RNA–Protein interactions for RNA: ENST00000558321.5

CDC42BPB-202, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-202ENST00000558321 DNAJC2Q99543 621 aaKnown RBP15.05■□□□□ -0
CDC42BPB-202ENST00000558321 SAP30BPQ9UHR5 308 aaKnown RBP15.05■□□□□ -0
CDC42BPB-202ENST00000558321 HERC5Q9UII4 1024 aaKnown RBP15.05■□□□□ -0
CDC42BPB-202ENST00000558321 PTPN22Q9Y2R2 807 aa15.05■□□□□ -0
CDC42BPB-202ENST00000558321 AFG3L2Q9Y4W6 797 aa15.05■□□□□ -0
CDC42BPB-202ENST00000558321 ECM2O94769 699 aaPredicted RBP15.04■□□□□ -0
CDC42BPB-202ENST00000558321 CERS3Q8IU89 383 aa15.04■□□□□ -0
CDC42BPB-202ENST00000558321 FOXP4Q8IVH2 680 aaPredicted RBP15.04■□□□□ -0
CDC42BPB-202ENST00000558321 CPA4Q9UI42 421 aa15.04■□□□□ -0
CDC42BPB-202ENST00000558321 PALD1Q9ULE6 856 aa15.04■□□□□ -0
CDC42BPB-202ENST00000558321 LAMB1P07942 1786 aa15.03■□□□□ -0
CDC42BPB-202ENST00000558321 FLT1P17948 1338 aa15.03■□□□□ -0
CDC42BPB-202ENST00000558321 A0A0G2JLL6 359 aaPredicted RBP15.03■□□□□ -0
CDC42BPB-202ENST00000558321 GOLIM4O00461 696 aa15.03■□□□□ -0
CDC42BPB-202ENST00000558321 HLA-DOAP06340 250 aa15.03■□□□□ -0
CDC42BPB-202ENST00000558321 CAP2P40123 477 aa15.03■□□□□ -0
CDC42BPB-202ENST00000558321 MOGSQ13724 837 aa15.03■□□□□ -0
CDC42BPB-202ENST00000558321 GPAT2Q6NUI2 795 aa15.03■□□□□ -0
CDC42BPB-202ENST00000558321 TMED8Q6PL24 325 aaPredicted RBP15.03■□□□□ -0
CDC42BPB-202ENST00000558321 PRRT2Q7Z6L0 340 aaPredicted RBP15.03■□□□□ -0
CDC42BPB-202ENST00000558321 CCDC84Q86UT8 332 aaPredicted RBP15.03■□□□□ -0
CDC42BPB-202ENST00000558321 PARK7Q99497 189 aaKnown RBP15.03■□□□□ -0
CDC42BPB-202ENST00000558321 LRRCC1Q9C099 1032 aa15.03■□□□□ -0
CDC42BPB-202ENST00000558321 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.03■□□□□ -0
CDC42BPB-202ENST00000558321 DOCK2Q92608 1830 aa15.03■□□□□ -0
CDC42BPB-202ENST00000558321 COL2A1P02458 1487 aaPredicted RBP15.02■□□□□ -0
CDC42BPB-202ENST00000558321 LACTBP83111 547 aaPredicted RBP15.02■□□□□ -0
CDC42BPB-202ENST00000558321 SPP2Q13103 211 aa15.02■□□□□ -0
CDC42BPB-202ENST00000558321 SLC4A8Q2Y0W8 1093 aa15.02■□□□□ -0
CDC42BPB-202ENST00000558321 SLC9C2Q5TAH2 1124 aa15.02■□□□□ -0
CDC42BPB-202ENST00000558321 C17orf99Q6UX52 265 aa15.02■□□□□ -0
CDC42BPB-202ENST00000558321 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.02■□□□□ -0
CDC42BPB-202ENST00000558321 YTHDC1Q96MU7 727 aaKnown RBP15.02■□□□□ -0
CDC42BPB-202ENST00000558321 BOLA2Q9H3K6 86 aa15.02■□□□□ -0
CDC42BPB-202ENST00000558321 MAGEB6P1A0A0J9YX57 407 aa15.01□□□□□ -0.01
CDC42BPB-202ENST00000558321 USP17L5A8MUK1 530 aa15.01□□□□□ -0.01
CDC42BPB-202ENST00000558321 CYP2C8P10632 490 aa15.01□□□□□ -0.01
CDC42BPB-202ENST00000558321 CAP1Q01518 475 aa15.01□□□□□ -0.01
CDC42BPB-202ENST00000558321 ZNF280CQ8ND82 737 aa15.01□□□□□ -0.01
CDC42BPB-202ENST00000558321 TBC1D2Q9BYX2 928 aa15.01□□□□□ -0.01
CDC42BPB-202ENST00000558321 SMARCA5O60264 1052 aaPredicted RBP15□□□□□ -0.01
CDC42BPB-202ENST00000558321 FMNL1O95466 1100 aaPredicted RBP15□□□□□ -0.01
CDC42BPB-202ENST00000558321 PDE6AP16499 860 aa15□□□□□ -0.01
CDC42BPB-202ENST00000558321 ATP5JP18859 108 aa15□□□□□ -0.01
CDC42BPB-202ENST00000558321 PSMC4P43686 418 aa15□□□□□ -0.01
CDC42BPB-202ENST00000558321 RRP1BQ14684 758 aaKnown RBP15□□□□□ -0.01
CDC42BPB-202ENST00000558321 NBPF11Q86T75 865 aa15□□□□□ -0.01
CDC42BPB-202ENST00000558321 ARHGAP39Q9C0H5 1083 aa15□□□□□ -0.01
CDC42BPB-202ENST00000558321 AS3MTQ9HBK9 375 aa15□□□□□ -0.01
CDC42BPB-202ENST00000558321 PAG1Q9NWQ8 432 aa15□□□□□ -0.01
CDC42BPB-202ENST00000558321 GNRH1P01148 92 aa14.99□□□□□ -0.01
CDC42BPB-202ENST00000558321 ASNSP08243 561 aa14.99□□□□□ -0.01
CDC42BPB-202ENST00000558321 HOXD10P28358 340 aa14.99□□□□□ -0.01
CDC42BPB-202ENST00000558321 SLC9C1Q4G0N8 1177 aa14.99□□□□□ -0.01
CDC42BPB-202ENST00000558321 TTC6Q86TZ1 520 aa14.99□□□□□ -0.01
CDC42BPB-202ENST00000558321 SMCR8Q8TEV9 937 aaPredicted RBP14.99□□□□□ -0.01
CDC42BPB-202ENST00000558321 EDC3Q96F86 508 aaKnown RBP14.99□□□□□ -0.01
CDC42BPB-202ENST00000558321 CRNKL1Q9BZJ0 848 aaKnown RBP14.99□□□□□ -0.01
CDC42BPB-202ENST00000558321 AGTPBP1Q9UPW5 1226 aa14.99□□□□□ -0.01
CDC42BPB-202ENST00000558321 SLC45A1Q9Y2W3 748 aa14.99□□□□□ -0.01
CDC42BPB-202ENST00000558321 PTCH2Q9Y6C5 1203 aa14.99□□□□□ -0.01
CDC42BPB-202ENST00000558321 MAST2Q6P0Q8 1798 aa14.98□□□□□ -0.01
CDC42BPB-202ENST00000558321 ZNF532Q9HCE3 1301 aa14.98□□□□□ -0.01
CDC42BPB-202ENST00000558321 POLR3DP05423 398 aaPredicted RBP14.98□□□□□ -0.01
CDC42BPB-202ENST00000558321 HMGCS2P54868 508 aa14.98□□□□□ -0.01
CDC42BPB-202ENST00000558321 METTL16Q86W50 562 aaKnown RBP14.98□□□□□ -0.01
CDC42BPB-202ENST00000558321 PROCA1Q8NCQ7 364 aaPredicted RBP14.98□□□□□ -0.01
CDC42BPB-202ENST00000558321 HAUS7Q99871 368 aa14.98□□□□□ -0.01
CDC42BPB-202ENST00000558321 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.98□□□□□ -0.01
CDC42BPB-202ENST00000558321 PNMA3Q9UL41 463 aa14.98□□□□□ -0.01
CDC42BPB-202ENST00000558321 GDF11O95390 407 aa14.97□□□□□ -0.01
CDC42BPB-202ENST00000558321 PRMT2P55345 433 aa14.97□□□□□ -0.01
CDC42BPB-202ENST00000558321 PABPC4Q13310 644 aaKnown RBP eCLIP14.97□□□□□ -0.01
CDC42BPB-202ENST00000558321 TREML2Q5T2D2 321 aa14.97□□□□□ -0.01
CDC42BPB-202ENST00000558321 TRIM47Q96LD4 638 aa14.97□□□□□ -0.01
CDC42BPB-202ENST00000558321 RIOK1Q9BRS2 568 aaKnown RBP14.97□□□□□ -0.01
CDC42BPB-202ENST00000558321 TMEM106CQ9BVX2 250 aa14.97□□□□□ -0.01
CDC42BPB-202ENST00000558321 DCTPP1Q9H773 170 aa14.97□□□□□ -0.01
CDC42BPB-202ENST00000558321 DNAJC18Q9H819 358 aa14.97□□□□□ -0.01
CDC42BPB-202ENST00000558321 GINM1Q9NU53 330 aa14.97□□□□□ -0.01
CDC42BPB-202ENST00000558321 TMOD4Q9NZQ9 345 aa14.97□□□□□ -0.01
CDC42BPB-202ENST00000558321 SERPINB13Q9UIV8 391 aa14.97□□□□□ -0.01
CDC42BPB-202ENST00000558321 ADGRA2Q96PE1 1338 aa14.96□□□□□ -0.01
CDC42BPB-202ENST00000558321 BCRP11274 1271 aa14.96□□□□□ -0.01
CDC42BPB-202ENST00000558321 OSBPP22059 807 aa14.96□□□□□ -0.01
CDC42BPB-202ENST00000558321 FCGRTP55899 365 aa14.96□□□□□ -0.01
CDC42BPB-202ENST00000558321 RRP1P56182 461 aaKnown RBP14.96□□□□□ -0.01
CDC42BPB-202ENST00000558321 DOCK1Q14185 1865 aa14.96□□□□□ -0.01
CDC42BPB-202ENST00000558321 RAET1EQ8TD07 263 aa14.96□□□□□ -0.01
CDC42BPB-202ENST00000558321 ARMC5Q96C12 935 aa14.96□□□□□ -0.01
CDC42BPB-202ENST00000558321 GPATCH3Q96I76 525 aa14.96□□□□□ -0.01
CDC42BPB-202ENST00000558321 WDR18Q9BV38 432 aa14.96□□□□□ -0.01
CDC42BPB-202ENST00000558321 MCM9Q9NXL9 1143 aa14.96□□□□□ -0.01
CDC42BPB-202ENST00000558321 MYO5AQ9Y4I1 1855 aaKnown RBP14.96□□□□□ -0.01
CDC42BPB-202ENST00000558321 TCRBV5S4A2TA0A5A2 114 aa14.95□□□□□ -0.02
CDC42BPB-202ENST00000558321 MYCP01106 439 aaPredicted RBP14.95□□□□□ -0.02
CDC42BPB-202ENST00000558321 GH2P01242 217 aa14.95□□□□□ -0.02
CDC42BPB-202ENST00000558321 BACE1P56817 501 aa14.95□□□□□ -0.02
CDC42BPB-202ENST00000558321 JAG1P78504 1218 aa14.95□□□□□ -0.02
CDC42BPB-202ENST00000558321 MTMR2Q13614 643 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms