RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 ZC3H4Q9UPT8 1303 aaKnown RBP8.93□□□□□ -0.98
TRAF3-206ENST00000558880 COL1A1P02452 1464 aaPredicted RBP8.93□□□□□ -0.98
TRAF3-206ENST00000558880 A0A1B0GUL6 1792 aa8.92□□□□□ -0.98
TRAF3-206ENST00000558880 HSPA8P11142 646 aaKnown RBP8.92□□□□□ -0.98
TRAF3-206ENST00000558880 SCARF1Q14162 830 aa8.92□□□□□ -0.98
TRAF3-206ENST00000558880 NR6A1Q15406 480 aa8.92□□□□□ -0.98
TRAF3-206ENST00000558880 CCDC93Q567U6 631 aa8.92□□□□□ -0.98
TRAF3-206ENST00000558880 TAF7LQ5H9L4 462 aa8.92□□□□□ -0.98
TRAF3-206ENST00000558880 ANKRD45Q5TZF3 282 aa8.92□□□□□ -0.98
TRAF3-206ENST00000558880 MPNDQ8N594 471 aa8.92□□□□□ -0.98
TRAF3-206ENST00000558880 PI4K2BQ8TCG2 481 aa8.92□□□□□ -0.98
TRAF3-206ENST00000558880 LPIN2Q92539 896 aa8.92□□□□□ -0.98
TRAF3-206ENST00000558880 FOXJ1Q92949 421 aa8.92□□□□□ -0.98
TRAF3-206ENST00000558880 XAGE2Q96GT9 111 aa8.92□□□□□ -0.98
TRAF3-206ENST00000558880 CCDC136Q96JN2 1154 aa8.92□□□□□ -0.98
TRAF3-206ENST00000558880 PSMD1Q99460 953 aa8.92□□□□□ -0.98
TRAF3-206ENST00000558880 LRRCC1Q9C099 1032 aa8.92□□□□□ -0.98
TRAF3-206ENST00000558880 LNPKQ9C0E8 428 aa8.92□□□□□ -0.98
TRAF3-206ENST00000558880 TOR4AQ9NXH8 423 aa8.92□□□□□ -0.98
TRAF3-206ENST00000558880 CEP126Q9P2H0 1117 aa8.92□□□□□ -0.98
TRAF3-206ENST00000558880 NSFL1CQ9UNZ2 370 aaKnown RBP8.92□□□□□ -0.98
TRAF3-206ENST00000558880 LEMD3Q9Y2U8 911 aa8.92□□□□□ -0.98
TRAF3-206ENST00000558880 MED23Q9ULK4 1368 aa8.91□□□□□ -0.98
TRAF3-206ENST00000558880 LTBP3Q9NS15 1303 aa8.91□□□□□ -0.98
TRAF3-206ENST00000558880 YDJCA8MPS7 323 aa8.91□□□□□ -0.98
TRAF3-206ENST00000558880 UFL1O94874 794 aa8.91□□□□□ -0.98
TRAF3-206ENST00000558880 ATP2B4P23634 1241 aa8.91□□□□□ -0.98
TRAF3-206ENST00000558880 PHKA1P46020 1223 aa8.91□□□□□ -0.98
TRAF3-206ENST00000558880 GYG1P46976 350 aa8.91□□□□□ -0.98
TRAF3-206ENST00000558880 FKBP4Q02790 459 aaKnown RBP eCLIP8.91□□□□□ -0.98
TRAF3-206ENST00000558880 PUM3Q15397 648 aaKnown RBP8.91□□□□□ -0.98
TRAF3-206ENST00000558880 ATP2B3Q16720 1220 aa8.91□□□□□ -0.98
TRAF3-206ENST00000558880 PKDCCQ504Y2 493 aa8.91□□□□□ -0.98
TRAF3-206ENST00000558880 HSP90AB4PQ58FF6 505 aa8.91□□□□□ -0.98
TRAF3-206ENST00000558880 TSHZ3Q63HK5 1081 aa8.91□□□□□ -0.98
TRAF3-206ENST00000558880 CC2D2BQ6DHV5 1058 aa8.91□□□□□ -0.98
TRAF3-206ENST00000558880 ERC1Q8IUD2 1116 aa8.91□□□□□ -0.98
TRAF3-206ENST00000558880 PLEKHM2Q8IWE5 1019 aa8.91□□□□□ -0.98
TRAF3-206ENST00000558880 EPS8L1Q8TE68 723 aa8.91□□□□□ -0.98
TRAF3-206ENST00000558880 ANKRD2Q9GZV1 360 aa8.91□□□□□ -0.98
TRAF3-206ENST00000558880 KCNQ5Q9NR82 932 aa8.91□□□□□ -0.98
TRAF3-206ENST00000558880 STAP2Q9UGK3 403 aa8.91□□□□□ -0.98
TRAF3-206ENST00000558880 LCE2BO14633 110 aa8.9□□□□□ -0.98
TRAF3-206ENST00000558880 KIAA2012Q0VF49 1180 aa8.9□□□□□ -0.98
TRAF3-206ENST00000558880 GRM1Q13255 1194 aa8.9□□□□□ -0.98
TRAF3-206ENST00000558880 AGERQ15109 404 aa8.9□□□□□ -0.98
TRAF3-206ENST00000558880 CCDC102BQ68D86 513 aa8.9□□□□□ -0.98
TRAF3-206ENST00000558880 DPP8Q6V1X1 898 aaPredicted RBP8.9□□□□□ -0.98
TRAF3-206ENST00000558880 AACSQ86V21 672 aa8.9□□□□□ -0.98
TRAF3-206ENST00000558880 TDRD7Q8NHU6 1098 aaKnown RBP8.9□□□□□ -0.98
TRAF3-206ENST00000558880 OSBPL3Q9H4L5 887 aa8.9□□□□□ -0.98
TRAF3-206ENST00000558880 ZNF277Q9NRM2 450 aaPredicted RBP8.9□□□□□ -0.98
TRAF3-206ENST00000558880 GGA1Q9UJY5 639 aa8.9□□□□□ -0.98
TRAF3-206ENST00000558880 TMEM88BA6NKF7 163 aa8.89□□□□□ -0.99
TRAF3-206ENST00000558880 J3QL48 77 aa8.89□□□□□ -0.99
TRAF3-206ENST00000558880 DDNO94850 711 aaPredicted RBP8.89□□□□□ -0.99
TRAF3-206ENST00000558880 IL1R1P14778 569 aa8.89□□□□□ -0.99
TRAF3-206ENST00000558880 GSPT1P15170 499 aaKnown RBP8.89□□□□□ -0.99
TRAF3-206ENST00000558880 ARID4AP29374 1257 aaPredicted RBP8.89□□□□□ -0.99
TRAF3-206ENST00000558880 GRIK5Q16478 980 aa8.89□□□□□ -0.99
TRAF3-206ENST00000558880 AOC3Q16853 763 aa8.89□□□□□ -0.99
TRAF3-206ENST00000558880 PI16Q6UXB8 463 aa8.89□□□□□ -0.99
TRAF3-206ENST00000558880 RTKN2Q8IZC4 609 aa8.89□□□□□ -0.99
TRAF3-206ENST00000558880 SNIP1Q8TAD8 396 aaKnown RBP8.89□□□□□ -0.99
TRAF3-206ENST00000558880 ZNF512BQ96KM6 892 aaPredicted RBP8.89□□□□□ -0.99
TRAF3-206ENST00000558880 CD209Q9NNX6 404 aa8.89□□□□□ -0.99
TRAF3-206ENST00000558880 ANKIB1Q9P2G1 1089 aa8.89□□□□□ -0.99
TRAF3-206ENST00000558880 NDUFB9Q9Y6M9 179 aa8.89□□□□□ -0.99
TRAF3-206ENST00000558880 FER1L6Q2WGJ9 1857 aa8.88□□□□□ -0.99
TRAF3-206ENST00000558880 ALDH1A1P00352 501 aa8.88□□□□□ -0.99
TRAF3-206ENST00000558880 CHGBP05060 677 aa8.88□□□□□ -0.99
TRAF3-206ENST00000558880 MCAMP43121 646 aa8.88□□□□□ -0.99
TRAF3-206ENST00000558880 PDE1AP54750 535 aa8.88□□□□□ -0.99
TRAF3-206ENST00000558880 OS9Q13438 667 aaPredicted RBP8.88□□□□□ -0.99
TRAF3-206ENST00000558880 RASGRF1Q13972 1273 aa8.88□□□□□ -0.99
TRAF3-206ENST00000558880 TMEM259Q4ZIN3 620 aa8.88□□□□□ -0.99
TRAF3-206ENST00000558880 EAPPQ56P03 285 aaPredicted RBP8.88□□□□□ -0.99
TRAF3-206ENST00000558880 CLASRPQ8N2M8 674 aaKnown RBP8.88□□□□□ -0.99
TRAF3-206ENST00000558880 ZNF384Q8TF68 577 aa8.88□□□□□ -0.99
TRAF3-206ENST00000558880 EDC3Q96F86 508 aaKnown RBP8.88□□□□□ -0.99
TRAF3-206ENST00000558880 TAOK3Q9H2K8 898 aa8.88□□□□□ -0.99
TRAF3-206ENST00000558880 HMG20BQ9P0W2 317 aa8.88□□□□□ -0.99
TRAF3-206ENST00000558880 ABT1Q9ULW3 272 aaKnown RBP8.88□□□□□ -0.99
TRAF3-206ENST00000558880 AKAP2Q9Y2D5 859 aa8.88□□□□□ -0.99
TRAF3-206ENST00000558880 TLL2Q9Y6L7 1015 aa8.88□□□□□ -0.99
TRAF3-206ENST00000558880 SPEF2Q9C093 1822 aa8.88□□□□□ -0.99
TRAF3-206ENST00000558880 SLC5A1P13866 664 aa8.87□□□□□ -0.99
TRAF3-206ENST00000558880 ATP5JP18859 108 aa8.87□□□□□ -0.99
TRAF3-206ENST00000558880 HIBADHP31937 336 aaKnown RBP8.87□□□□□ -0.99
TRAF3-206ENST00000558880 IARSP41252 1262 aaKnown RBP8.87□□□□□ -0.99
TRAF3-206ENST00000558880 MAP2K1Q02750 393 aaPredicted RBP8.87□□□□□ -0.99
TRAF3-206ENST00000558880 WASHC4Q2M389 1173 aa8.87□□□□□ -0.99
TRAF3-206ENST00000558880 DEFB115Q30KQ5 88 aa8.87□□□□□ -0.99
TRAF3-206ENST00000558880 C4orf48Q5BLP8 95 aa8.87□□□□□ -0.99
TRAF3-206ENST00000558880 SOGA3Q5TF21 947 aa8.87□□□□□ -0.99
TRAF3-206ENST00000558880 TRAF7Q6Q0C0 670 aa8.87□□□□□ -0.99
TRAF3-206ENST00000558880 CERS5Q8N5B7 392 aa8.87□□□□□ -0.99
TRAF3-206ENST00000558880 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.87□□□□□ -0.99
TRAF3-206ENST00000558880 NEUROD6Q96NK8 337 aa8.87□□□□□ -0.99
TRAF3-206ENST00000558880 MXD3Q9BW11 206 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms