RNA–Protein interactions for RNA: ENST00000560509.5

BLM-208, Transcript of Bloom syndrome RecQ like helicase, humanhuman

TSL 1 (best) BASIC

Gene BLM, Length 3,966 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BLM-208ENST00000560509 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.3□□□□□ -1.72
BLM-208ENST00000560509 USHBP1Q8N6Y0 703 aa4.3□□□□□ -1.72
BLM-208ENST00000560509 AKAP2Q9Y2D5 859 aa4.3□□□□□ -1.72
BLM-208ENST00000560509 EMILIN1Q9Y6C2 1016 aa4.3□□□□□ -1.72
BLM-208ENST00000560509 ABCA3Q99758 1704 aa4.3□□□□□ -1.72
BLM-208ENST00000560509 ERICH4A6NGS2 130 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 C19orf81C9J6K1 198 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 CHL1O00533 1208 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 SPTLC2O15270 562 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 CDC45O75419 566 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 FMNL1O95466 1100 aaPredicted RBP4.29□□□□□ -1.72
BLM-208ENST00000560509 MYCLP1P12525 358 aaPredicted RBP4.29□□□□□ -1.72
BLM-208ENST00000560509 ZNF24P17028 368 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 MAGEA10P43363 369 aaPredicted RBP4.29□□□□□ -1.72
BLM-208ENST00000560509 ATP1A2P50993 1020 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 CCDC92Q53HC0 331 aaPredicted RBP4.29□□□□□ -1.72
BLM-208ENST00000560509 CATIPQ7Z7H3 387 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 ZSCAN30Q86W11 494 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 HOMER1Q86YM7 354 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 SIRT2Q8IXJ6 389 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 RABGGTAQ92696 567 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 RWDD1Q9H446 243 aaPredicted RBP4.29□□□□□ -1.72
BLM-208ENST00000560509 FAM217BQ9NTX9 383 aaPredicted RBP4.29□□□□□ -1.72
BLM-208ENST00000560509 BRWD3Q6RI45 1802 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 POTEB2H3BUK9 544 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 FRAT2O75474 233 aaPredicted RBP4.29□□□□□ -1.72
BLM-208ENST00000560509 GCP02774 474 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 MMEP08473 750 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 MVPQ14764 893 aaKnown RBP4.29□□□□□ -1.72
BLM-208ENST00000560509 VPS72Q15906 364 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 C10orf62Q5T681 223 aaPredicted RBP4.29□□□□□ -1.72
BLM-208ENST00000560509 SFMBT2Q5VUG0 894 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 SLF2Q8IX21 1173 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 OXER1Q8TDS5 423 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 PARP2Q9UGN5 583 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 TMEM98Q9Y2Y6 226 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 FAM208AQ9UK61 1670 aaKnown RBP4.29□□□□□ -1.72
BLM-208ENST00000560509 TPPPO94811 219 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 TRIM27P14373 513 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 NOS2P35228 1153 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 MAPRE1Q15691 268 aaKnown RBP4.29□□□□□ -1.72
BLM-208ENST00000560509 SLC5A9Q2M3M2 681 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 SMUG1Q53HV7 270 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 ZNF746Q6NUN9 644 aaPredicted RBP4.29□□□□□ -1.72
BLM-208ENST00000560509 PACS1Q6VY07 963 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 ALYREFQ86V81 257 aaKnown RBP4.29□□□□□ -1.72
BLM-208ENST00000560509 CCDC24Q8N4L8 307 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 APPL2Q8NEU8 664 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 CPLX3Q8WVH0 158 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 APPBP2Q92624 585 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 CLIP3Q96DZ5 547 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 SCLT1Q96NL6 688 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 IFT122Q9HBG6 1241 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 CASS4Q9NQ75 786 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 RABL2AQ9UBK7 228 aaPredicted RBP4.29□□□□□ -1.72
BLM-208ENST00000560509 IP6K2Q9UHH9 426 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 ADAMTS7Q9UKP4 1686 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 GPR37O15354 613 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 XRCC6P12956 609 aaKnown RBP eCLIP4.29□□□□□ -1.72
BLM-208ENST00000560509 MAPK8P45983 427 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 PSMC1P62191 440 aaKnown RBP4.29□□□□□ -1.72
BLM-208ENST00000560509 UBE4AQ14139 1066 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 SLC9A5Q14940 896 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 TUSC1Q2TAM9 212 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 KIAA1211Q6ZU35 1233 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 VPS52Q8N1B4 723 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 FAM184AQ8NB25 1140 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 SLC16A10Q8TF71 515 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 CLP1Q92989 425 aaKnown RBP4.29□□□□□ -1.72
BLM-208ENST00000560509 SYTL4Q96C24 671 aaPredicted RBP4.29□□□□□ -1.72
BLM-208ENST00000560509 POLR3CQ9BUI4 534 aaPredicted RBP4.29□□□□□ -1.72
BLM-208ENST00000560509 ZBTB3Q9H5J0 574 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 CYLDQ9NQC7 956 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 RBM28Q9NW13 759 aaKnown RBP4.29□□□□□ -1.72
BLM-208ENST00000560509 BTG4Q9NY30 223 aa4.29□□□□□ -1.72
BLM-208ENST00000560509 ADGRL3Q9HAR2 1447 aa4.28□□□□□ -1.72
BLM-208ENST00000560509 PIK3C2AO00443 1686 aa4.28□□□□□ -1.72
BLM-208ENST00000560509 LILRB3O75022 631 aa4.28□□□□□ -1.72
BLM-208ENST00000560509 LDHBP07195 334 aaKnown RBP4.28□□□□□ -1.72
BLM-208ENST00000560509 TMPOP42166 694 aaKnown RBP4.28□□□□□ -1.72
BLM-208ENST00000560509 TMEM62Q0P6H9 643 aa4.28□□□□□ -1.72
BLM-208ENST00000560509 ACAP1Q15027 740 aa4.28□□□□□ -1.72
BLM-208ENST00000560509 CCDC178Q5BJE1 867 aa4.28□□□□□ -1.72
BLM-208ENST00000560509 KSR2Q6VAB6 950 aa4.28□□□□□ -1.72
BLM-208ENST00000560509 DDX54Q8TDD1 881 aaKnown RBP4.28□□□□□ -1.72
BLM-208ENST00000560509 SH3TC2Q8TF17 1288 aa4.28□□□□□ -1.72
BLM-208ENST00000560509 TMEM87BQ96K49 555 aa4.28□□□□□ -1.72
BLM-208ENST00000560509 GPHNQ9NQX3 736 aaPredicted RBP4.28□□□□□ -1.72
BLM-208ENST00000560509 RAPGEFL1Q9UHV5 662 aa4.28□□□□□ -1.72
BLM-208ENST00000560509 PHRF1Q9P1Y6 1649 aaKnown RBP4.28□□□□□ -1.72
BLM-208ENST00000560509 F8VZ95 297 aa4.28□□□□□ -1.72
BLM-208ENST00000560509 ZSCAN9O15535 394 aaPredicted RBP4.28□□□□□ -1.72
BLM-208ENST00000560509 KINO60870 393 aaKnown RBP4.28□□□□□ -1.72
BLM-208ENST00000560509 PDGFRBP09619 1106 aa4.28□□□□□ -1.72
BLM-208ENST00000560509 GLULP15104 373 aa4.28□□□□□ -1.72
BLM-208ENST00000560509 PAK2Q13177 524 aa4.28□□□□□ -1.72
BLM-208ENST00000560509 JAZF1Q86VZ6 243 aa4.28□□□□□ -1.72
BLM-208ENST00000560509 RNF135Q8IUD6 432 aa4.28□□□□□ -1.72
BLM-208ENST00000560509 RPAP2Q8IXW5 612 aaPredicted RBP4.28□□□□□ -1.72
BLM-208ENST00000560509 ARL10Q8N8L6 244 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms