RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 DNAH12Q6ZR08 3092 aa24.6■■□□□ 1.53
RABGGTA-214ENST00000560163 GPR75-ASB3A0A0A6YYF3 556 aa24.59■■□□□ 1.53
RABGGTA-214ENST00000560163 IL15P40933 162 aaPredicted RBP24.59■■□□□ 1.53
RABGGTA-214ENST00000560163 SPP2Q13103 211 aa24.59■■□□□ 1.53
RABGGTA-214ENST00000560163 DZIP1Q86YF9 867 aaKnown RBP24.59■■□□□ 1.53
RABGGTA-214ENST00000560163 SLF2Q8IX21 1173 aa24.59■■□□□ 1.53
RABGGTA-214ENST00000560163 HMX1Q9NP08 348 aaPredicted RBP24.59■■□□□ 1.53
RABGGTA-214ENST00000560163 Q7L0L9 218 aa24.58■■□□□ 1.53
RABGGTA-214ENST00000560163 OSBPL5Q9H0X9 879 aaPredicted RBP24.58■■□□□ 1.53
RABGGTA-214ENST00000560163 ABCF2Q9UG63 623 aa24.58■■□□□ 1.53
RABGGTA-214ENST00000560163 OGDHLQ9ULD0 1010 aa24.58■■□□□ 1.53
RABGGTA-214ENST00000560163 MROH7-TTC4A0A0A0MT08 1334 aa24.58■■□□□ 1.52
RABGGTA-214ENST00000560163 DDX60LQ5H9U9 1706 aaKnown RBP24.58■■□□□ 1.52
RABGGTA-214ENST00000560163 FAM196BA6NMK8 535 aa24.57■■□□□ 1.52
RABGGTA-214ENST00000560163 MAGEA10P43363 369 aaPredicted RBP24.57■■□□□ 1.52
RABGGTA-214ENST00000560163 ZNF280CQ8ND82 737 aa24.57■■□□□ 1.52
RABGGTA-214ENST00000560163 ASCC2Q9H1I8 757 aaPredicted RBP24.57■■□□□ 1.52
RABGGTA-214ENST00000560163 MTMR10Q9NXD2 777 aa24.57■■□□□ 1.52
RABGGTA-214ENST00000560163 STXBP5LQ9Y2K9 1186 aa24.57■■□□□ 1.52
RABGGTA-214ENST00000560163 SYN1P17600 705 aa24.56■■□□□ 1.52
RABGGTA-214ENST00000560163 MECOMQ03112 1051 aa24.56■■□□□ 1.52
RABGGTA-214ENST00000560163 RRP1BQ14684 758 aaKnown RBP24.56■■□□□ 1.52
RABGGTA-214ENST00000560163 SH3D19Q5HYK7 790 aa24.56■■□□□ 1.52
RABGGTA-214ENST00000560163 MAP3K21Q5TCX8 1036 aa24.56■■□□□ 1.52
RABGGTA-214ENST00000560163 TDHQ8IZJ6 230 aa24.56■■□□□ 1.52
RABGGTA-214ENST00000560163 C11orf49Q9H6J7 331 aa24.56■■□□□ 1.52
RABGGTA-214ENST00000560163 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.56■■□□□ 1.52
RABGGTA-214ENST00000560163 MORF4L1Q9UBU8 362 aa24.56■■□□□ 1.52
RABGGTA-214ENST00000560163 PA2G4Q9UQ80 394 aaKnown RBP24.56■■□□□ 1.52
RABGGTA-214ENST00000560163 HMGCS2P54868 508 aa24.55■■□□□ 1.52
RABGGTA-214ENST00000560163 TIMM10P62072 90 aa24.55■■□□□ 1.52
RABGGTA-214ENST00000560163 SPTY2D1Q68D10 685 aaPredicted RBP24.55■■□□□ 1.52
RABGGTA-214ENST00000560163 TRIB2Q92519 343 aa24.55■■□□□ 1.52
RABGGTA-214ENST00000560163 TBC1D2Q9BYX2 928 aa24.55■■□□□ 1.52
RABGGTA-214ENST00000560163 COPRSQ9NQ92 184 aa24.55■■□□□ 1.52
RABGGTA-214ENST00000560163 COL2A1P02458 1487 aaPredicted RBP24.54■■□□□ 1.52
RABGGTA-214ENST00000560163 UBTFL1P0CB47 393 aaPredicted RBP24.54■■□□□ 1.52
RABGGTA-214ENST00000560163 CAP2P40123 477 aa24.54■■□□□ 1.52
RABGGTA-214ENST00000560163 PABPC4Q13310 644 aaKnown RBP eCLIP24.54■■□□□ 1.52
RABGGTA-214ENST00000560163 PFASO15067 1338 aa24.54■■□□□ 1.52
RABGGTA-214ENST00000560163 ATAD5Q96QE3 1844 aa24.54■■□□□ 1.52
RABGGTA-214ENST00000560163 FAM9BQ8IZU0 186 aa24.53■■□□□ 1.52
RABGGTA-214ENST00000560163 USP17L5A8MUK1 530 aa24.52■■□□□ 1.52
RABGGTA-214ENST00000560163 MAP4K4O95819 1239 aaPredicted RBP24.52■■□□□ 1.52
RABGGTA-214ENST00000560163 COL6A1P12109 1028 aa24.52■■□□□ 1.52
RABGGTA-214ENST00000560163 ANP32CO43423 234 aa24.51■■□□□ 1.51
RABGGTA-214ENST00000560163 ALDH1L2Q3SY69 923 aa24.51■■□□□ 1.51
RABGGTA-214ENST00000560163 ERICH6Q7L0X2 663 aa24.51■■□□□ 1.51
RABGGTA-214ENST00000560163 XRCC5P13010 732 aaKnown RBP24.5■■□□□ 1.51
RABGGTA-214ENST00000560163 NSUN4Q96CB9 384 aaKnown RBP24.5■■□□□ 1.51
RABGGTA-214ENST00000560163 XAGE2Q96GT9 111 aa24.5■■□□□ 1.51
RABGGTA-214ENST00000560163 EYSQ5T1H1 3165 aa24.49■■□□□ 1.51
RABGGTA-214ENST00000560163 VCANP13611 3396 aa24.49■■□□□ 1.51
RABGGTA-214ENST00000560163 A0A1B0GUL7 405 aa24.49■■□□□ 1.51
RABGGTA-214ENST00000560163 PRKAR2AP13861 404 aaKnown RBP24.49■■□□□ 1.51
RABGGTA-214ENST00000560163 CYP2B6P20813 491 aa24.49■■□□□ 1.51
RABGGTA-214ENST00000560163 HOXA7P31268 230 aaPredicted RBP24.49■■□□□ 1.51
RABGGTA-214ENST00000560163 P2RX7Q99572 595 aaKnown RBP24.49■■□□□ 1.51
RABGGTA-214ENST00000560163 WDR18Q9BV38 432 aa24.49■■□□□ 1.51
RABGGTA-214ENST00000560163 UBE2OQ9C0C9 1292 aaKnown RBP24.49■■□□□ 1.51
RABGGTA-214ENST00000560163 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.49■■□□□ 1.51
RABGGTA-214ENST00000560163 E9PSI1 815 aa24.48■■□□□ 1.51
RABGGTA-214ENST00000560163 PEX10O60683 326 aa24.48■■□□□ 1.51
RABGGTA-214ENST00000560163 USP6NLQ92738 828 aa24.48■■□□□ 1.51
RABGGTA-214ENST00000560163 TXNRD2Q9NNW7 524 aa24.48■■□□□ 1.51
RABGGTA-214ENST00000560163 HMG20BQ9P0W2 317 aa24.48■■□□□ 1.51
RABGGTA-214ENST00000560163 BACE1P56817 501 aa24.47■■□□□ 1.51
RABGGTA-214ENST00000560163 LHX8Q68G74 356 aa24.47■■□□□ 1.51
RABGGTA-214ENST00000560163 NUDT12Q9BQG2 462 aa24.47■■□□□ 1.51
RABGGTA-214ENST00000560163 AS3MTQ9HBK9 375 aa24.47■■□□□ 1.51
RABGGTA-214ENST00000560163 HERC5Q9UII4 1024 aaKnown RBP24.47■■□□□ 1.51
RABGGTA-214ENST00000560163 LDHCP07864 332 aa24.46■■□□□ 1.51
RABGGTA-214ENST00000560163 JAG1P78504 1218 aa24.46■■□□□ 1.51
RABGGTA-214ENST00000560163 CACNB2Q08289 660 aaPredicted RBP24.46■■□□□ 1.51
RABGGTA-214ENST00000560163 SLFN5Q08AF3 891 aa24.46■■□□□ 1.51
RABGGTA-214ENST00000560163 TFCP2Q12800 502 aa24.46■■□□□ 1.51
RABGGTA-214ENST00000560163 MVPQ14764 893 aaKnown RBP24.46■■□□□ 1.51
RABGGTA-214ENST00000560163 RBPJLQ9UBG7 517 aa24.46■■□□□ 1.51
RABGGTA-214ENST00000560163 AKAP2Q9Y2D5 859 aa24.46■■□□□ 1.51
RABGGTA-214ENST00000560163 SIPA1L1O43166 1804 aa24.46■■□□□ 1.51
RABGGTA-214ENST00000560163 GSTO1P78417 241 aa24.45■■□□□ 1.5
RABGGTA-214ENST00000560163 POTEEQ6S8J3 1075 aa24.45■■□□□ 1.5
RABGGTA-214ENST00000560163 PI16Q6UXB8 463 aa24.45■■□□□ 1.5
RABGGTA-214ENST00000560163 TBC1D9Q6ZT07 1266 aa24.45■■□□□ 1.5
RABGGTA-214ENST00000560163 GPRC5AQ8NFJ5 357 aa24.45■■□□□ 1.5
RABGGTA-214ENST00000560163 SOCS4Q8WXH5 440 aa24.45■■□□□ 1.5
RABGGTA-214ENST00000560163 HDAC5Q9UQL6 1122 aa24.45■■□□□ 1.5
RABGGTA-214ENST00000560163 POTEB2H3BUK9 544 aa24.44■■□□□ 1.5
RABGGTA-214ENST00000560163 HERVK_113P62684 666 aa24.44■■□□□ 1.5
RABGGTA-214ENST00000560163 IRX3P78415 501 aaPredicted RBP24.44■■□□□ 1.5
RABGGTA-214ENST00000560163 MTMR2Q13614 643 aa24.44■■□□□ 1.5
RABGGTA-214ENST00000560163 LRRC26Q2I0M4 334 aa24.44■■□□□ 1.5
RABGGTA-214ENST00000560163 Q3C1V9 767 aa24.44■■□□□ 1.5
RABGGTA-214ENST00000560163 TRMT44Q8IYL2 757 aaKnown RBP24.44■■□□□ 1.5
RABGGTA-214ENST00000560163 SPATA5Q8NB90 893 aa24.44■■□□□ 1.5
RABGGTA-214ENST00000560163 COL25A1Q9BXS0 654 aaPredicted RBP24.44■■□□□ 1.5
RABGGTA-214ENST00000560163 SMC4Q9NTJ3 1288 aa24.44■■□□□ 1.5
RABGGTA-214ENST00000560163 PI4KBQ9UBF8 816 aa24.44■■□□□ 1.5
RABGGTA-214ENST00000560163 MORN1Q5T089 497 aa24.43■■□□□ 1.5
RABGGTA-214ENST00000560163 FAM109BQ6ICB4 259 aaPredicted RBP24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms