RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 ZGPATQ8N5A5 531 aaKnown RBP20.67■□□□□ 0.9
HERC1-207ENST00000560316 TRIB2Q92519 343 aa20.67■□□□□ 0.9
HERC1-207ENST00000560316 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.67■□□□□ 0.9
HERC1-207ENST00000560316 OGDHLQ9ULD0 1010 aa20.67■□□□□ 0.9
HERC1-207ENST00000560316 CIAO1O76071 339 aa20.66■□□□□ 0.9
HERC1-207ENST00000560316 CCDC102BQ68D86 513 aa20.66■□□□□ 0.9
HERC1-207ENST00000560316 ZNF280CQ8ND82 737 aa20.66■□□□□ 0.9
HERC1-207ENST00000560316 FAM163AQ96GL9 167 aaPredicted RBP20.66■□□□□ 0.9
HERC1-207ENST00000560316 COL25A1Q9BXS0 654 aaPredicted RBP20.66■□□□□ 0.9
HERC1-207ENST00000560316 ASCC2Q9H1I8 757 aaPredicted RBP20.66■□□□□ 0.9
HERC1-207ENST00000560316 PFASO15067 1338 aa20.66■□□□□ 0.9
HERC1-207ENST00000560316 TBC1D12O60347 775 aa20.65■□□□□ 0.9
HERC1-207ENST00000560316 CYP2B6P20813 491 aa20.65■□□□□ 0.9
HERC1-207ENST00000560316 RASGRF1Q13972 1273 aa20.65■□□□□ 0.9
HERC1-207ENST00000560316 SLF2Q8IX21 1173 aa20.65■□□□□ 0.9
HERC1-207ENST00000560316 OSBPL5Q9H0X9 879 aaPredicted RBP20.65■□□□□ 0.9
HERC1-207ENST00000560316 LOC285556D6RIA3 1793 aa20.64■□□□□ 0.9
HERC1-207ENST00000560316 MROH7-TTC4A0A0A0MT08 1334 aa20.64■□□□□ 0.89
HERC1-207ENST00000560316 PEX10O60683 326 aa20.64■□□□□ 0.89
HERC1-207ENST00000560316 PRKAR2AP13861 404 aaKnown RBP20.64■□□□□ 0.89
HERC1-207ENST00000560316 RHBDL3P58872 404 aa20.64■□□□□ 0.89
HERC1-207ENST00000560316 PABPC4Q13310 644 aaKnown RBP eCLIP20.64■□□□□ 0.89
HERC1-207ENST00000560316 RRP1BQ14684 758 aaKnown RBP20.64■□□□□ 0.89
HERC1-207ENST00000560316 SSH1Q8WYL5 1049 aa20.64■□□□□ 0.89
HERC1-207ENST00000560316 FBXO3Q9UK99 471 aa20.64■□□□□ 0.89
HERC1-207ENST00000560316 PA2G4Q9UQ80 394 aaKnown RBP20.64■□□□□ 0.89
HERC1-207ENST00000560316 PLXNB2O15031 1838 aa20.63■□□□□ 0.89
HERC1-207ENST00000560316 MAP3K21Q5TCX8 1036 aa20.63■□□□□ 0.89
HERC1-207ENST00000560316 GPR75-ASB3A0A0A6YYF3 556 aa20.62■□□□□ 0.89
HERC1-207ENST00000560316 IL15P40933 162 aaPredicted RBP20.62■□□□□ 0.89
HERC1-207ENST00000560316 TIMM10P62072 90 aa20.62■□□□□ 0.89
HERC1-207ENST00000560316 MECOMQ03112 1051 aa20.62■□□□□ 0.89
HERC1-207ENST00000560316 SPTY2D1Q68D10 685 aaPredicted RBP20.62■□□□□ 0.89
HERC1-207ENST00000560316 ZNF384Q8TF68 577 aa20.62■□□□□ 0.89
HERC1-207ENST00000560316 USP17L5A8MUK1 530 aa20.61■□□□□ 0.89
HERC1-207ENST00000560316 CAP2P40123 477 aa20.61■□□□□ 0.89
HERC1-207ENST00000560316 MDM2Q00987 491 aaPredicted RBP20.61■□□□□ 0.89
HERC1-207ENST00000560316 MORF4L1Q9UBU8 362 aa20.61■□□□□ 0.89
HERC1-207ENST00000560316 ZBTB22O15209 634 aa20.6■□□□□ 0.89
HERC1-207ENST00000560316 UBTFL1P0CB47 393 aaPredicted RBP20.6■□□□□ 0.89
HERC1-207ENST00000560316 COL6A1P12109 1028 aa20.6■□□□□ 0.89
HERC1-207ENST00000560316 LRRC26Q2I0M4 334 aa20.6■□□□□ 0.89
HERC1-207ENST00000560316 SH3D19Q5HYK7 790 aa20.6■□□□□ 0.89
HERC1-207ENST00000560316 ERICH6Q7L0X2 663 aa20.6■□□□□ 0.89
HERC1-207ENST00000560316 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.6■□□□□ 0.89
HERC1-207ENST00000560316 NUDT12Q9BQG2 462 aa20.6■□□□□ 0.89
HERC1-207ENST00000560316 TBC1D2Q9BYX2 928 aa20.6■□□□□ 0.89
HERC1-207ENST00000560316 PDS5AQ29RF7 1337 aaKnown RBP20.59■□□□□ 0.89
HERC1-207ENST00000560316 NPM3O75607 178 aaKnown RBP20.59■□□□□ 0.89
HERC1-207ENST00000560316 IRX3P78415 501 aaPredicted RBP20.59■□□□□ 0.89
HERC1-207ENST00000560316 CACNB2Q08289 660 aaPredicted RBP20.59■□□□□ 0.89
HERC1-207ENST00000560316 FAM9BQ8IZU0 186 aa20.59■□□□□ 0.89
HERC1-207ENST00000560316 P2RX7Q99572 595 aaKnown RBP20.59■□□□□ 0.89
HERC1-207ENST00000560316 TXNRD2Q9NNW7 524 aa20.59■□□□□ 0.89
HERC1-207ENST00000560316 ATAD5Q96QE3 1844 aa20.59■□□□□ 0.89
HERC1-207ENST00000560316 CCND3P30281 292 aaPredicted RBP20.58■□□□□ 0.89
HERC1-207ENST00000560316 MTMR2Q13614 643 aa20.58■□□□□ 0.89
HERC1-207ENST00000560316 FAM161BQ96MY7 647 aa20.58■□□□□ 0.89
HERC1-207ENST00000560316 GUCD1Q96NT3 240 aa20.58■□□□□ 0.89
HERC1-207ENST00000560316 AS3MTQ9HBK9 375 aa20.58■□□□□ 0.89
HERC1-207ENST00000560316 ZNF521Q96K83 1311 aa20.57■□□□□ 0.88
HERC1-207ENST00000560316 XRCC5P13010 732 aaKnown RBP20.57■□□□□ 0.88
HERC1-207ENST00000560316 ZKSCAN1P17029 563 aaPredicted RBP20.57■□□□□ 0.88
HERC1-207ENST00000560316 CCL14Q16627 93 aa20.57■□□□□ 0.88
HERC1-207ENST00000560316 LHX8Q68G74 356 aa20.57■□□□□ 0.88
HERC1-207ENST00000560316 GPRC5AQ8NFJ5 357 aa20.57■□□□□ 0.88
HERC1-207ENST00000560316 SOCS4Q8WXH5 440 aa20.57■□□□□ 0.88
HERC1-207ENST00000560316 XAGE2Q96GT9 111 aa20.57■□□□□ 0.88
HERC1-207ENST00000560316 LAMA2P24043 3122 aaKnown RBP20.56■□□□□ 0.88
HERC1-207ENST00000560316 A0A1B0GUL7 405 aa20.56■□□□□ 0.88
HERC1-207ENST00000560316 POTEB2H3BUK9 544 aa20.56■□□□□ 0.88
HERC1-207ENST00000560316 HERVK_113P62684 666 aa20.56■□□□□ 0.88
HERC1-207ENST00000560316 PI16Q6UXB8 463 aa20.56■□□□□ 0.88
HERC1-207ENST00000560316 TBC1D9Q6ZT07 1266 aa20.56■□□□□ 0.88
HERC1-207ENST00000560316 COPRSQ9NQ92 184 aa20.56■□□□□ 0.88
HERC1-207ENST00000560316 COL2A1P02458 1487 aaPredicted RBP20.56■□□□□ 0.88
HERC1-207ENST00000560316 BACE1P56817 501 aa20.55■□□□□ 0.88
HERC1-207ENST00000560316 JAG1P78504 1218 aa20.55■□□□□ 0.88
HERC1-207ENST00000560316 PDE3AQ14432 1141 aa20.55■□□□□ 0.88
HERC1-207ENST00000560316 Q3C1V9 767 aa20.55■□□□□ 0.88
HERC1-207ENST00000560316 USP6NLQ92738 828 aa20.55■□□□□ 0.88
HERC1-207ENST00000560316 NSUN4Q96CB9 384 aaKnown RBP20.55■□□□□ 0.88
HERC1-207ENST00000560316 WDR18Q9BV38 432 aa20.55■□□□□ 0.88
HERC1-207ENST00000560316 TMOD4Q9NZQ9 345 aa20.55■□□□□ 0.88
HERC1-207ENST00000560316 LDHCP07864 332 aa20.54■□□□□ 0.88
HERC1-207ENST00000560316 HOXA7P31268 230 aaPredicted RBP20.54■□□□□ 0.88
HERC1-207ENST00000560316 TFCP2Q12800 502 aa20.54■□□□□ 0.88
HERC1-207ENST00000560316 SHROOM1Q2M3G4 852 aaPredicted RBP20.54■□□□□ 0.88
HERC1-207ENST00000560316 TEX11Q8IYF3 940 aa20.54■□□□□ 0.88
HERC1-207ENST00000560316 TRMT44Q8IYL2 757 aaKnown RBP20.54■□□□□ 0.88
HERC1-207ENST00000560316 PORCNQ9H237 461 aa20.54■□□□□ 0.88
HERC1-207ENST00000560316 HMG20BQ9P0W2 317 aa20.54■□□□□ 0.88
HERC1-207ENST00000560316 RBPJLQ9UBG7 517 aa20.54■□□□□ 0.88
HERC1-207ENST00000560316 HERC5Q9UII4 1024 aaKnown RBP20.54■□□□□ 0.88
HERC1-207ENST00000560316 DNAH12Q6ZR08 3092 aa20.53■□□□□ 0.88
HERC1-207ENST00000560316 ANP32CO43423 234 aa20.53■□□□□ 0.88
HERC1-207ENST00000560316 MAP4K4O95819 1239 aaPredicted RBP20.53■□□□□ 0.88
HERC1-207ENST00000560316 MAPK4P31152 587 aa20.53■□□□□ 0.88
HERC1-207ENST00000560316 RGS2P41220 211 aa20.53■□□□□ 0.88
HERC1-207ENST00000560316 GSTO1P78417 241 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms