RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 ZIC5Q96T25 663 aa24.36■■□□□ 1.49
TSPAN3-207ENST00000559494 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.36■■□□□ 1.49
TSPAN3-207ENST00000559494 HELLSQ9NRZ9 838 aa24.36■■□□□ 1.49
TSPAN3-207ENST00000559494 MCM9Q9NXL9 1143 aa24.36■■□□□ 1.49
TSPAN3-207ENST00000559494 PCNTO95613 3336 aa24.36■■□□□ 1.49
TSPAN3-207ENST00000559494 SIPA1L1O43166 1804 aa24.36■■□□□ 1.49
TSPAN3-207ENST00000559494 A0A0D9SFI3 127 aa24.35■■□□□ 1.49
TSPAN3-207ENST00000559494 POLR3DP05423 398 aaPredicted RBP24.35■■□□□ 1.49
TSPAN3-207ENST00000559494 PLCD1P51178 756 aa24.35■■□□□ 1.49
TSPAN3-207ENST00000559494 EVX2Q03828 476 aa24.35■■□□□ 1.49
TSPAN3-207ENST00000559494 NMIQ13287 307 aaPredicted RBP24.35■■□□□ 1.49
TSPAN3-207ENST00000559494 ELP3Q9H9T3 547 aa24.35■■□□□ 1.49
TSPAN3-207ENST00000559494 HERC5Q9UII4 1024 aaKnown RBP24.35■■□□□ 1.49
TSPAN3-207ENST00000559494 OTOFQ9HC10 1997 aa24.35■■□□□ 1.49
TSPAN3-207ENST00000559494 BAZ2AQ9UIF9 1905 aaKnown RBP24.35■■□□□ 1.49
TSPAN3-207ENST00000559494 HLA-DOAP06340 250 aa24.35■■□□□ 1.49
TSPAN3-207ENST00000559494 CYP2D6P10635 497 aa24.35■■□□□ 1.49
TSPAN3-207ENST00000559494 TTC6Q86TZ1 520 aa24.35■■□□□ 1.49
TSPAN3-207ENST00000559494 JMYQ8N9B5 988 aa24.35■■□□□ 1.49
TSPAN3-207ENST00000559494 DNAJC18Q9H819 358 aa24.35■■□□□ 1.49
TSPAN3-207ENST00000559494 CSADQ9Y600 493 aa24.35■■□□□ 1.49
TSPAN3-207ENST00000559494 SNCAIPQ9Y6H5 919 aa24.35■■□□□ 1.49
TSPAN3-207ENST00000559494 PATL2C9JE40 543 aaKnown RBP24.34■■□□□ 1.49
TSPAN3-207ENST00000559494 GNAT2P19087 354 aa24.34■■□□□ 1.49
TSPAN3-207ENST00000559494 RRP1BQ14684 758 aaKnown RBP24.34■■□□□ 1.49
TSPAN3-207ENST00000559494 MCMDC2Q4G0Z9 681 aa24.34■■□□□ 1.49
TSPAN3-207ENST00000559494 NAV1Q8NEY1 1877 aa24.33■■□□□ 1.49
TSPAN3-207ENST00000559494 USP17L12C9JPN9 530 aa24.33■■□□□ 1.48
TSPAN3-207ENST00000559494 USP17L21D6R901 530 aa24.33■■□□□ 1.48
TSPAN3-207ENST00000559494 GJA5P36382 358 aa24.33■■□□□ 1.48
TSPAN3-207ENST00000559494 MAP2K2P36507 400 aa24.33■■□□□ 1.48
TSPAN3-207ENST00000559494 NOGQ13253 232 aa24.33■■□□□ 1.48
TSPAN3-207ENST00000559494 SPRYD7Q5W111 196 aa24.33■■□□□ 1.48
TSPAN3-207ENST00000559494 CTR9Q6PD62 1173 aa24.33■■□□□ 1.48
TSPAN3-207ENST00000559494 CNKSR2Q8WXI2 1034 aa24.33■■□□□ 1.48
TSPAN3-207ENST00000559494 WNK4Q96J92 1243 aa24.33■■□□□ 1.48
TSPAN3-207ENST00000559494 CYP2D7A0A087X1C5 515 aa24.32■■□□□ 1.48
TSPAN3-207ENST00000559494 SMIM22K7EJ46 135 aa24.32■■□□□ 1.48
TSPAN3-207ENST00000559494 KIF23Q02241 960 aaPredicted RBP24.32■■□□□ 1.48
TSPAN3-207ENST00000559494 MKRN3Q13064 507 aaKnown RBP24.32■■□□□ 1.48
TSPAN3-207ENST00000559494 NOL9Q5SY16 702 aaKnown RBP24.32■■□□□ 1.48
TSPAN3-207ENST00000559494 GIMAP6Q6P9H5 292 aa24.32■■□□□ 1.48
TSPAN3-207ENST00000559494 CRACR2BQ8N4Y2 399 aaPredicted RBP24.32■■□□□ 1.48
TSPAN3-207ENST00000559494 EHD4Q9H223 541 aa24.32■■□□□ 1.48
TSPAN3-207ENST00000559494 EPB41L4AQ9HCS5 686 aaPredicted RBP24.32■■□□□ 1.48
TSPAN3-207ENST00000559494 SERPINB13Q9UIV8 391 aa24.32■■□□□ 1.48
TSPAN3-207ENST00000559494 DDX60LQ5H9U9 1706 aaKnown RBP24.31■■□□□ 1.48
TSPAN3-207ENST00000559494 HIP1O00291 1037 aa24.31■■□□□ 1.48
TSPAN3-207ENST00000559494 FOXP2O15409 715 aa24.31■■□□□ 1.48
TSPAN3-207ENST00000559494 CTNND1O60716 968 aaKnown RBP24.31■■□□□ 1.48
TSPAN3-207ENST00000559494 APPP05067 770 aa24.31■■□□□ 1.48
TSPAN3-207ENST00000559494 C12orf60Q5U649 245 aa24.31■■□□□ 1.48
TSPAN3-207ENST00000559494 CWC27Q6UX04 472 aaKnown RBP24.31■■□□□ 1.48
TSPAN3-207ENST00000559494 ZNF589Q86UQ0 364 aaPredicted RBP24.31■■□□□ 1.48
TSPAN3-207ENST00000559494 DDRGK1Q96HY6 314 aa24.31■■□□□ 1.48
TSPAN3-207ENST00000559494 DIAPH3Q9NSV4 1193 aa24.31■■□□□ 1.48
TSPAN3-207ENST00000559494 GABPAQ06546 454 aa24.3■■□□□ 1.48
TSPAN3-207ENST00000559494 VPS53Q5VIR6 699 aa24.3■■□□□ 1.48
TSPAN3-207ENST00000559494 SCYL3Q8IZE3 742 aa24.3■■□□□ 1.48
TSPAN3-207ENST00000559494 IFNL3Q8IZI9 196 aa24.3■■□□□ 1.48
TSPAN3-207ENST00000559494 OPTNQ96CV9 577 aa24.3■■□□□ 1.48
TSPAN3-207ENST00000559494 SPDYE5A6NIY4 337 aa24.29■■□□□ 1.48
TSPAN3-207ENST00000559494 CAP2P40123 477 aa24.29■■□□□ 1.48
TSPAN3-207ENST00000559494 SBK1Q52WX2 424 aa24.29■■□□□ 1.48
TSPAN3-207ENST00000559494 ERO1BQ86YB8 467 aa24.29■■□□□ 1.48
TSPAN3-207ENST00000559494 TRIM34Q9BYJ4 488 aa24.29■■□□□ 1.48
TSPAN3-207ENST00000559494 ZBTB48P10074 688 aaPredicted RBP24.28■■□□□ 1.48
TSPAN3-207ENST00000559494 CHMLP26374 656 aa24.28■■□□□ 1.48
TSPAN3-207ENST00000559494 JAG1P78504 1218 aa24.28■■□□□ 1.48
TSPAN3-207ENST00000559494 TATDN1Q6P1N9 297 aa24.28■■□□□ 1.48
TSPAN3-207ENST00000559494 DYNLL2Q96FJ2 89 aa24.28■■□□□ 1.48
TSPAN3-207ENST00000559494 SHMT1P34896 483 aa24.27■■□□□ 1.48
TSPAN3-207ENST00000559494 OTUD5Q96G74 571 aa24.27■■□□□ 1.48
TSPAN3-207ENST00000559494 CCDC171Q6TFL3 1326 aa24.26■■□□□ 1.47
TSPAN3-207ENST00000559494 PTPRAP18433 802 aa24.26■■□□□ 1.47
TSPAN3-207ENST00000559494 TDO2P48775 406 aa24.26■■□□□ 1.47
TSPAN3-207ENST00000559494 PPATQ06203 517 aa24.26■■□□□ 1.47
TSPAN3-207ENST00000559494 SHROOM1Q2M3G4 852 aaPredicted RBP24.26■■□□□ 1.47
TSPAN3-207ENST00000559494 BMP2KLQ5H9B9 411 aa24.26■■□□□ 1.47
TSPAN3-207ENST00000559494 AMOTL1Q8IY63 956 aa24.26■■□□□ 1.47
TSPAN3-207ENST00000559494 NACAP1Q9BZK3 213 aa24.26■■□□□ 1.47
TSPAN3-207ENST00000559494 IL25Q9H293 177 aa24.26■■□□□ 1.47
TSPAN3-207ENST00000559494 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.26■■□□□ 1.47
TSPAN3-207ENST00000559494 ARPP21Q9UBL0 812 aaPredicted RBP24.26■■□□□ 1.47
TSPAN3-207ENST00000559494 MINDY4BA8MYZ0 360 aa24.25■■□□□ 1.47
TSPAN3-207ENST00000559494 HSPD1P10809 573 aaKnown RBP24.25■■□□□ 1.47
TSPAN3-207ENST00000559494 ALX1Q15699 326 aa24.25■■□□□ 1.47
TSPAN3-207ENST00000559494 SLC44A5Q8NCS7 719 aa24.25■■□□□ 1.47
TSPAN3-207ENST00000559494 PICK1Q9NRD5 415 aa24.25■■□□□ 1.47
TSPAN3-207ENST00000559494 IRF6O14896 467 aa24.24■■□□□ 1.47
TSPAN3-207ENST00000559494 GDF11O95390 407 aa24.24■■□□□ 1.47
TSPAN3-207ENST00000559494 PPIL2Q13356 520 aa24.24■■□□□ 1.47
TSPAN3-207ENST00000559494 CCDC84Q86UT8 332 aaPredicted RBP24.24■■□□□ 1.47
TSPAN3-207ENST00000559494 MS4A4AQ96JQ5 239 aa24.24■■□□□ 1.47
TSPAN3-207ENST00000559494 NAPBQ9H115 298 aa24.24■■□□□ 1.47
TSPAN3-207ENST00000559494 ZHX2Q9Y6X8 837 aa24.24■■□□□ 1.47
TSPAN3-207ENST00000559494 THSD7BQ9C0I4 1608 aa24.24■■□□□ 1.47
TSPAN3-207ENST00000559494 TM4SF4P48230 202 aa24.23■■□□□ 1.47
TSPAN3-207ENST00000559494 CDK8P49336 464 aa24.23■■□□□ 1.47
TSPAN3-207ENST00000559494 MFAP1P55081 439 aaKnown RBP24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms