RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 LILRB5O75023 590 aa5.94□□□□□ -1.46
SPG11-211ENST00000558561 HSPA5P11021 654 aaKnown RBP5.94□□□□□ -1.46
SPG11-211ENST00000558561 RBM6P78332 1123 aaKnown RBP5.94□□□□□ -1.46
SPG11-211ENST00000558561 GDF6Q6KF10 455 aaPredicted RBP5.94□□□□□ -1.46
SPG11-211ENST00000558561 UNC5CLQ8IV45 518 aa5.94□□□□□ -1.46
SPG11-211ENST00000558561 TTC9Q92623 222 aa5.94□□□□□ -1.46
SPG11-211ENST00000558561 RNF19AQ9NV58 838 aa5.94□□□□□ -1.46
SPG11-211ENST00000558561 CD163L1Q9NR16 1453 aa5.94□□□□□ -1.46
SPG11-211ENST00000558561 MARF1Q9Y4F3 1742 aaKnown RBP5.94□□□□□ -1.46
SPG11-211ENST00000558561 PDE2AO00408 941 aaPredicted RBP5.93□□□□□ -1.46
SPG11-211ENST00000558561 GCP02774 474 aa5.93□□□□□ -1.46
SPG11-211ENST00000558561 LDHBP07195 334 aaKnown RBP5.93□□□□□ -1.46
SPG11-211ENST00000558561 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.93□□□□□ -1.46
SPG11-211ENST00000558561 EAPPQ56P03 285 aaPredicted RBP5.93□□□□□ -1.46
SPG11-211ENST00000558561 NXPE3Q969Y0 559 aa5.93□□□□□ -1.46
SPG11-211ENST00000558561 LACRTQ9GZZ8 138 aa5.93□□□□□ -1.46
SPG11-211ENST00000558561 PRDM6Q9NQX0 595 aa5.93□□□□□ -1.46
SPG11-211ENST00000558561 TRPC5Q9UL62 973 aaPredicted RBP5.93□□□□□ -1.46
SPG11-211ENST00000558561 RALGAPBQ86X10 1494 aa5.93□□□□□ -1.46
SPG11-211ENST00000558561 KIF1AQ12756 1690 aa5.93□□□□□ -1.46
SPG11-211ENST00000558561 TOPAZ1Q8N9V7 1692 aa5.93□□□□□ -1.46
SPG11-211ENST00000558561 RGPD5Q99666 1765 aa5.93□□□□□ -1.46
SPG11-211ENST00000558561 KIAA0232Q92628 1395 aa5.93□□□□□ -1.46
SPG11-211ENST00000558561 ATRNO75882 1429 aa5.92□□□□□ -1.46
SPG11-211ENST00000558561 CRYBG1Q9Y4K1 1723 aa5.92□□□□□ -1.46
SPG11-211ENST00000558561 METTL12A8MUP2 240 aa5.92□□□□□ -1.46
SPG11-211ENST00000558561 GADD45BO75293 160 aaPredicted RBP5.92□□□□□ -1.46
SPG11-211ENST00000558561 SMNDC1O75940 238 aaKnown RBP eCLIP5.92□□□□□ -1.46
SPG11-211ENST00000558561 NID1P14543 1247 aa5.92□□□□□ -1.46
SPG11-211ENST00000558561 ERCC3P19447 782 aa5.92□□□□□ -1.46
SPG11-211ENST00000558561 BAG6P46379 1132 aa5.92□□□□□ -1.46
SPG11-211ENST00000558561 COL19A1Q14993 1142 aa5.92□□□□□ -1.46
SPG11-211ENST00000558561 KIAA0319Q5VV43 1072 aa5.92□□□□□ -1.46
SPG11-211ENST00000558561 FBXO33Q7Z6M2 555 aa5.92□□□□□ -1.46
SPG11-211ENST00000558561 IL22RA1Q8N6P7 574 aa5.92□□□□□ -1.46
SPG11-211ENST00000558561 BEND7Q8N7W2 519 aaPredicted RBP5.92□□□□□ -1.46
SPG11-211ENST00000558561 TRIM11Q96F44 468 aa5.92□□□□□ -1.46
SPG11-211ENST00000558561 POLR3GLQ9BT43 218 aa5.92□□□□□ -1.46
SPG11-211ENST00000558561 EHD4Q9H223 541 aa5.92□□□□□ -1.46
SPG11-211ENST00000558561 SH2B1Q9NRF2 756 aaPredicted RBP5.92□□□□□ -1.46
SPG11-211ENST00000558561 USP35Q9P2H5 1018 aa5.92□□□□□ -1.46
SPG11-211ENST00000558561 CCDC9Q9Y3X0 531 aaKnown RBP5.92□□□□□ -1.46
SPG11-211ENST00000558561 SLIT2O94813 1529 aa5.92□□□□□ -1.46
SPG11-211ENST00000558561 GLI3P10071 1580 aa5.92□□□□□ -1.46
SPG11-211ENST00000558561 BRWD3Q6RI45 1802 aa5.92□□□□□ -1.46
SPG11-211ENST00000558561 CAMTA1Q9Y6Y1 1673 aa5.91□□□□□ -1.46
SPG11-211ENST00000558561 RGS12O14924 1447 aa5.91□□□□□ -1.46
SPG11-211ENST00000558561 CPSF1Q10570 1443 aaKnown RBP5.91□□□□□ -1.46
SPG11-211ENST00000558561 ABCA3Q99758 1704 aa5.91□□□□□ -1.46
SPG11-211ENST00000558561 CDC25BP30305 580 aa5.91□□□□□ -1.46
SPG11-211ENST00000558561 VPS72Q15906 364 aa5.91□□□□□ -1.46
SPG11-211ENST00000558561 SPRED3Q2MJR0 410 aa5.91□□□□□ -1.46
SPG11-211ENST00000558561 ALG1LQ6GMV1 187 aa5.91□□□□□ -1.46
SPG11-211ENST00000558561 DMRTC2Q8IXT2 367 aaPredicted RBP5.91□□□□□ -1.46
SPG11-211ENST00000558561 TMEM102Q8N9M5 508 aaPredicted RBP5.91□□□□□ -1.46
SPG11-211ENST00000558561 TCF12Q99081 682 aa5.91□□□□□ -1.46
SPG11-211ENST00000558561 PLVAPQ9BX97 442 aa5.91□□□□□ -1.46
SPG11-211ENST00000558561 SUV39H2Q9H5I1 410 aa5.91□□□□□ -1.46
SPG11-211ENST00000558561 LIN7BQ9HAP6 207 aa5.91□□□□□ -1.46
SPG11-211ENST00000558561 PRDM11Q9NQV5 511 aa5.91□□□□□ -1.46
SPG11-211ENST00000558561 NLRP2Q9NX02 1062 aa5.91□□□□□ -1.46
SPG11-211ENST00000558561 MKL2Q9ULH7 1088 aa5.91□□□□□ -1.46
SPG11-211ENST00000558561 KTN1Q86UP2 1357 aaKnown RBP5.91□□□□□ -1.46
SPG11-211ENST00000558561 USP47Q96K76 1375 aa5.91□□□□□ -1.46
SPG11-211ENST00000558561 SBNO2Q9Y2G9 1366 aa5.91□□□□□ -1.46
SPG11-211ENST00000558561 USP6P35125 1406 aa5.91□□□□□ -1.46
SPG11-211ENST00000558561 AKAP12Q02952 1782 aa5.9□□□□□ -1.46
SPG11-211ENST00000558561 FAM181BA6NEQ2 426 aa5.9□□□□□ -1.46
SPG11-211ENST00000558561 GNB5O14775 395 aa5.9□□□□□ -1.46
SPG11-211ENST00000558561 FYB1O15117 783 aa5.9□□□□□ -1.46
SPG11-211ENST00000558561 GRIA4P48058 902 aa5.9□□□□□ -1.46
SPG11-211ENST00000558561 ATP2B2Q01814 1243 aa5.9□□□□□ -1.46
SPG11-211ENST00000558561 GRM2Q14416 872 aa5.9□□□□□ -1.46
SPG11-211ENST00000558561 TRAPPC3LQ5T215 181 aa5.9□□□□□ -1.46
SPG11-211ENST00000558561 MSL1Q68DK7 614 aa5.9□□□□□ -1.46
SPG11-211ENST00000558561 PTF1AQ7RTS3 328 aa5.9□□□□□ -1.46
SPG11-211ENST00000558561 PODNQ7Z5L7 613 aa5.9□□□□□ -1.46
SPG11-211ENST00000558561 ARHGEF25Q86VW2 580 aa5.9□□□□□ -1.46
SPG11-211ENST00000558561 WFDC8Q8IUA0 241 aa5.9□□□□□ -1.46
SPG11-211ENST00000558561 CCNJLQ8IV13 435 aa5.9□□□□□ -1.46
SPG11-211ENST00000558561 RGS22Q8NE09 1264 aa5.9□□□□□ -1.46
SPG11-211ENST00000558561 ASAP3Q8TDY4 903 aa5.9□□□□□ -1.46
SPG11-211ENST00000558561 DUSP9Q99956 384 aaKnown RBP5.9□□□□□ -1.46
SPG11-211ENST00000558561 BCL2L13Q9BXK5 485 aa5.9□□□□□ -1.46
SPG11-211ENST00000558561 ITSN1Q15811 1721 aa5.9□□□□□ -1.47
SPG11-211ENST00000558561 ARHGEF10O15013 1369 aa5.9□□□□□ -1.47
SPG11-211ENST00000558561 COL18A1P39060 1754 aa5.9□□□□□ -1.47
SPG11-211ENST00000558561 PIK3C2AO00443 1686 aa5.89□□□□□ -1.47
SPG11-211ENST00000558561 PLCH1Q4KWH8 1693 aa5.89□□□□□ -1.47
SPG11-211ENST00000558561 PRPF40AO75400 957 aaKnown RBP5.89□□□□□ -1.47
SPG11-211ENST00000558561 PTPRAP18433 802 aa5.89□□□□□ -1.47
SPG11-211ENST00000558561 CDC27P30260 824 aa5.89□□□□□ -1.47
SPG11-211ENST00000558561 EVA1CP58658 441 aa5.89□□□□□ -1.47
SPG11-211ENST00000558561 NXPE4Q6UWF7 544 aa5.89□□□□□ -1.47
SPG11-211ENST00000558561 DEFB132Q7Z7B7 95 aa5.89□□□□□ -1.47
SPG11-211ENST00000558561 FBF1Q8TES7 1133 aa5.89□□□□□ -1.47
SPG11-211ENST00000558561 GIPC2Q8TF65 315 aa5.89□□□□□ -1.47
SPG11-211ENST00000558561 FOXD4L4Q8WXT5 416 aaPredicted RBP5.89□□□□□ -1.47
SPG11-211ENST00000558561 SCARF2Q96GP6 870 aaPredicted RBP5.89□□□□□ -1.47
SPG11-211ENST00000558561 BCO2Q9BYV7 579 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms