RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 TMC4Q7Z404 712 aa6.7□□□□□ -1.34
SPG11-218ENST00000559754 PLPPR2Q96GM1 343 aa6.7□□□□□ -1.34
SPG11-218ENST00000559754 VAV3Q9UKW4 847 aa6.7□□□□□ -1.34
SPG11-218ENST00000559754 CEACAM5P06731 702 aa6.69□□□□□ -1.34
SPG11-218ENST00000559754 LIG3P49916 1009 aa6.69□□□□□ -1.34
SPG11-218ENST00000559754 PRKCQQ04759 706 aa6.69□□□□□ -1.34
SPG11-218ENST00000559754 INPP5AQ14642 412 aa6.69□□□□□ -1.34
SPG11-218ENST00000559754 TAF1CQ15572 869 aaPredicted RBP6.69□□□□□ -1.34
SPG11-218ENST00000559754 PLD6Q8N2A8 252 aaKnown RBP6.69□□□□□ -1.34
SPG11-218ENST00000559754 FAM181AQ8N9Y4 354 aa6.69□□□□□ -1.34
SPG11-218ENST00000559754 GAL3ST3Q96A11 431 aa6.69□□□□□ -1.34
SPG11-218ENST00000559754 NOC4LQ9BVI4 516 aaKnown RBP6.69□□□□□ -1.34
SPG11-218ENST00000559754 WNT10AQ9GZT5 417 aa6.69□□□□□ -1.34
SPG11-218ENST00000559754 PAK6Q9NQU5 681 aaPredicted RBP6.69□□□□□ -1.34
SPG11-218ENST00000559754 TMEM265A0A087WTH1 108 aa6.68□□□□□ -1.34
SPG11-218ENST00000559754 IGF2BP3O00425 579 aaKnown RBP eCLIP6.68□□□□□ -1.34
SPG11-218ENST00000559754 OXCT1P55809 520 aa6.68□□□□□ -1.34
SPG11-218ENST00000559754 PTPN11Q06124 597 aaPredicted RBP6.68□□□□□ -1.34
SPG11-218ENST00000559754 WIPI1Q5MNZ9 446 aaPredicted RBP6.68□□□□□ -1.34
SPG11-218ENST00000559754 NFXL1Q6ZNB6 911 aa6.68□□□□□ -1.34
SPG11-218ENST00000559754 AGMOQ6ZNB7 445 aa6.68□□□□□ -1.34
SPG11-218ENST00000559754 FBXO33Q7Z6M2 555 aa6.68□□□□□ -1.34
SPG11-218ENST00000559754 HRASLS5Q96KN8 279 aa6.68□□□□□ -1.34
SPG11-218ENST00000559754 GZF1Q9H116 711 aaPredicted RBP6.68□□□□□ -1.34
SPG11-218ENST00000559754 MIR1-1HGQ9H1L0 117 aa6.68□□□□□ -1.34
SPG11-218ENST00000559754 MRS2Q9HD23 443 aa6.68□□□□□ -1.34
SPG11-218ENST00000559754 RNF19AQ9NV58 838 aa6.68□□□□□ -1.34
SPG11-218ENST00000559754 TACC3Q9Y6A5 838 aa6.68□□□□□ -1.34
SPG11-218ENST00000559754 SORBS3O60504 671 aa6.67□□□□□ -1.34
SPG11-218ENST00000559754 ETF1P62495 437 aaKnown RBP6.67□□□□□ -1.34
SPG11-218ENST00000559754 MEI1Q5TIA1 1274 aa6.67□□□□□ -1.34
SPG11-218ENST00000559754 ARMCX6Q7L4S7 300 aa6.67□□□□□ -1.34
SPG11-218ENST00000559754 HID1Q8IV36 788 aa6.67□□□□□ -1.34
SPG11-218ENST00000559754 MFSD2AQ8NA29 543 aa6.67□□□□□ -1.34
SPG11-218ENST00000559754 SNX11Q9Y5W9 270 aa6.67□□□□□ -1.34
SPG11-218ENST00000559754 CAP2P40123 477 aa6.66□□□□□ -1.34
SPG11-218ENST00000559754 SEPT6Q14141 434 aa6.66□□□□□ -1.34
SPG11-218ENST00000559754 PLCL1Q15111 1095 aa6.66□□□□□ -1.34
SPG11-218ENST00000559754 MAP3K11Q16584 847 aa6.66□□□□□ -1.34
SPG11-218ENST00000559754 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.66□□□□□ -1.34
SPG11-218ENST00000559754 CBLL1Q75N03 491 aa6.66□□□□□ -1.34
SPG11-218ENST00000559754 UBE3DQ7Z6J8 389 aa6.66□□□□□ -1.34
SPG11-218ENST00000559754 CRELD1Q96HD1 420 aa6.66□□□□□ -1.34
SPG11-218ENST00000559754 FOXQ1Q9C009 403 aa6.66□□□□□ -1.34
SPG11-218ENST00000559754 PRDM5Q9NQX1 630 aaPredicted RBP6.66□□□□□ -1.34
SPG11-218ENST00000559754 GNAT3A8MTJ3 354 aa6.65□□□□□ -1.34
SPG11-218ENST00000559754 ITIH2P19823 946 aa6.65□□□□□ -1.34
SPG11-218ENST00000559754 TXKP42681 527 aa6.65□□□□□ -1.34
SPG11-218ENST00000559754 BNIP3Q12983 259 aa6.65□□□□□ -1.34
SPG11-218ENST00000559754 AOC3Q16853 763 aa6.65□□□□□ -1.34
SPG11-218ENST00000559754 TSNAXIP1Q2TAA8 658 aa6.65□□□□□ -1.34
SPG11-218ENST00000559754 ZNF574Q6ZN55 896 aaPredicted RBP6.65□□□□□ -1.34
SPG11-218ENST00000559754 FAM214BQ7L5A3 538 aa6.65□□□□□ -1.34
SPG11-218ENST00000559754 HEXIM2Q96MH2 286 aaKnown RBP6.65□□□□□ -1.34
SPG11-218ENST00000559754 BCL11AQ9H165 835 aa6.65□□□□□ -1.34
SPG11-218ENST00000559754 TNKS2Q9H2K2 1166 aa6.65□□□□□ -1.34
SPG11-218ENST00000559754 MAPK8IP1Q9UQF2 711 aa6.65□□□□□ -1.34
SPG11-218ENST00000559754 PCDHB5Q9Y5E4 795 aa6.65□□□□□ -1.34
SPG11-218ENST00000559754 USP31Q70CQ4 1352 aa6.65□□□□□ -1.35
SPG11-218ENST00000559754 EOMESO95936 686 aa6.64□□□□□ -1.35
SPG11-218ENST00000559754 PDE4BQ07343 736 aa6.64□□□□□ -1.35
SPG11-218ENST00000559754 SLBPQ14493 270 aaKnown RBP eCLIP6.64□□□□□ -1.35
SPG11-218ENST00000559754 ZNF746Q6NUN9 644 aaPredicted RBP6.64□□□□□ -1.35
SPG11-218ENST00000559754 SPRED2Q7Z698 418 aa6.64□□□□□ -1.35
SPG11-218ENST00000559754 ASB11Q8WXH4 323 aa6.64□□□□□ -1.35
SPG11-218ENST00000559754 FMNL2Q96PY5 1086 aa6.64□□□□□ -1.35
SPG11-218ENST00000559754 VTI1BQ9UEU0 232 aa6.64□□□□□ -1.35
SPG11-218ENST00000559754 PLAGL2Q9UPG8 496 aa6.64□□□□□ -1.35
SPG11-218ENST00000559754 GFRA2O00451 464 aa6.63□□□□□ -1.35
SPG11-218ENST00000559754 CTSHP09668 335 aa6.63□□□□□ -1.35
SPG11-218ENST00000559754 CD8BP10966 210 aa6.63□□□□□ -1.35
SPG11-218ENST00000559754 JUNBP17275 347 aaPredicted RBP6.63□□□□□ -1.35
SPG11-218ENST00000559754 TFE3P19532 575 aaPredicted RBP6.63□□□□□ -1.35
SPG11-218ENST00000559754 GRK4P32298 578 aa6.63□□□□□ -1.35
SPG11-218ENST00000559754 CLCN7P51798 805 aa6.63□□□□□ -1.35
SPG11-218ENST00000559754 PWP1Q13610 501 aa6.63□□□□□ -1.35
SPG11-218ENST00000559754 CCDC84Q86UT8 332 aaPredicted RBP6.63□□□□□ -1.35
SPG11-218ENST00000559754 FAM161BQ96MY7 647 aa6.63□□□□□ -1.35
SPG11-218ENST00000559754 MIPEPQ99797 713 aa6.63□□□□□ -1.35
SPG11-218ENST00000559754 FBRSQ9HAH7 460 aa6.63□□□□□ -1.35
SPG11-218ENST00000559754 TPX2Q9ULW0 747 aaKnown RBP6.63□□□□□ -1.35
SPG11-218ENST00000559754 RNF114Q9Y508 228 aa6.63□□□□□ -1.35
SPG11-218ENST00000559754 U3KQE9 123 aa6.63□□□□□ -1.35
SPG11-218ENST00000559754 BIN1O00499 593 aa6.62□□□□□ -1.35
SPG11-218ENST00000559754 SLITRK5O94991 958 aa6.62□□□□□ -1.35
SPG11-218ENST00000559754 CST3P01034 146 aaPredicted RBP6.62□□□□□ -1.35
SPG11-218ENST00000559754 FUT4P22083 530 aa6.62□□□□□ -1.35
SPG11-218ENST00000559754 RPL6Q02878 288 aaKnown RBP6.62□□□□□ -1.35
SPG11-218ENST00000559754 ZNF792Q3KQV3 632 aa6.62□□□□□ -1.35
SPG11-218ENST00000559754 ANGEL2Q5VTE6 544 aaKnown RBP6.62□□□□□ -1.35
SPG11-218ENST00000559754 WFDC3Q8IUB2 231 aa6.62□□□□□ -1.35
SPG11-218ENST00000559754 RELL1Q8IUW5 271 aa6.62□□□□□ -1.35
SPG11-218ENST00000559754 ASIC4Q96FT7 647 aa6.62□□□□□ -1.35
SPG11-218ENST00000559754 COX4I2Q96KJ9 171 aa6.62□□□□□ -1.35
SPG11-218ENST00000559754 BPNT1O95861 308 aa6.61□□□□□ -1.35
SPG11-218ENST00000559754 PGRP06401 933 aa6.61□□□□□ -1.35
SPG11-218ENST00000559754 ITGB5P18084 799 aa6.61□□□□□ -1.35
SPG11-218ENST00000559754 CYP7A1P22680 504 aa6.61□□□□□ -1.35
SPG11-218ENST00000559754 CDK8P49336 464 aa6.61□□□□□ -1.35
SPG11-218ENST00000559754 NKG7Q16617 165 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms