RNA–Protein interactions for RNA: ENST00000558026.1

IGKV2D-28-202, Transcript of immunoglobulin kappa variable 2D-28, humanhuman

BASIC

Gene IGKV2D-28, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28-202ENST00000558026 CASP7P55210 303 aa12.32□□□□□ -0.44
IGKV2D-28-202ENST00000558026 LMOD3Q0VAK6 560 aa12.32□□□□□ -0.44
IGKV2D-28-202ENST00000558026 CCDC129Q6ZRS4 1044 aa12.32□□□□□ -0.44
IGKV2D-28-202ENST00000558026 SOCS4Q8WXH5 440 aa12.32□□□□□ -0.44
IGKV2D-28-202ENST00000558026 LPAR1Q92633 364 aa12.32□□□□□ -0.44
IGKV2D-28-202ENST00000558026 TSPYL2Q9H2G4 693 aaPredicted RBP12.32□□□□□ -0.44
IGKV2D-28-202ENST00000558026 FAM198AQ9UFP1 575 aa12.32□□□□□ -0.44
IGKV2D-28-202ENST00000558026 DDX20Q9UHI6 824 aaKnown RBP12.32□□□□□ -0.44
IGKV2D-28-202ENST00000558026 SNX17Q15036 470 aa12.31□□□□□ -0.44
IGKV2D-28-202ENST00000558026 AAK1Q2M2I8 961 aa12.31□□□□□ -0.44
IGKV2D-28-202ENST00000558026 CDC42EP5Q6NZY7 148 aa12.31□□□□□ -0.44
IGKV2D-28-202ENST00000558026 TRMT44Q8IYL2 757 aaKnown RBP12.31□□□□□ -0.44
IGKV2D-28-202ENST00000558026 UIMC1Q96RL1 719 aa12.31□□□□□ -0.44
IGKV2D-28-202ENST00000558026 TXNRD2Q9NNW7 524 aa12.31□□□□□ -0.44
IGKV2D-28-202ENST00000558026 FLRT1Q9NZU1 646 aa12.31□□□□□ -0.44
IGKV2D-28-202ENST00000558026 MORF4L1Q9UBU8 362 aa12.31□□□□□ -0.44
IGKV2D-28-202ENST00000558026 CHMP3Q9Y3E7 222 aa12.31□□□□□ -0.44
IGKV2D-28-202ENST00000558026 MYCNP04198 464 aaPredicted RBP12.3□□□□□ -0.44
IGKV2D-28-202ENST00000558026 TLE2Q04725 743 aa12.3□□□□□ -0.44
IGKV2D-28-202ENST00000558026 FPGSQ05932 587 aa12.3□□□□□ -0.44
IGKV2D-28-202ENST00000558026 NEXNQ0ZGT2 675 aa12.3□□□□□ -0.44
IGKV2D-28-202ENST00000558026 IFIT5Q13325 482 aaKnown RBP12.3□□□□□ -0.44
IGKV2D-28-202ENST00000558026 SKIV2LQ15477 1246 aaKnown RBP12.3□□□□□ -0.44
IGKV2D-28-202ENST00000558026 ANO1Q5XXA6 986 aa12.3□□□□□ -0.44
IGKV2D-28-202ENST00000558026 KSR2Q6VAB6 950 aa12.3□□□□□ -0.44
IGKV2D-28-202ENST00000558026 FERMT2Q96AC1 680 aa12.3□□□□□ -0.44
IGKV2D-28-202ENST00000558026 FBXL18Q96ME1 805 aa12.3□□□□□ -0.44
IGKV2D-28-202ENST00000558026 PHOX2BQ99453 314 aa12.3□□□□□ -0.44
IGKV2D-28-202ENST00000558026 PNNQ9H307 717 aaKnown RBP12.3□□□□□ -0.44
IGKV2D-28-202ENST00000558026 CD320Q9NPF0 282 aa12.3□□□□□ -0.44
IGKV2D-28-202ENST00000558026 GBF1Q92538 1859 aa12.29□□□□□ -0.44
IGKV2D-28-202ENST00000558026 ZDBF2Q9HCK1 2354 aa12.29□□□□□ -0.44
IGKV2D-28-202ENST00000558026 PI4K2BG5E9Z4 385 aa12.29□□□□□ -0.44
IGKV2D-28-202ENST00000558026 TLL1O43897 1013 aa12.29□□□□□ -0.44
IGKV2D-28-202ENST00000558026 RGS2P41220 211 aa12.29□□□□□ -0.44
IGKV2D-28-202ENST00000558026 HMGCS2P54868 508 aa12.29□□□□□ -0.44
IGKV2D-28-202ENST00000558026 MORN1Q5T089 497 aa12.29□□□□□ -0.44
IGKV2D-28-202ENST00000558026 HHIPL2Q6UWX4 724 aa12.29□□□□□ -0.44
IGKV2D-28-202ENST00000558026 PROCA1Q8NCQ7 364 aaPredicted RBP12.29□□□□□ -0.44
IGKV2D-28-202ENST00000558026 TRPV1Q8NER1 839 aa12.29□□□□□ -0.44
IGKV2D-28-202ENST00000558026 APBA2Q99767 749 aa12.29□□□□□ -0.44
IGKV2D-28-202ENST00000558026 MRIQ9BWK5 157 aa12.29□□□□□ -0.44
IGKV2D-28-202ENST00000558026 PORCNQ9H237 461 aa12.29□□□□□ -0.44
IGKV2D-28-202ENST00000558026 MBIPQ9NS73 344 aa12.29□□□□□ -0.44
IGKV2D-28-202ENST00000558026 TRIM35Q9UPQ4 493 aa12.29□□□□□ -0.44
IGKV2D-28-202ENST00000558026 PRRC2BQ5JSZ5 2229 aaKnown RBP12.29□□□□□ -0.44
IGKV2D-28-202ENST00000558026 PRR33A8MZF0 331 aa12.28□□□□□ -0.44
IGKV2D-28-202ENST00000558026 FRAT2O75474 233 aaPredicted RBP12.28□□□□□ -0.44
IGKV2D-28-202ENST00000558026 RAG1P15918 1043 aa12.28□□□□□ -0.44
IGKV2D-28-202ENST00000558026 ADCYAP1R1P41586 468 aa12.28□□□□□ -0.44
IGKV2D-28-202ENST00000558026 SPP2Q13103 211 aa12.28□□□□□ -0.44
IGKV2D-28-202ENST00000558026 UBE4AQ14139 1066 aa12.28□□□□□ -0.44
IGKV2D-28-202ENST00000558026 GCKRQ14397 625 aa12.28□□□□□ -0.44
IGKV2D-28-202ENST00000558026 LDHAL6AQ6ZMR3 332 aa12.28□□□□□ -0.44
IGKV2D-28-202ENST00000558026 TBC1D22AQ8WUA7 517 aa12.28□□□□□ -0.44
IGKV2D-28-202ENST00000558026 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.28□□□□□ -0.44
IGKV2D-28-202ENST00000558026 SPINK5Q9NQ38 1064 aaPredicted RBP12.28□□□□□ -0.44
IGKV2D-28-202ENST00000558026 CNNM1Q9NRU3 951 aa12.28□□□□□ -0.44
IGKV2D-28-202ENST00000558026 LRRFIP2Q9Y608 721 aaKnown RBP12.28□□□□□ -0.44
IGKV2D-28-202ENST00000558026 NDUFB9Q9Y6M9 179 aa12.28□□□□□ -0.44
IGKV2D-28-202ENST00000558026 CFAP54Q96N23 3096 aa12.28□□□□□ -0.44
IGKV2D-28-202ENST00000558026 KBTBD13C9JR72 458 aa12.27□□□□□ -0.45
IGKV2D-28-202ENST00000558026 ERC2O15083 957 aa12.27□□□□□ -0.45
IGKV2D-28-202ENST00000558026 CTNND1O60716 968 aaKnown RBP12.27□□□□□ -0.45
IGKV2D-28-202ENST00000558026 FOXO4P98177 505 aa12.27□□□□□ -0.45
IGKV2D-28-202ENST00000558026 DIXDC1Q155Q3 683 aa12.27□□□□□ -0.45
IGKV2D-28-202ENST00000558026 Q3C1V9 767 aa12.27□□□□□ -0.45
IGKV2D-28-202ENST00000558026 MFSD14CQ5VZR4 134 aa12.27□□□□□ -0.45
IGKV2D-28-202ENST00000558026 SH3BP5LQ7L8J4 393 aa12.27□□□□□ -0.45
IGKV2D-28-202ENST00000558026 GPR142Q7Z601 462 aa12.27□□□□□ -0.45
IGKV2D-28-202ENST00000558026 FBXO33Q7Z6M2 555 aa12.27□□□□□ -0.45
IGKV2D-28-202ENST00000558026 NKX2-4Q9H2Z4 354 aa12.27□□□□□ -0.45
IGKV2D-28-202ENST00000558026 TACC3Q9Y6A5 838 aa12.27□□□□□ -0.45
IGKV2D-28-202ENST00000558026 KIAA0355O15063 1070 aa12.26□□□□□ -0.45
IGKV2D-28-202ENST00000558026 MSCO60682 206 aa12.26□□□□□ -0.45
IGKV2D-28-202ENST00000558026 CLTBP09497 229 aa12.26□□□□□ -0.45
IGKV2D-28-202ENST00000558026 MAPK4P31152 587 aa12.26□□□□□ -0.45
IGKV2D-28-202ENST00000558026 CYP2C19P33261 490 aa12.26□□□□□ -0.45
IGKV2D-28-202ENST00000558026 VPS37DQ86XT2 251 aa12.26□□□□□ -0.45
IGKV2D-28-202ENST00000558026 GPRC5AQ8NFJ5 357 aa12.26□□□□□ -0.45
IGKV2D-28-202ENST00000558026 UTYO14607 1347 aa12.26□□□□□ -0.45
IGKV2D-28-202ENST00000558026 MAST3O60307 1309 aa12.26□□□□□ -0.45
IGKV2D-28-202ENST00000558026 FAM196BA6NMK8 535 aa12.25□□□□□ -0.45
IGKV2D-28-202ENST00000558026 RGS3P49796 1198 aa12.25□□□□□ -0.45
IGKV2D-28-202ENST00000558026 IRX3P78415 501 aaPredicted RBP12.25□□□□□ -0.45
IGKV2D-28-202ENST00000558026 TRIM26Q12899 539 aaPredicted RBP12.25□□□□□ -0.45
IGKV2D-28-202ENST00000558026 MAP2K5Q13163 448 aa12.25□□□□□ -0.45
IGKV2D-28-202ENST00000558026 PABPC4Q13310 644 aaKnown RBP eCLIP12.25□□□□□ -0.45
IGKV2D-28-202ENST00000558026 C16orf59Q7L2K0 433 aa12.25□□□□□ -0.45
IGKV2D-28-202ENST00000558026 PLEKHH3Q7Z736 793 aa12.25□□□□□ -0.45
IGKV2D-28-202ENST00000558026 ZSCAN29Q8IWY8 852 aaPredicted RBP12.25□□□□□ -0.45
IGKV2D-28-202ENST00000558026 CCDC146Q8IYE0 955 aa12.25□□□□□ -0.45
IGKV2D-28-202ENST00000558026 ARRDC4Q8NCT1 418 aa12.25□□□□□ -0.45
IGKV2D-28-202ENST00000558026 ANKS1AQ92625 1134 aa12.25□□□□□ -0.45
IGKV2D-28-202ENST00000558026 PUS3Q9BZE2 481 aaKnown RBP12.25□□□□□ -0.45
IGKV2D-28-202ENST00000558026 USP40Q9NVE5 1235 aa12.25□□□□□ -0.45
IGKV2D-28-202ENST00000558026 RBPJLQ9UBG7 517 aa12.25□□□□□ -0.45
IGKV2D-28-202ENST00000558026 DDTLA6NHG4 134 aaPredicted RBP12.24□□□□□ -0.45
IGKV2D-28-202ENST00000558026 PQBP1O60828 265 aaKnown RBP12.24□□□□□ -0.45
IGKV2D-28-202ENST00000558026 HERVK_113P62684 666 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms