RNA–Protein interactions for RNA: ENST00000559873.5

USP3-216, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-216ENST00000559873 USP17L12C9JPN9 530 aa12.01□□□□□ -0.49
USP3-216ENST00000559873 USP17L21D6R901 530 aa12.01□□□□□ -0.49
USP3-216ENST00000559873 HSPD1P10809 573 aaKnown RBP12.01□□□□□ -0.49
USP3-216ENST00000559873 HUNKP57058 714 aa12.01□□□□□ -0.49
USP3-216ENST00000559873 FMR1Q06787 632 aaKnown RBP eCLIP12.01□□□□□ -0.49
USP3-216ENST00000559873 PRKG1Q13976 671 aa12.01□□□□□ -0.49
USP3-216ENST00000559873 DLK2Q6UY11 383 aa12.01□□□□□ -0.49
USP3-216ENST00000559873 SH3BP5LQ7L8J4 393 aa12.01□□□□□ -0.49
USP3-216ENST00000559873 CDAN1Q8IWY9 1227 aa12.01□□□□□ -0.49
USP3-216ENST00000559873 WRNIP1Q96S55 665 aa12.01□□□□□ -0.49
USP3-216ENST00000559873 ESYT1Q9BSJ8 1104 aa12.01□□□□□ -0.49
USP3-216ENST00000559873 EPB41L4AQ9HCS5 686 aaPredicted RBP12.01□□□□□ -0.49
USP3-216ENST00000559873 TLL2Q9Y6L7 1015 aa12.01□□□□□ -0.49
USP3-216ENST00000559873 ROBO3Q96MS0 1386 aa12.01□□□□□ -0.49
USP3-216ENST00000559873 MAP3K9P80192 1104 aa12□□□□□ -0.49
USP3-216ENST00000559873 ALX1Q15699 326 aa12□□□□□ -0.49
USP3-216ENST00000559873 SLC4A8Q2Y0W8 1093 aa12□□□□□ -0.49
USP3-216ENST00000559873 C12orf60Q5U649 245 aa12□□□□□ -0.49
USP3-216ENST00000559873 CST9Q5W186 159 aa12□□□□□ -0.49
USP3-216ENST00000559873 CTR9Q6PD62 1173 aa12□□□□□ -0.49
USP3-216ENST00000559873 MIGA2Q7L4E1 593 aa12□□□□□ -0.49
USP3-216ENST00000559873 SAPCD2Q86UD0 394 aa12□□□□□ -0.49
USP3-216ENST00000559873 HHIPL1Q96JK4 782 aa12□□□□□ -0.49
USP3-216ENST00000559873 MINDY4BA8MYZ0 360 aa11.99□□□□□ -0.49
USP3-216ENST00000559873 REC8O95072 547 aa11.99□□□□□ -0.49
USP3-216ENST00000559873 ECE1P42892 770 aa11.99□□□□□ -0.49
USP3-216ENST00000559873 NT5C2P49902 561 aa11.99□□□□□ -0.49
USP3-216ENST00000559873 MAP3K10Q02779 954 aa11.99□□□□□ -0.49
USP3-216ENST00000559873 PDE4BQ07343 736 aa11.99□□□□□ -0.49
USP3-216ENST00000559873 PPARAQ07869 468 aa11.99□□□□□ -0.49
USP3-216ENST00000559873 IMMTQ16891 758 aaKnown RBP11.99□□□□□ -0.49
USP3-216ENST00000559873 VPS53Q5VIR6 699 aa11.99□□□□□ -0.49
USP3-216ENST00000559873 PAXIP1Q6ZW49 1069 aaPredicted RBP11.99□□□□□ -0.49
USP3-216ENST00000559873 METTL16Q86W50 562 aaKnown RBP11.99□□□□□ -0.49
USP3-216ENST00000559873 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.99□□□□□ -0.49
USP3-216ENST00000559873 KLRG1Q96E93 195 aa11.99□□□□□ -0.49
USP3-216ENST00000559873 ANO2Q9NQ90 1003 aa11.99□□□□□ -0.49
USP3-216ENST00000559873 PICK1Q9NRD5 415 aa11.99□□□□□ -0.49
USP3-216ENST00000559873 GINM1Q9NU53 330 aa11.99□□□□□ -0.49
USP3-216ENST00000559873 U3KPZ7 1027 aaPredicted RBP11.99□□□□□ -0.49
USP3-216ENST00000559873 BAZ2AQ9UIF9 1905 aaKnown RBP11.98□□□□□ -0.49
USP3-216ENST00000559873 CTNND1O60716 968 aaKnown RBP11.98□□□□□ -0.49
USP3-216ENST00000559873 USP2O75604 605 aaPredicted RBP11.98□□□□□ -0.49
USP3-216ENST00000559873 FGAP02671 866 aa11.98□□□□□ -0.49
USP3-216ENST00000559873 PCP11498 1178 aaKnown RBP11.98□□□□□ -0.49
USP3-216ENST00000559873 PLCD1P51178 756 aa11.98□□□□□ -0.49
USP3-216ENST00000559873 NOL9Q5SY16 702 aaKnown RBP11.98□□□□□ -0.49
USP3-216ENST00000559873 RGMBQ6NW40 437 aa11.98□□□□□ -0.49
USP3-216ENST00000559873 C16orf86Q6ZW13 317 aa11.98□□□□□ -0.49
USP3-216ENST00000559873 SCYL3Q8IZE3 742 aa11.98□□□□□ -0.49
USP3-216ENST00000559873 RNF41Q9H4P4 317 aaPredicted RBP11.98□□□□□ -0.49
USP3-216ENST00000559873 MKNK2Q9HBH9 465 aa11.98□□□□□ -0.49
USP3-216ENST00000559873 ZNF112Q9UJU3 913 aa11.98□□□□□ -0.49
USP3-216ENST00000559873 SIPA1L1O43166 1804 aa11.97□□□□□ -0.49
USP3-216ENST00000559873 CYP2D7A0A087X1C5 515 aa11.97□□□□□ -0.49
USP3-216ENST00000559873 RASSF10A6NK89 507 aa11.97□□□□□ -0.49
USP3-216ENST00000559873 UBE2Q2LH0YL09 131 aa11.97□□□□□ -0.49
USP3-216ENST00000559873 ZNF213O14771 459 aa11.97□□□□□ -0.49
USP3-216ENST00000559873 ASNSP08243 561 aa11.97□□□□□ -0.49
USP3-216ENST00000559873 CYP2D6P10635 497 aa11.97□□□□□ -0.49
USP3-216ENST00000559873 ZNF157P51786 506 aaPredicted RBP11.97□□□□□ -0.49
USP3-216ENST00000559873 GABPAQ06546 454 aa11.97□□□□□ -0.49
USP3-216ENST00000559873 VGLL4Q14135 290 aa11.97□□□□□ -0.49
USP3-216ENST00000559873 LDLRAD1Q5T700 205 aa11.97□□□□□ -0.49
USP3-216ENST00000559873 RNF20Q5VTR2 975 aa11.97□□□□□ -0.49
USP3-216ENST00000559873 TATDN1Q6P1N9 297 aa11.97□□□□□ -0.49
USP3-216ENST00000559873 CCDC102AQ96A19 550 aa11.97□□□□□ -0.49
USP3-216ENST00000559873 CCDC17Q96LX7 622 aa11.97□□□□□ -0.49
USP3-216ENST00000559873 TBC1D2Q9BYX2 928 aa11.97□□□□□ -0.49
USP3-216ENST00000559873 IL25Q9H293 177 aa11.97□□□□□ -0.49
USP3-216ENST00000559873 DNAJC18Q9H819 358 aa11.97□□□□□ -0.49
USP3-216ENST00000559873 CABP5Q9NP86 173 aa11.97□□□□□ -0.49
USP3-216ENST00000559873 OTOFQ9HC10 1997 aa11.97□□□□□ -0.49
USP3-216ENST00000559873 DOCK1Q14185 1865 aa11.96□□□□□ -0.49
USP3-216ENST00000559873 LAMA4Q16363 1823 aa11.96□□□□□ -0.49
USP3-216ENST00000559873 FAM196BA6NMK8 535 aa11.96□□□□□ -0.49
USP3-216ENST00000559873 FOXP2O15409 715 aa11.96□□□□□ -0.49
USP3-216ENST00000559873 EPB41L2O43491 1005 aaKnown RBP11.96□□□□□ -0.49
USP3-216ENST00000559873 ZBTB48P10074 688 aaPredicted RBP11.96□□□□□ -0.49
USP3-216ENST00000559873 CAP2P40123 477 aa11.96□□□□□ -0.49
USP3-216ENST00000559873 CDK8P49336 464 aa11.96□□□□□ -0.49
USP3-216ENST00000559873 DEFB115Q30KQ5 88 aa11.96□□□□□ -0.49
USP3-216ENST00000559873 CERKLQ49MI3 558 aaPredicted RBP11.96□□□□□ -0.49
USP3-216ENST00000559873 MOB2Q70IA6 237 aa11.96□□□□□ -0.49
USP3-216ENST00000559873 ERO1BQ86YB8 467 aa11.96□□□□□ -0.49
USP3-216ENST00000559873 SLC10A4Q96EP9 437 aa11.96□□□□□ -0.49
USP3-216ENST00000559873 ELP3Q9H9T3 547 aa11.96□□□□□ -0.49
USP3-216ENST00000559873 AS3MTQ9HBK9 375 aa11.96□□□□□ -0.49
USP3-216ENST00000559873 ANAPC4Q9UJX5 808 aa11.96□□□□□ -0.49
USP3-216ENST00000559873 FZD1Q9UP38 647 aa11.96□□□□□ -0.49
USP3-216ENST00000559873 SPDYE5A6NIY4 337 aa11.95□□□□□ -0.5
USP3-216ENST00000559873 PHF20L1A8MW92 1017 aa11.95□□□□□ -0.5
USP3-216ENST00000559873 MPHOSPH10O00566 681 aaKnown RBP11.95□□□□□ -0.5
USP3-216ENST00000559873 SLC10A3P09131 477 aa11.95□□□□□ -0.5
USP3-216ENST00000559873 INPP5BP32019 993 aa11.95□□□□□ -0.5
USP3-216ENST00000559873 SHMT1P34896 483 aa11.95□□□□□ -0.5
USP3-216ENST00000559873 PPATQ06203 517 aa11.95□□□□□ -0.5
USP3-216ENST00000559873 NOGQ13253 232 aa11.95□□□□□ -0.5
USP3-216ENST00000559873 ABCB5Q2M3G0 1257 aa11.95□□□□□ -0.5
USP3-216ENST00000559873 PPP4R3BQ5MIZ7 849 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms