RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 PLCD1P51178 756 aa11.2□□□□□ -0.62
HERC1-206ENST00000559996 ADCK5Q3MIX3 580 aa11.2□□□□□ -0.62
HERC1-206ENST00000559996 C12orf60Q5U649 245 aa11.2□□□□□ -0.62
HERC1-206ENST00000559996 FKBP1CQ5VVH2 108 aa11.2□□□□□ -0.62
HERC1-206ENST00000559996 KIAA1211Q6ZU35 1233 aa11.2□□□□□ -0.62
HERC1-206ENST00000559996 STOX1Q6ZVD7 989 aa11.2□□□□□ -0.62
HERC1-206ENST00000559996 TEPSINQ96N21 525 aa11.2□□□□□ -0.62
HERC1-206ENST00000559996 C22orf23Q9BZE7 217 aa11.2□□□□□ -0.62
HERC1-206ENST00000559996 OSBPL5Q9H0X9 879 aaPredicted RBP11.2□□□□□ -0.62
HERC1-206ENST00000559996 TAF1DQ9H5J8 278 aaPredicted RBP11.2□□□□□ -0.62
HERC1-206ENST00000559996 HACL1Q9UJ83 578 aa11.2□□□□□ -0.62
HERC1-206ENST00000559996 ANAPC4Q9UJX5 808 aa11.2□□□□□ -0.62
HERC1-206ENST00000559996 SNX14Q9Y5W7 946 aa11.2□□□□□ -0.62
HERC1-206ENST00000559996 SCN4AP35499 1836 aa11.2□□□□□ -0.62
HERC1-206ENST00000559996 ENTPD3O75355 529 aa11.19□□□□□ -0.62
HERC1-206ENST00000559996 APPP05067 770 aa11.19□□□□□ -0.62
HERC1-206ENST00000559996 EPHX2P34913 555 aa11.19□□□□□ -0.62
HERC1-206ENST00000559996 USP5P45974 858 aa11.19□□□□□ -0.62
HERC1-206ENST00000559996 GABPAQ06546 454 aa11.19□□□□□ -0.62
HERC1-206ENST00000559996 METTL16Q86W50 562 aaKnown RBP11.19□□□□□ -0.62
HERC1-206ENST00000559996 CDAN1Q8IWY9 1227 aa11.19□□□□□ -0.62
HERC1-206ENST00000559996 NOL10Q9BSC4 688 aaKnown RBP11.19□□□□□ -0.62
HERC1-206ENST00000559996 RRAGCQ9HB90 399 aa11.19□□□□□ -0.62
HERC1-206ENST00000559996 SIPA1L1O43166 1804 aa11.19□□□□□ -0.62
HERC1-206ENST00000559996 MYH1P12882 1939 aa11.18□□□□□ -0.62
HERC1-206ENST00000559996 TCP10L2B9ZVM9 353 aa11.18□□□□□ -0.62
HERC1-206ENST00000559996 HAND2P61296 217 aa11.18□□□□□ -0.62
HERC1-206ENST00000559996 MAP3K10Q02779 954 aa11.18□□□□□ -0.62
HERC1-206ENST00000559996 CTDSPL2Q05D32 466 aa11.18□□□□□ -0.62
HERC1-206ENST00000559996 PPARAQ07869 468 aa11.18□□□□□ -0.62
HERC1-206ENST00000559996 TCP10Q12799 353 aa11.18□□□□□ -0.62
HERC1-206ENST00000559996 PICALMQ13492 652 aa11.18□□□□□ -0.62
HERC1-206ENST00000559996 DLK2Q6UY11 383 aa11.18□□□□□ -0.62
HERC1-206ENST00000559996 USP50Q70EL3 339 aaPredicted RBP11.18□□□□□ -0.62
HERC1-206ENST00000559996 FAM83AQ86UY5 434 aa11.18□□□□□ -0.62
HERC1-206ENST00000559996 TBC1D10CQ8IV04 446 aa11.18□□□□□ -0.62
HERC1-206ENST00000559996 FAM151AQ8WW52 585 aa11.18□□□□□ -0.62
HERC1-206ENST00000559996 NAPBQ9H115 298 aa11.18□□□□□ -0.62
HERC1-206ENST00000559996 MCM9Q9NXL9 1143 aa11.18□□□□□ -0.62
HERC1-206ENST00000559996 SAP30BPQ9UHR5 308 aaKnown RBP11.18□□□□□ -0.62
HERC1-206ENST00000559996 ATRNL1Q5VV63 1379 aa11.17□□□□□ -0.62
HERC1-206ENST00000559996 LMOD1P29536 600 aaPredicted RBP11.17□□□□□ -0.62
HERC1-206ENST00000559996 ANGEL2Q5VTE6 544 aaKnown RBP11.17□□□□□ -0.62
HERC1-206ENST00000559996 DYNLL2Q96FJ2 89 aa11.17□□□□□ -0.62
HERC1-206ENST00000559996 NACAP1Q9BZK3 213 aa11.17□□□□□ -0.62
HERC1-206ENST00000559996 TMEM39BQ9GZU3 492 aa11.17□□□□□ -0.62
HERC1-206ENST00000559996 DNAJC18Q9H819 358 aa11.17□□□□□ -0.62
HERC1-206ENST00000559996 NMRK2Q9NPI5 230 aa11.17□□□□□ -0.62
HERC1-206ENST00000559996 TSHZ2Q9NRE2 1034 aa11.17□□□□□ -0.62
HERC1-206ENST00000559996 CTNNA3Q9UI47 895 aa11.17□□□□□ -0.62
HERC1-206ENST00000559996 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.17□□□□□ -0.62
HERC1-206ENST00000559996 COL2A1P02458 1487 aaPredicted RBP11.17□□□□□ -0.62
HERC1-206ENST00000559996 PITPNM2Q9BZ72 1349 aa11.16□□□□□ -0.62
HERC1-206ENST00000559996 MINDY4BA8MYZ0 360 aa11.16□□□□□ -0.62
HERC1-206ENST00000559996 E7EWF7 191 aa11.16□□□□□ -0.62
HERC1-206ENST00000559996 ZNF213O14771 459 aa11.16□□□□□ -0.62
HERC1-206ENST00000559996 EIF5BO60841 1220 aaKnown RBP11.16□□□□□ -0.62
HERC1-206ENST00000559996 VEGFAP15692 232 aaPredicted RBP11.16□□□□□ -0.62
HERC1-206ENST00000559996 TDO2P48775 406 aa11.16□□□□□ -0.62
HERC1-206ENST00000559996 ANAPC15P60006 121 aa11.16□□□□□ -0.62
HERC1-206ENST00000559996 RASA3Q14644 834 aa11.16□□□□□ -0.62
HERC1-206ENST00000559996 RRP1BQ14684 758 aaKnown RBP11.16□□□□□ -0.62
HERC1-206ENST00000559996 SLC4A8Q2Y0W8 1093 aa11.16□□□□□ -0.62
HERC1-206ENST00000559996 ZC3H15Q8WU90 426 aaKnown RBP11.16□□□□□ -0.62
HERC1-206ENST00000559996 STAG1Q8WVM7 1258 aa11.16□□□□□ -0.62
HERC1-206ENST00000559996 GGA3Q9NZ52 723 aa11.16□□□□□ -0.62
HERC1-206ENST00000559996 ARPP21Q9UBL0 812 aaPredicted RBP11.16□□□□□ -0.62
HERC1-206ENST00000559996 NAV1Q8NEY1 1877 aa11.16□□□□□ -0.62
HERC1-206ENST00000559996 ROBO3Q96MS0 1386 aa11.16□□□□□ -0.62
HERC1-206ENST00000559996 LAMA4Q16363 1823 aa11.15□□□□□ -0.62
HERC1-206ENST00000559996 IQCA1LA6NCM1 817 aa11.15□□□□□ -0.62
HERC1-206ENST00000559996 MYO1BO43795 1136 aa11.15□□□□□ -0.62
HERC1-206ENST00000559996 VASPP50552 380 aaPredicted RBP11.15□□□□□ -0.62
HERC1-206ENST00000559996 EXOSC10Q01780 885 aaKnown RBP11.15□□□□□ -0.62
HERC1-206ENST00000559996 IMMTQ16891 758 aaKnown RBP11.15□□□□□ -0.62
HERC1-206ENST00000559996 AKNAD1Q5T1N1 836 aa11.15□□□□□ -0.62
HERC1-206ENST00000559996 PRAMEF18Q5VWM3 479 aa11.15□□□□□ -0.62
HERC1-206ENST00000559996 C16orf86Q6ZW13 317 aa11.15□□□□□ -0.62
HERC1-206ENST00000559996 SLC44A5Q8NCS7 719 aa11.15□□□□□ -0.62
HERC1-206ENST00000559996 DEFB129Q9H1M3 183 aa11.15□□□□□ -0.62
HERC1-206ENST00000559996 DHX36Q9H2U1 1008 aaKnown RBP11.15□□□□□ -0.62
HERC1-206ENST00000559996 VEZTQ9HBM0 779 aa11.15□□□□□ -0.62
HERC1-206ENST00000559996 PCDHB8Q9UN66 801 aa11.15□□□□□ -0.62
HERC1-206ENST00000559996 NEDD4P46934 1319 aa11.14□□□□□ -0.63
HERC1-206ENST00000559996 TBC1D12O60347 775 aa11.14□□□□□ -0.63
HERC1-206ENST00000559996 POLR3DP05423 398 aaPredicted RBP11.14□□□□□ -0.63
HERC1-206ENST00000559996 CPA1P15085 419 aa11.14□□□□□ -0.63
HERC1-206ENST00000559996 SHMT1P34896 483 aa11.14□□□□□ -0.63
HERC1-206ENST00000559996 CDK8P49336 464 aa11.14□□□□□ -0.63
HERC1-206ENST00000559996 ANTXR2P58335 489 aa11.14□□□□□ -0.63
HERC1-206ENST00000559996 JAG1P78504 1218 aa11.14□□□□□ -0.63
HERC1-206ENST00000559996 NBPF12Q5TAG4 269 aaPredicted RBP11.14□□□□□ -0.63
HERC1-206ENST00000559996 TATDN1Q6P1N9 297 aa11.14□□□□□ -0.63
HERC1-206ENST00000559996 CYB5R4Q7L1T6 521 aa11.14□□□□□ -0.63
HERC1-206ENST00000559996 TTC6Q86TZ1 520 aa11.14□□□□□ -0.63
HERC1-206ENST00000559996 FOXP4Q8IVH2 680 aaPredicted RBP11.14□□□□□ -0.63
HERC1-206ENST00000559996 MB21D2Q8IYB1 491 aaPredicted RBP11.14□□□□□ -0.63
HERC1-206ENST00000559996 TM6SF1Q9BZW5 370 aa11.14□□□□□ -0.63
HERC1-206ENST00000559996 EHD4Q9H223 541 aa11.14□□□□□ -0.63
HERC1-206ENST00000559996 ZSWIM6Q9HCJ5 1215 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms