□□□□□ -1.45
USP8-211ENST00000560527 LRP8Q14114 963 aa6.02□□□□□ -1.45
USP8-211ENST00000560527 PRSS36Q5K4E3 855 aa6.02□□□□□ -1.45
USP8-211ENST00000560527 GK5Q6ZS86 529 aa6.02□□□□□ -1.45
USP8-211ENST00000560527 HID1Q8IV36 788 aa6.02□□□□□ -1.45
USP8-211ENST00000560527 SMYD4Q8IYR2 804 aaPredicted RBP6.02□□□□□ -1.45
USP8-211ENST00000560527 OR6P1Q8NGX9 317 aa6.02□□□□□ -1.45
USP8-211ENST00000560527 UTP4Q969X6 686 aaKnown RBP6.02□□□□□ -1.45
USP8-211ENST00000560527 MEGF10Q96KG7 1140 aa6.02□□□□□ -1.45
USP8-211ENST00000560527 FERD3LQ96RJ6 166 aa6.02□□□□□ -1.45
USP8-211ENST00000560527 SRRTQ9BXP5 876 aaKnown RBP6.02□□□□□ -1.45
USP8-211ENST00000560527 CSADQ9Y600 493 aa6.02□□□□□ -1.45
USP8-211ENST00000560527 GRIN3BO60391 1043 aa6.01□□□□□ -1.45
USP8-211ENST00000560527 SSBP05455 408 aaKnown RBP eCLIP6.01□□□□□ -1.45
USP8-211ENST00000560527 PGRP06401 933 aa6.01□□□□□ -1.45
USP8-211ENST00000560527 PLCG1P19174 1290 aa6.01□□□□□ -1.45
USP8-211ENST00000560527 USP11P51784 963 aa6.01□□□□□ -1.45
USP8-211ENST00000560527 SLC6A19Q695T7 634 aa6.01□□□□□ -1.45
USP8-211ENST00000560527 CDC37L1Q7L3B6 337 aa6.01□□□□□ -1.45
USP8-211ENST00000560527 MCATQ8IVS2 390 aaKnown RBP6.01□□□□□ -1.45
USP8-211ENST00000560527 FAM20CQ8IXL6 584 aa6.01□□□□□ -1.45
USP8-211ENST00000560527 MRPL41Q8IXM3 137 aaKnown RBP6.01□□□□□ -1.45
USP8-211ENST00000560527 ARMC10Q8N2F6 343 aa6.01□□□□□ -1.45
USP8-211ENST00000560527 UBXN4Q92575 508 aa6.01□□□□□ -1.45
USP8-211ENST00000560527 ISL2Q96A47 359 aa6.01□□□□□ -1.45
USP8-211ENST00000560527 GMIPQ9P107 970 aa6.01□□□□□ -1.45
USP8-211ENST00000560527 REV1Q9UBZ9 1251 aa6.01□□□□□ -1.45
USP8-211ENST00000560527 PCOLCE2Q9UKZ9 415 aa6.01□□□□□ -1.45
USP8-211ENST00000560527 DHX15O43143 795 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms