RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 ZSCAN29Q8IWY8 852 aaPredicted RBP19.93■□□□□ 0.78
SNX1-203ENST00000558040 FAM151AQ8WW52 585 aa19.93■□□□□ 0.78
SNX1-203ENST00000558040 ESR2Q92731 530 aa19.93■□□□□ 0.78
SNX1-203ENST00000558040 WDR19Q8NEZ3 1342 aa19.93■□□□□ 0.78
SNX1-203ENST00000558040 B4E1Z4 1266 aa19.92■□□□□ 0.78
SNX1-203ENST00000558040 ORC4O43929 436 aa19.92■□□□□ 0.78
SNX1-203ENST00000558040 EGFRP00533 1210 aa19.92■□□□□ 0.78
SNX1-203ENST00000558040 CPA1P15085 419 aa19.92■□□□□ 0.78
SNX1-203ENST00000558040 ANKRD1Q15327 319 aa19.92■□□□□ 0.78
SNX1-203ENST00000558040 RRP12Q5JTH9 1297 aaKnown RBP19.92■□□□□ 0.78
SNX1-203ENST00000558040 MB21D2Q8IYB1 491 aaPredicted RBP19.92■□□□□ 0.78
SNX1-203ENST00000558040 STK11IPQ8N1F8 1099 aa19.92■□□□□ 0.78
SNX1-203ENST00000558040 TTC14Q96N46 770 aa19.92■□□□□ 0.78
SNX1-203ENST00000558040 EHD4Q9H223 541 aa19.92■□□□□ 0.78
SNX1-203ENST00000558040 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.92■□□□□ 0.78
SNX1-203ENST00000558040 ATRNL1Q5VV63 1379 aa19.92■□□□□ 0.78
SNX1-203ENST00000558040 FGD1P98174 961 aa19.91■□□□□ 0.78
SNX1-203ENST00000558040 C16orf86Q6ZW13 317 aa19.91■□□□□ 0.78
SNX1-203ENST00000558040 APOBEC3FQ8IUX4 373 aaKnown RBP19.91■□□□□ 0.78
SNX1-203ENST00000558040 ALDH8A1Q9H2A2 487 aaPredicted RBP19.91■□□□□ 0.78
SNX1-203ENST00000558040 MKNK2Q9HBH9 465 aa19.91■□□□□ 0.78
SNX1-203ENST00000558040 PI4KBQ9UBF8 816 aa19.91■□□□□ 0.78
SNX1-203ENST00000558040 SWAP70Q9UH65 585 aa19.91■□□□□ 0.78
SNX1-203ENST00000558040 SERPINB13Q9UIV8 391 aa19.91■□□□□ 0.78
SNX1-203ENST00000558040 HACL1Q9UJ83 578 aa19.91■□□□□ 0.78
SNX1-203ENST00000558040 IQCA1LA6NCM1 817 aa19.9■□□□□ 0.78
SNX1-203ENST00000558040 PRC1O43663 620 aa19.9■□□□□ 0.78
SNX1-203ENST00000558040 KDM4AO75164 1064 aa19.9■□□□□ 0.78
SNX1-203ENST00000558040 EXOSC10Q01780 885 aaKnown RBP19.9■□□□□ 0.78
SNX1-203ENST00000558040 ZFPM1Q8IX07 1006 aa19.9■□□□□ 0.78
SNX1-203ENST00000558040 CRACR2BQ8N4Y2 399 aaPredicted RBP19.9■□□□□ 0.78
SNX1-203ENST00000558040 TRPM4Q8TD43 1214 aa19.9■□□□□ 0.78
SNX1-203ENST00000558040 DYNLL2Q96FJ2 89 aa19.9■□□□□ 0.78
SNX1-203ENST00000558040 TRIM34Q9BYJ4 488 aa19.9■□□□□ 0.78
SNX1-203ENST00000558040 DAXXQ9UER7 740 aaPredicted RBP19.9■□□□□ 0.78
SNX1-203ENST00000558040 SMIM22K7EJ46 135 aa19.89■□□□□ 0.77
SNX1-203ENST00000558040 AK2P54819 239 aa19.89■□□□□ 0.77
SNX1-203ENST00000558040 CNTNAP1P78357 1384 aa19.89■□□□□ 0.77
SNX1-203ENST00000558040 EVX2Q03828 476 aa19.89■□□□□ 0.77
SNX1-203ENST00000558040 SART3Q15020 963 aaKnown RBP19.89■□□□□ 0.77
SNX1-203ENST00000558040 FOXP4Q8IVH2 680 aaPredicted RBP19.89■□□□□ 0.77
SNX1-203ENST00000558040 TMEM87BQ96K49 555 aa19.89■□□□□ 0.77
SNX1-203ENST00000558040 MTA3Q9BTC8 594 aa19.89■□□□□ 0.77
SNX1-203ENST00000558040 INCENPQ9NQS7 918 aa19.89■□□□□ 0.77
SNX1-203ENST00000558040 TACC3Q9Y6A5 838 aa19.89■□□□□ 0.77
SNX1-203ENST00000558040 DDTLA6NHG4 134 aaPredicted RBP19.88■□□□□ 0.77
SNX1-203ENST00000558040 RANBP6O60518 1105 aaKnown RBP19.88■□□□□ 0.77
SNX1-203ENST00000558040 PRDM1O75626 825 aa19.88■□□□□ 0.77
SNX1-203ENST00000558040 CDK8P49336 464 aa19.88■□□□□ 0.77
SNX1-203ENST00000558040 GABPAQ06546 454 aa19.88■□□□□ 0.77
SNX1-203ENST00000558040 USP50Q70EL3 339 aaPredicted RBP19.88■□□□□ 0.77
SNX1-203ENST00000558040 ZNF444Q8N0Y2 327 aaPredicted RBP19.88■□□□□ 0.77
SNX1-203ENST00000558040 TCEANC2Q96MN5 208 aa19.88■□□□□ 0.77
SNX1-203ENST00000558040 IPO9Q96P70 1041 aaKnown RBP19.88■□□□□ 0.77
SNX1-203ENST00000558040 CSRNP1Q96S65 589 aa19.88■□□□□ 0.77
SNX1-203ENST00000558040 TBC1D2Q9BYX2 928 aa19.88■□□□□ 0.77
SNX1-203ENST00000558040 ZSWIM5Q9P217 1185 aa19.88■□□□□ 0.77
SNX1-203ENST00000558040 PITPNM2Q9BZ72 1349 aa19.87■□□□□ 0.77
SNX1-203ENST00000558040 ERICH2A1L162 156 aa19.87■□□□□ 0.77
SNX1-203ENST00000558040 K7ELQ4 463 aaPredicted RBP19.87■□□□□ 0.77
SNX1-203ENST00000558040 CD2BP2O95400 341 aaKnown RBP19.87■□□□□ 0.77
SNX1-203ENST00000558040 ANGEL2Q5VTE6 544 aaKnown RBP19.87■□□□□ 0.77
SNX1-203ENST00000558040 Q6ZUG5 572 aa19.87■□□□□ 0.77
SNX1-203ENST00000558040 CYB5R4Q7L1T6 521 aa19.87■□□□□ 0.77
SNX1-203ENST00000558040 SH3BP5LQ7L8J4 393 aa19.87■□□□□ 0.77
SNX1-203ENST00000558040 IQCA1Q86XH1 822 aa19.87■□□□□ 0.77
SNX1-203ENST00000558040 FBXL16Q8N461 479 aa19.87■□□□□ 0.77
SNX1-203ENST00000558040 UBAC1Q9BSL1 405 aa19.87■□□□□ 0.77
SNX1-203ENST00000558040 GGA3Q9NZ52 723 aa19.87■□□□□ 0.77
SNX1-203ENST00000558040 SCN4AP35499 1836 aa19.87■□□□□ 0.77
SNX1-203ENST00000558040 WDR90Q96KV7 1748 aa19.87■□□□□ 0.77
SNX1-203ENST00000558040 TSPY2A6NKD2 308 aa19.86■□□□□ 0.77
SNX1-203ENST00000558040 EPHX2P34913 555 aa19.86■□□□□ 0.77
SNX1-203ENST00000558040 ANTXR2P58335 489 aa19.86■□□□□ 0.77
SNX1-203ENST00000558040 COL9A3Q14050 684 aaPredicted RBP19.86■□□□□ 0.77
SNX1-203ENST00000558040 RASA3Q14644 834 aa19.86■□□□□ 0.77
SNX1-203ENST00000558040 CHST3Q7LGC8 479 aa19.86■□□□□ 0.77
SNX1-203ENST00000558040 SLC44A5Q8NCS7 719 aa19.86■□□□□ 0.77
SNX1-203ENST00000558040 HERC5Q9UII4 1024 aaKnown RBP19.86■□□□□ 0.77
SNX1-203ENST00000558040 LIMCH1Q9UPQ0 1083 aa19.86■□□□□ 0.77
SNX1-203ENST00000558040 PPP2R3BQ9Y5P8 575 aa19.86■□□□□ 0.77
SNX1-203ENST00000558040 ASTN2O75129 1339 aaPredicted RBP19.85■□□□□ 0.77
SNX1-203ENST00000558040 HIRAP54198 1017 aaPredicted RBP19.85■□□□□ 0.77
SNX1-203ENST00000558040 TOB2Q14106 344 aaPredicted RBP19.85■□□□□ 0.77
SNX1-203ENST00000558040 CCDC178Q5BJE1 867 aa19.85■□□□□ 0.77
SNX1-203ENST00000558040 METTL16Q86W50 562 aaKnown RBP19.85■□□□□ 0.77
SNX1-203ENST00000558040 ZSCAN31Q96LW9 406 aaPredicted RBP19.85■□□□□ 0.77
SNX1-203ENST00000558040 LRRC2Q9BYS8 371 aa19.85■□□□□ 0.77
SNX1-203ENST00000558040 AGXT2Q9BYV1 514 aa19.85■□□□□ 0.77
SNX1-203ENST00000558040 TMEM39BQ9GZU3 492 aa19.85■□□□□ 0.77
SNX1-203ENST00000558040 ANGEL1Q9UNK9 670 aaKnown RBP19.85■□□□□ 0.77
SNX1-203ENST00000558040 IFIT3O14879 490 aaKnown RBP19.84■□□□□ 0.77
SNX1-203ENST00000558040 TSPY3P0CV98 308 aa19.84■□□□□ 0.77
SNX1-203ENST00000558040 TSPY8P0CW00 308 aa19.84■□□□□ 0.77
SNX1-203ENST00000558040 RASA1P20936 1047 aa19.84■□□□□ 0.77
SNX1-203ENST00000558040 TMEM67Q5HYA8 995 aa19.84■□□□□ 0.77
SNX1-203ENST00000558040 NOL8Q76FK4 1167 aaKnown RBP19.84■□□□□ 0.77
SNX1-203ENST00000558040 BRF1Q92994 677 aa19.84■□□□□ 0.77
SNX1-203ENST00000558040 DCPSQ96C86 337 aaKnown RBP19.84■□□□□ 0.77
SNX1-203ENST00000558040 HOOK2Q96ED9 719 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms