RNA–Protein interactions for RNA: ENST00000560328.1

NEO1-208, Transcript of neogenin 1, human

TSL 1 (best)

Gene NEO1, Length 5,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEO1-208	ENST00000560328	TEKT1	Q969V4	418 aa		10.52	□□□□□ -0.72
NEO1-208	ENST00000560328	TRPC5	Q9UL62	973 aa	Predicted RBP	10.52	□□□□□ -0.72
NEO1-208	ENST00000560328	LUC7L2	Q9Y383	392 aa	Known RBP	10.52	□□□□□ -0.72
NEO1-208	ENST00000560328	ALK	Q9UM73	1620 aa		10.52	□□□□□ -0.72
NEO1-208	ENST00000560328	POLR3G	O15318	223 aa	Predicted RBP	10.52	□□□□□ -0.73
NEO1-208	ENST00000560328	KIF5A	Q12840	1032 aa		10.52	□□□□□ -0.73
NEO1-208	ENST00000560328	MAP4K1	Q92918	833 aa		10.52	□□□□□ -0.73
NEO1-208	ENST00000560328	GLI2	P10070	1586 aa		10.52	□□□□□ -0.73
NEO1-208	ENST00000560328	PFKFB2	O60825	505 aa		10.52	□□□□□ -0.73
NEO1-208	ENST00000560328	TACC1	O75410	805 aa		10.52	□□□□□ -0.73
NEO1-208	ENST00000560328	CKAP4	Q07065	602 aa	Known RBP	10.52	□□□□□ -0.73
NEO1-208	ENST00000560328	UBE3C	Q15386	1083 aa		10.52	□□□□□ -0.73
NEO1-208	ENST00000560328	DLGAP5	Q15398	846 aa		10.52	□□□□□ -0.73
NEO1-208	ENST00000560328	MAPK8IP1	Q9UQF2	711 aa		10.52	□□□□□ -0.73
NEO1-208	ENST00000560328	CTAGE15	A4D2H0	777 aa		10.52	□□□□□ -0.73
NEO1-208	ENST00000560328	TRAF5	O00463	557 aa		10.52	□□□□□ -0.73
NEO1-208	ENST00000560328	CTAGE8	P0CG41	777 aa		10.52	□□□□□ -0.73
NEO1-208	ENST00000560328	UBE4A	Q14139	1066 aa		10.52	□□□□□ -0.73
NEO1-208	ENST00000560328	FAM182B	Q5T319	152 aa		10.52	□□□□□ -0.73
NEO1-208	ENST00000560328	CTAGE6	Q86UF2	777 aa		10.52	□□□□□ -0.73
NEO1-208	ENST00000560328	CTAGE4	Q8IX94	777 aa		10.52	□□□□□ -0.73
NEO1-208	ENST00000560328	RNF216	Q9NWF9	866 aa	Predicted RBP	10.52	□□□□□ -0.73
NEO1-208	ENST00000560328	SPATA31A3	Q5VYP0	1347 aa		10.52	□□□□□ -0.73
NEO1-208	ENST00000560328	ZNF804B	A4D1E1	1349 aa		10.51	□□□□□ -0.73
NEO1-208	ENST00000560328	DYNC1I1	O14576	645 aa		10.51	□□□□□ -0.73
NEO1-208	ENST00000560328	KRT86	O43790	486 aa		10.51	□□□□□ -0.73
NEO1-208	ENST00000560328	RPL13	P26373	211 aa	Known RBP	10.51	□□□□□ -0.73
NEO1-208	ENST00000560328	KCNQ4	P56696	695 aa		10.51	□□□□□ -0.73
NEO1-208	ENST00000560328	SPHKAP	Q2M3C7	1700 aa		10.51	□□□□□ -0.73
NEO1-208	ENST00000560328	HOOK3	Q86VS8	718 aa		10.51	□□□□□ -0.73
NEO1-208	ENST00000560328	NIM1K	Q8IY84	436 aa		10.51	□□□□□ -0.73
NEO1-208	ENST00000560328	TMOD4	Q9NZQ9	345 aa		10.51	□□□□□ -0.73
NEO1-208	ENST00000560328	ADD1	P35611	737 aa	Known RBP	10.51	□□□□□ -0.73
NEO1-208	ENST00000560328	IMPG2	Q9BZV3	1241 aa		10.51	□□□□□ -0.73
NEO1-208	ENST00000560328	SYNC	Q9H7C4	482 aa		10.51	□□□□□ -0.73
NEO1-208	ENST00000560328	LZTFL1	Q9NQ48	299 aa		10.51	□□□□□ -0.73
NEO1-208	ENST00000560328	SEC31B	Q9NQW1	1179 aa		10.51	□□□□□ -0.73
NEO1-208	ENST00000560328	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	10.51	□□□□□ -0.73
NEO1-208	ENST00000560328	ECM2	O94769	699 aa	Predicted RBP	10.51	□□□□□ -0.73
NEO1-208	ENST00000560328	PPP1R2	P41236	205 aa		10.51	□□□□□ -0.73
NEO1-208	ENST00000560328	USH1G	Q495M9	461 aa		10.51	□□□□□ -0.73
NEO1-208	ENST00000560328	HAUS3	Q68CZ6	603 aa		10.51	□□□□□ -0.73
NEO1-208	ENST00000560328	NLRP10	Q86W26	655 aa		10.51	□□□□□ -0.73
NEO1-208	ENST00000560328	LRWD1	Q9UFC0	647 aa		10.51	□□□□□ -0.73
NEO1-208	ENST00000560328	CTAGE9	A4FU28	777 aa		10.51	□□□□□ -0.73
NEO1-208	ENST00000560328	BAG6	P46379	1132 aa		10.51	□□□□□ -0.73
NEO1-208	ENST00000560328	KARS	Q15046	597 aa	Known RBP	10.51	□□□□□ -0.73
NEO1-208	ENST00000560328	DOK7	Q18PE1	504 aa		10.51	□□□□□ -0.73
NEO1-208	ENST00000560328	ZMYM1	Q5SVZ6	1142 aa		10.51	□□□□□ -0.73
NEO1-208	ENST00000560328	CNNM4	Q6P4Q7	775 aa		10.51	□□□□□ -0.73
NEO1-208	ENST00000560328	RASEF	Q8IZ41	740 aa		10.51	□□□□□ -0.73
NEO1-208	ENST00000560328	ADCY9	O60503	1353 aa		10.51	□□□□□ -0.73
NEO1-208	ENST00000560328	GOLGA6L7	A0A1B0GV03	622 aa		10.51	□□□□□ -0.73
NEO1-208	ENST00000560328	TUBB4A	P04350	444 aa		10.51	□□□□□ -0.73
NEO1-208	ENST00000560328	KIAA0753	Q2KHM9	967 aa		10.51	□□□□□ -0.73
NEO1-208	ENST00000560328	ADCK5	Q3MIX3	580 aa		10.51	□□□□□ -0.73
NEO1-208	ENST00000560328	FANCB	Q8NB91	859 aa		10.51	□□□□□ -0.73
NEO1-208	ENST00000560328	FAM212A	Q96EL1	285 aa		10.51	□□□□□ -0.73
NEO1-208	ENST00000560328	GUCA1B	Q9UMX6	200 aa		10.51	□□□□□ -0.73
NEO1-208	ENST00000560328	AXIN2	Q9Y2T1	843 aa		10.51	□□□□□ -0.73
NEO1-208	ENST00000560328	TNKS	O95271	1327 aa		10.5	□□□□□ -0.73
NEO1-208	ENST00000560328	ZNF445	P59923	1031 aa		10.5	□□□□□ -0.73
NEO1-208	ENST00000560328	DCAF17	Q5H9S7	520 aa	Predicted RBP	10.5	□□□□□ -0.73
NEO1-208	ENST00000560328	MYSM1	Q5VVJ2	828 aa		10.5	□□□□□ -0.73
NEO1-208	ENST00000560328	C2CD5	Q86YS7	1000 aa		10.5	□□□□□ -0.73
NEO1-208	ENST00000560328	CNGA4	Q8IV77	575 aa		10.5	□□□□□ -0.73
NEO1-208	ENST00000560328	CBX8	Q9HC52	389 aa		10.5	□□□□□ -0.73
NEO1-208	ENST00000560328	CYP27B1	O15528	508 aa		10.5	□□□□□ -0.73
NEO1-208	ENST00000560328	ERFE	Q4G0M1	354 aa		10.5	□□□□□ -0.73
NEO1-208	ENST00000560328	FAM196A	Q6ZSG2	479 aa		10.5	□□□□□ -0.73
NEO1-208	ENST00000560328	NOC4L	Q9BVI4	516 aa	Known RBP	10.5	□□□□□ -0.73
NEO1-208	ENST00000560328	VPS16	Q9H269	839 aa		10.5	□□□□□ -0.73
NEO1-208	ENST00000560328	AKR1B15	C9JRZ8	316 aa	Predicted RBP	10.5	□□□□□ -0.73
NEO1-208	ENST00000560328	SCNN1D	P51172	638 aa		10.5	□□□□□ -0.73
NEO1-208	ENST00000560328	PTPN12	Q05209	780 aa	Known RBP	10.5	□□□□□ -0.73
NEO1-208	ENST00000560328	NLGN1	Q8N2Q7	840 aa		10.5	□□□□□ -0.73
NEO1-208	ENST00000560328	PLVAP	Q9BX97	442 aa		10.5	□□□□□ -0.73
NEO1-208	ENST00000560328	ATG3	Q9NT62	314 aa		10.5	□□□□□ -0.73
NEO1-208	ENST00000560328	NCAPH2	Q6IBW4	605 aa		10.5	□□□□□ -0.73
NEO1-208	ENST00000560328	MLKL	Q8NB16	471 aa		10.5	□□□□□ -0.73
NEO1-208	ENST00000560328	SNX29	Q8TEQ0	813 aa		10.5	□□□□□ -0.73
NEO1-208	ENST00000560328	ZMYM6	O95789	1325 aa		10.5	□□□□□ -0.73
NEO1-208	ENST00000560328	GOLGA6L10	A0A0M3HER8	536 aa		10.5	□□□□□ -0.73
NEO1-208	ENST00000560328	BTD	P43251	543 aa		10.5	□□□□□ -0.73
NEO1-208	ENST00000560328	NLRP12	P59046	1061 aa		10.5	□□□□□ -0.73
NEO1-208	ENST00000560328	CTR9	Q6PD62	1173 aa		10.5	□□□□□ -0.73
NEO1-208	ENST00000560328	CPXCR1	Q8N123	301 aa		10.5	□□□□□ -0.73
NEO1-208	ENST00000560328	BAG1	Q99933	345 aa	Predicted RBP	10.5	□□□□□ -0.73
NEO1-208	ENST00000560328	SELENOO	Q9BVL4	669 aa		10.5	□□□□□ -0.73
NEO1-208	ENST00000560328	ANTXR1	Q9H6X2	564 aa		10.5	□□□□□ -0.73
NEO1-208	ENST00000560328	CPSF1	Q10570	1443 aa	Known RBP	10.49	□□□□□ -0.73
NEO1-208	ENST00000560328	SHTN1	A0MZ66	631 aa		10.49	□□□□□ -0.73
NEO1-208	ENST00000560328	ERVV-1	B6SEH8	477 aa		10.49	□□□□□ -0.73
NEO1-208	ENST00000560328	GCOM1	H8Y6P7	765 aa	Predicted RBP	10.49	□□□□□ -0.73
NEO1-208	ENST00000560328	MYZAP	P0CAP1	466 aa		10.49	□□□□□ -0.73
NEO1-208	ENST00000560328	TBC1D8B	Q0IIM8	1120 aa		10.49	□□□□□ -0.73
NEO1-208	ENST00000560328	POSTN	Q15063	836 aa		10.49	□□□□□ -0.73
NEO1-208	ENST00000560328	CALCRL	Q16602	461 aa		10.49	□□□□□ -0.73
NEO1-208	ENST00000560328	ZNF589	Q86UQ0	364 aa	Predicted RBP	10.49	□□□□□ -0.73
NEO1-208	ENST00000560328	REXO1	Q8N1G1	1221 aa	Known RBP	10.49	□□□□□ -0.73

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