RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 DAGLAQ9Y4D2 1042 aa16.14■□□□□ 0.17
TPM1-215ENST00000558868 TACC3Q9Y6A5 838 aa16.14■□□□□ 0.17
TPM1-215ENST00000558868 ROBO3Q96MS0 1386 aa16.13■□□□□ 0.17
TPM1-215ENST00000558868 CYP2D7A0A087X1C5 515 aa16.13■□□□□ 0.17
TPM1-215ENST00000558868 VPS37CA5D8V6 355 aaPredicted RBP16.13■□□□□ 0.17
TPM1-215ENST00000558868 RANBP6O60518 1105 aaKnown RBP16.13■□□□□ 0.17
TPM1-215ENST00000558868 PPP2R5BQ15173 497 aa16.13■□□□□ 0.17
TPM1-215ENST00000558868 AOC3Q16853 763 aa16.13■□□□□ 0.17
TPM1-215ENST00000558868 COL13A1Q5TAT6 717 aaPredicted RBP16.13■□□□□ 0.17
TPM1-215ENST00000558868 FOXD4L5Q5VV16 416 aaPredicted RBP16.13■□□□□ 0.17
TPM1-215ENST00000558868 APOA5Q6Q788 366 aa16.13■□□□□ 0.17
TPM1-215ENST00000558868 CERS5Q8N5B7 392 aa16.13■□□□□ 0.17
TPM1-215ENST00000558868 FOXD4L4Q8WXT5 416 aaPredicted RBP16.13■□□□□ 0.17
TPM1-215ENST00000558868 HPS5Q9UPZ3 1129 aa16.13■□□□□ 0.17
TPM1-215ENST00000558868 NAV1Q8NEY1 1877 aa16.12■□□□□ 0.17
TPM1-215ENST00000558868 CCDC196A0A1B0GTZ2 297 aa16.12■□□□□ 0.17
TPM1-215ENST00000558868 H3BQV1 296 aa16.12■□□□□ 0.17
TPM1-215ENST00000558868 TRAK2O60296 914 aa16.12■□□□□ 0.17
TPM1-215ENST00000558868 JAK2O60674 1132 aa16.12■□□□□ 0.17
TPM1-215ENST00000558868 USP17L8P0C7I0 530 aa16.12■□□□□ 0.17
TPM1-215ENST00000558868 PRELPP51888 382 aa16.12■□□□□ 0.17
TPM1-215ENST00000558868 RHBDL3P58872 404 aa16.12■□□□□ 0.17
TPM1-215ENST00000558868 CSPP1Q1MSJ5 1256 aa16.12■□□□□ 0.17
TPM1-215ENST00000558868 DALRD3Q5D0E6 543 aaKnown RBP16.12■□□□□ 0.17
TPM1-215ENST00000558868 DACT2Q5SW24 774 aa16.12■□□□□ 0.17
TPM1-215ENST00000558868 MAPKAPK5Q8IW41 473 aa16.12■□□□□ 0.17
TPM1-215ENST00000558868 ZSCAN10Q96SZ4 725 aaPredicted RBP16.12■□□□□ 0.17
TPM1-215ENST00000558868 NCOA5Q9HCD5 579 aaKnown RBP16.12■□□□□ 0.17
TPM1-215ENST00000558868 CD2APQ9Y5K6 639 aa16.12■□□□□ 0.17
TPM1-215ENST00000558868 MYO3BQ8WXR4 1341 aa16.12■□□□□ 0.17
TPM1-215ENST00000558868 NID2Q14112 1375 aa16.12■□□□□ 0.17
TPM1-215ENST00000558868 GOLGA8AA7E2F4 631 aa16.11■□□□□ 0.17
TPM1-215ENST00000558868 F8W031 263 aaPredicted RBP16.11■□□□□ 0.17
TPM1-215ENST00000558868 CTDNEP1O95476 244 aa16.11■□□□□ 0.17
TPM1-215ENST00000558868 STK11IPQ8N1F8 1099 aa16.11■□□□□ 0.17
TPM1-215ENST00000558868 DDX11Q96FC9 970 aa16.11■□□□□ 0.17
TPM1-215ENST00000558868 CALM1P0DP23 149 aa16.1■□□□□ 0.17
TPM1-215ENST00000558868 CALM2P0DP24 149 aa16.1■□□□□ 0.17
TPM1-215ENST00000558868 CALM3P0DP25 149 aa16.1■□□□□ 0.17
TPM1-215ENST00000558868 CYP2D6P10635 497 aa16.1■□□□□ 0.17
TPM1-215ENST00000558868 CRKP46108 304 aa16.1■□□□□ 0.17
TPM1-215ENST00000558868 TTC6Q86TZ1 520 aa16.1■□□□□ 0.17
TPM1-215ENST00000558868 ZDHHC15Q96MV8 337 aa16.1■□□□□ 0.17
TPM1-215ENST00000558868 ZSCAN16Q9H4T2 348 aaPredicted RBP16.1■□□□□ 0.17
TPM1-215ENST00000558868 MKNK2Q9HBH9 465 aa16.1■□□□□ 0.17
TPM1-215ENST00000558868 USP40Q9NVE5 1235 aa16.1■□□□□ 0.17
TPM1-215ENST00000558868 SERPINA10Q9UK55 444 aa16.1■□□□□ 0.17
TPM1-215ENST00000558868 TNKSO95271 1327 aa16.1■□□□□ 0.17
TPM1-215ENST00000558868 FLT1P17948 1338 aa16.1■□□□□ 0.17
TPM1-215ENST00000558868 TSPY2A6NKD2 308 aa16.09■□□□□ 0.17
TPM1-215ENST00000558868 SEC23AQ15436 765 aa16.09■□□□□ 0.17
TPM1-215ENST00000558868 IFIT1BQ5T764 474 aaKnown RBP16.09■□□□□ 0.17
TPM1-215ENST00000558868 CATIPQ7Z7H3 387 aa16.09■□□□□ 0.17
TPM1-215ENST00000558868 MICU3Q86XE3 530 aa16.09■□□□□ 0.17
TPM1-215ENST00000558868 ZNF444Q8N0Y2 327 aaPredicted RBP16.09■□□□□ 0.17
TPM1-215ENST00000558868 LARGE2Q8N3Y3 721 aa16.09■□□□□ 0.17
TPM1-215ENST00000558868 NKX2-3Q8TAU0 364 aa16.09■□□□□ 0.17
TPM1-215ENST00000558868 ZKSCAN3Q9BRR0 538 aa16.09■□□□□ 0.17
TPM1-215ENST00000558868 ORC3Q9UBD5 711 aaPredicted RBP16.09■□□□□ 0.17
TPM1-215ENST00000558868 TAOK2Q9UL54 1235 aa16.09■□□□□ 0.17
TPM1-215ENST00000558868 PRDM1O75626 825 aa16.08■□□□□ 0.16
TPM1-215ENST00000558868 DDAH1O94760 285 aa16.08■□□□□ 0.16
TPM1-215ENST00000558868 NCLP19338 710 aaKnown RBP16.08■□□□□ 0.16
TPM1-215ENST00000558868 SCNN1DP51172 638 aa16.08■□□□□ 0.16
TPM1-215ENST00000558868 RTN1Q16799 776 aa16.08■□□□□ 0.16
TPM1-215ENST00000558868 C16orf86Q6ZW13 317 aa16.08■□□□□ 0.16
TPM1-215ENST00000558868 ZNF654Q8IZM8 581 aa16.08■□□□□ 0.16
TPM1-215ENST00000558868 WASF1Q92558 559 aa16.08■□□□□ 0.16
TPM1-215ENST00000558868 MXD3Q9BW11 206 aa16.08■□□□□ 0.16
TPM1-215ENST00000558868 TCP11L1Q9NUJ3 509 aa16.08■□□□□ 0.16
TPM1-215ENST00000558868 SAP30BPQ9UHR5 308 aaKnown RBP16.08■□□□□ 0.16
TPM1-215ENST00000558868 HSPA6P17066 643 aa16.07■□□□□ 0.16
TPM1-215ENST00000558868 CDC37L1Q7L3B6 337 aa16.07■□□□□ 0.16
TPM1-215ENST00000558868 KIAA0825Q8IV33 1275 aa16.07■□□□□ 0.16
TPM1-215ENST00000558868 NIM1KQ8IY84 436 aa16.07■□□□□ 0.16
TPM1-215ENST00000558868 ENAHQ8N8S7 591 aaPredicted RBP16.07■□□□□ 0.16
TPM1-215ENST00000558868 SENP2Q9HC62 589 aa16.07■□□□□ 0.16
TPM1-215ENST00000558868 KCNQ5Q9NR82 932 aa16.07■□□□□ 0.16
TPM1-215ENST00000558868 LMBRD1Q9NUN5 540 aa16.07■□□□□ 0.16
TPM1-215ENST00000558868 RBM28Q9NW13 759 aaKnown RBP16.07■□□□□ 0.16
TPM1-215ENST00000558868 STK36Q9NRP7 1315 aa16.07■□□□□ 0.16
TPM1-215ENST00000558868 FOCADQ5VW36 1801 aa16.07■□□□□ 0.16
TPM1-215ENST00000558868 CDK5RAP2Q96SN8 1893 aa16.07■□□□□ 0.16
TPM1-215ENST00000558868 DDX60LQ5H9U9 1706 aaKnown RBP16.06■□□□□ 0.16
TPM1-215ENST00000558868 PRPF40AO75400 957 aaKnown RBP16.06■□□□□ 0.16
TPM1-215ENST00000558868 NPM3O75607 178 aaKnown RBP16.06■□□□□ 0.16
TPM1-215ENST00000558868 MBD3O95983 291 aa16.06■□□□□ 0.16
TPM1-215ENST00000558868 HLA-DOAP06340 250 aa16.06■□□□□ 0.16
TPM1-215ENST00000558868 IFNAR1P17181 557 aa16.06■□□□□ 0.16
TPM1-215ENST00000558868 IARSP41252 1262 aaKnown RBP16.06■□□□□ 0.16
TPM1-215ENST00000558868 RBM5P52756 815 aaKnown RBP eCLIP16.06■□□□□ 0.16
TPM1-215ENST00000558868 TFAP4Q01664 338 aa16.06■□□□□ 0.16
TPM1-215ENST00000558868 SSRP1Q08945 709 aaKnown RBP16.06■□□□□ 0.16
TPM1-215ENST00000558868 KLHL40Q2TBA0 621 aa16.06■□□□□ 0.16
TPM1-215ENST00000558868 APOBEC3HQ6NTF7 200 aaKnown RBP16.06■□□□□ 0.16
TPM1-215ENST00000558868 CDC42EP5Q6NZY7 148 aa16.06■□□□□ 0.16
TPM1-215ENST00000558868 RSBN1LQ6PCB5 846 aaPredicted RBP16.06■□□□□ 0.16
TPM1-215ENST00000558868 DGKHQ86XP1 1220 aa16.06■□□□□ 0.16
TPM1-215ENST00000558868 TRIM22Q8IYM9 498 aa16.06■□□□□ 0.16
TPM1-215ENST00000558868 FANCBQ8NB91 859 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms