RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 SCAF8Q9UPN6 1271 aaKnown RBP20.45■□□□□ 0.86
CHRNA3-206ENST00000559658 HSP90AA1P07900 732 aaKnown RBP20.45■□□□□ 0.86
CHRNA3-206ENST00000559658 DDIT3P35638 169 aa20.45■□□□□ 0.86
CHRNA3-206ENST00000559658 EIF6P56537 245 aaKnown RBP20.45■□□□□ 0.86
CHRNA3-206ENST00000559658 TNIP1Q15025 636 aa20.45■□□□□ 0.86
CHRNA3-206ENST00000559658 FAM47AQ5JRC9 791 aa20.45■□□□□ 0.86
CHRNA3-206ENST00000559658 SH3BP5LQ7L8J4 393 aa20.45■□□□□ 0.86
CHRNA3-206ENST00000559658 CCDC83Q8IWF9 413 aa20.45■□□□□ 0.86
CHRNA3-206ENST00000559658 BRPF3Q9ULD4 1205 aa20.45■□□□□ 0.86
CHRNA3-206ENST00000559658 MYH8P13535 1937 aa20.44■□□□□ 0.86
CHRNA3-206ENST00000559658 SH2B2O14492 632 aaPredicted RBP20.44■□□□□ 0.86
CHRNA3-206ENST00000559658 NMT2O60551 498 aa20.44■□□□□ 0.86
CHRNA3-206ENST00000559658 NBPF9Q3BBW0 867 aa20.44■□□□□ 0.86
CHRNA3-206ENST00000559658 OGFOD1Q8N543 542 aa20.44■□□□□ 0.86
CHRNA3-206ENST00000559658 KRT23Q9C075 422 aa20.44■□□□□ 0.86
CHRNA3-206ENST00000559658 RNF41Q9H4P4 317 aaPredicted RBP20.44■□□□□ 0.86
CHRNA3-206ENST00000559658 CNNM2Q9H8M5 875 aa20.44■□□□□ 0.86
CHRNA3-206ENST00000559658 RNF181Q9P0P0 153 aa20.44■□□□□ 0.86
CHRNA3-206ENST00000559658 RANBP6O60518 1105 aaKnown RBP20.43■□□□□ 0.86
CHRNA3-206ENST00000559658 DLGAP5Q15398 846 aa20.43■□□□□ 0.86
CHRNA3-206ENST00000559658 MICALL2Q8IY33 904 aa20.43■□□□□ 0.86
CHRNA3-206ENST00000559658 IGDCC4Q8TDY8 1250 aa20.43■□□□□ 0.86
CHRNA3-206ENST00000559658 HDAC9Q9UKV0 1011 aa20.43■□□□□ 0.86
CHRNA3-206ENST00000559658 ASTN2O75129 1339 aaPredicted RBP20.43■□□□□ 0.86
CHRNA3-206ENST00000559658 DDTLA6NHG4 134 aaPredicted RBP20.43■□□□□ 0.86
CHRNA3-206ENST00000559658 ANKRD1Q15327 319 aa20.43■□□□□ 0.86
CHRNA3-206ENST00000559658 SAMD7Q7Z3H4 446 aa20.43■□□□□ 0.86
CHRNA3-206ENST00000559658 ZBED3Q96IU2 234 aaPredicted RBP20.43■□□□□ 0.86
CHRNA3-206ENST00000559658 IDI2Q9BXS1 227 aa20.43■□□□□ 0.86
CHRNA3-206ENST00000559658 LY9Q9HBG7 655 aa20.43■□□□□ 0.86
CHRNA3-206ENST00000559658 MYOZ2Q9NPC6 264 aa20.43■□□□□ 0.86
CHRNA3-206ENST00000559658 WDR19Q8NEZ3 1342 aa20.42■□□□□ 0.86
CHRNA3-206ENST00000559658 ORC4O43929 436 aa20.42■□□□□ 0.86
CHRNA3-206ENST00000559658 RBM26Q5T8P6 1007 aaKnown RBP20.42■□□□□ 0.86
CHRNA3-206ENST00000559658 CDAN1Q8IWY9 1227 aa20.42■□□□□ 0.86
CHRNA3-206ENST00000559658 ZNF70Q9UC06 446 aaPredicted RBP20.42■□□□□ 0.86
CHRNA3-206ENST00000559658 FAM196BA6NMK8 535 aa20.41■□□□□ 0.86
CHRNA3-206ENST00000559658 TCP10L2B9ZVM9 353 aa20.41■□□□□ 0.86
CHRNA3-206ENST00000559658 WNT10BO00744 389 aa20.41■□□□□ 0.86
CHRNA3-206ENST00000559658 ZNF280AP59817 542 aaPredicted RBP20.41■□□□□ 0.86
CHRNA3-206ENST00000559658 ESR2Q92731 530 aa20.41■□□□□ 0.86
CHRNA3-206ENST00000559658 NCOA5Q9HCD5 579 aaKnown RBP20.41■□□□□ 0.86
CHRNA3-206ENST00000559658 NAP1L2Q9ULW6 460 aaPredicted RBP20.41■□□□□ 0.86
CHRNA3-206ENST00000559658 CNTNAP1P78357 1384 aa20.41■□□□□ 0.86
CHRNA3-206ENST00000559658 RXRAP19793 462 aa20.41■□□□□ 0.86
CHRNA3-206ENST00000559658 SPDYE2Q495Y8 402 aa20.41■□□□□ 0.86
CHRNA3-206ENST00000559658 TMEM67Q5HYA8 995 aa20.41■□□□□ 0.86
CHRNA3-206ENST00000559658 C9orf131Q5VYM1 1079 aa20.41■□□□□ 0.86
CHRNA3-206ENST00000559658 C16orf86Q6ZW13 317 aa20.41■□□□□ 0.86
CHRNA3-206ENST00000559658 FBXL16Q8N461 479 aa20.41■□□□□ 0.86
CHRNA3-206ENST00000559658 MYL10Q9BUA6 226 aa20.41■□□□□ 0.86
CHRNA3-206ENST00000559658 DNAJC18Q9H819 358 aa20.41■□□□□ 0.86
CHRNA3-206ENST00000559658 ANGEL1Q9UNK9 670 aaKnown RBP20.41■□□□□ 0.86
CHRNA3-206ENST00000559658 TNKSO95271 1327 aa20.4■□□□□ 0.86
CHRNA3-206ENST00000559658 KLF18A0A0U1RQI7 1052 aa20.4■□□□□ 0.86
CHRNA3-206ENST00000559658 IFIT3O14879 490 aaKnown RBP20.4■□□□□ 0.86
CHRNA3-206ENST00000559658 RASA1P20936 1047 aa20.4■□□□□ 0.86
CHRNA3-206ENST00000559658 CDK8P49336 464 aa20.4■□□□□ 0.86
CHRNA3-206ENST00000559658 GABPAQ06546 454 aa20.4■□□□□ 0.86
CHRNA3-206ENST00000559658 SCRN1Q12765 414 aa20.4■□□□□ 0.86
CHRNA3-206ENST00000559658 PKP1Q13835 747 aa20.4■□□□□ 0.86
CHRNA3-206ENST00000559658 TBC1D10BQ4KMP7 808 aaPredicted RBP20.4■□□□□ 0.86
CHRNA3-206ENST00000559658 AMOTL1Q8IY63 956 aa20.4■□□□□ 0.86
CHRNA3-206ENST00000559658 HPS5Q9UPZ3 1129 aa20.4■□□□□ 0.86
CHRNA3-206ENST00000559658 PPFIA3O75145 1194 aa20.39■□□□□ 0.86
CHRNA3-206ENST00000559658 RPS12P25398 132 aaKnown RBP20.39■□□□□ 0.86
CHRNA3-206ENST00000559658 PDIA3P30101 505 aaKnown RBP20.39■□□□□ 0.86
CHRNA3-206ENST00000559658 CCT2P78371 535 aaKnown RBP20.39■□□□□ 0.86
CHRNA3-206ENST00000559658 PDE4BQ07343 736 aa20.39■□□□□ 0.86
CHRNA3-206ENST00000559658 GPR162Q16538 588 aa20.39■□□□□ 0.86
CHRNA3-206ENST00000559658 MTMR14Q8NCE2 650 aa20.39■□□□□ 0.86
CHRNA3-206ENST00000559658 IL27Q8NEV9 243 aa20.39■□□□□ 0.86
CHRNA3-206ENST00000559658 GTF3C6Q969F1 213 aa20.39■□□□□ 0.86
CHRNA3-206ENST00000559658 ZSCAN31Q96LW9 406 aaPredicted RBP20.39■□□□□ 0.86
CHRNA3-206ENST00000559658 VEZTQ9HBM0 779 aa20.39■□□□□ 0.86
CHRNA3-206ENST00000559658 SH2B1Q9NRF2 756 aaPredicted RBP20.39■□□□□ 0.86
CHRNA3-206ENST00000559658 CNOT7Q9UIV1 285 aaKnown RBP20.39■□□□□ 0.86
CHRNA3-206ENST00000559658 DDNO94850 711 aaPredicted RBP20.39■□□□□ 0.85
CHRNA3-206ENST00000559658 SLC3A2P08195 630 aaKnown RBP20.39■□□□□ 0.85
CHRNA3-206ENST00000559658 SEC23AQ15436 765 aa20.39■□□□□ 0.85
CHRNA3-206ENST00000559658 ENAHQ8N8S7 591 aaPredicted RBP20.39■□□□□ 0.85
CHRNA3-206ENST00000559658 GOLGA8BA8MQT2 603 aa20.38■□□□□ 0.85
CHRNA3-206ENST00000559658 EVCP57679 992 aa20.38■□□□□ 0.85
CHRNA3-206ENST00000559658 SHROOM1Q2M3G4 852 aaPredicted RBP20.38■□□□□ 0.85
CHRNA3-206ENST00000559658 TMEM87BQ96K49 555 aa20.38■□□□□ 0.85
CHRNA3-206ENST00000559658 IL17RBQ9NRM6 502 aa20.38■□□□□ 0.85
CHRNA3-206ENST00000559658 PFKFB2O60825 505 aa20.37■□□□□ 0.85
CHRNA3-206ENST00000559658 PCP11498 1178 aaKnown RBP20.37■□□□□ 0.85
CHRNA3-206ENST00000559658 TFAP4Q01664 338 aa20.37■□□□□ 0.85
CHRNA3-206ENST00000559658 TRPM4Q8TD43 1214 aa20.37■□□□□ 0.85
CHRNA3-206ENST00000559658 DPF2Q92785 391 aa20.37■□□□□ 0.85
CHRNA3-206ENST00000559658 ZSCAN10Q96SZ4 725 aaPredicted RBP20.37■□□□□ 0.85
CHRNA3-206ENST00000559658 MKNK2Q9HBH9 465 aa20.37■□□□□ 0.85
CHRNA3-206ENST00000559658 TSPY2A6NKD2 308 aa20.37■□□□□ 0.85
CHRNA3-206ENST00000559658 JAK2O60674 1132 aa20.37■□□□□ 0.85
CHRNA3-206ENST00000559658 SHMT1P34896 483 aa20.37■□□□□ 0.85
CHRNA3-206ENST00000559658 ZSCAN29Q8IWY8 852 aaPredicted RBP20.37■□□□□ 0.85
CHRNA3-206ENST00000559658 CCDC144CPQ8IYA2 1237 aa20.37■□□□□ 0.85
CHRNA3-206ENST00000559658 GPC2Q8N158 579 aa20.37■□□□□ 0.85
CHRNA3-206ENST00000559658 UBAC1Q9BSL1 405 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms