RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 MCM9Q9NXL9 1143 aa20.09■□□□□ 0.81
PBX4-202ENST00000557978 THSD7BQ9C0I4 1608 aa20.08■□□□□ 0.81
PBX4-202ENST00000557978 M0R2C6 588 aa20.08■□□□□ 0.8
PBX4-202ENST00000557978 PRKAB2O43741 272 aa20.08■□□□□ 0.8
PBX4-202ENST00000557978 SDSP20132 328 aa20.08■□□□□ 0.8
PBX4-202ENST00000557978 MAP2K2P36507 400 aa20.08■□□□□ 0.8
PBX4-202ENST00000557978 GIMAP6Q6P9H5 292 aa20.08■□□□□ 0.8
PBX4-202ENST00000557978 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.08■□□□□ 0.8
PBX4-202ENST00000557978 RASAL3Q86YV0 1011 aa20.08■□□□□ 0.8
PBX4-202ENST00000557978 CRACR2BQ8N4Y2 399 aaPredicted RBP20.08■□□□□ 0.8
PBX4-202ENST00000557978 SEC62Q99442 399 aaKnown RBP20.08■□□□□ 0.8
PBX4-202ENST00000557978 GSPT1P15170 499 aaKnown RBP20.07■□□□□ 0.8
PBX4-202ENST00000557978 VGLL4Q14135 290 aa20.07■□□□□ 0.8
PBX4-202ENST00000557978 MCMDC2Q4G0Z9 681 aa20.07■□□□□ 0.8
PBX4-202ENST00000557978 METTL16Q86W50 562 aaKnown RBP20.07■□□□□ 0.8
PBX4-202ENST00000557978 ZKSCAN4Q969J2 545 aaPredicted RBP20.07■□□□□ 0.8
PBX4-202ENST00000557978 DIAPH3Q9NSV4 1193 aa20.07■□□□□ 0.8
PBX4-202ENST00000557978 FAM155AB1AL88 458 aaPredicted RBP20.06■□□□□ 0.8
PBX4-202ENST00000557978 PATL2C9JE40 543 aaKnown RBP20.06■□□□□ 0.8
PBX4-202ENST00000557978 ZBTB48P10074 688 aaPredicted RBP20.06■□□□□ 0.8
PBX4-202ENST00000557978 MFAP1P55081 439 aaKnown RBP20.06■□□□□ 0.8
PBX4-202ENST00000557978 CLMNQ96JQ2 1002 aa20.06■□□□□ 0.8
PBX4-202ENST00000557978 EHD4Q9H223 541 aa20.06■□□□□ 0.8
PBX4-202ENST00000557978 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.06■□□□□ 0.8
PBX4-202ENST00000557978 SERPINB13Q9UIV8 391 aa20.06■□□□□ 0.8
PBX4-202ENST00000557978 PHIPQ8WWQ0 1821 aa20.06■□□□□ 0.8
PBX4-202ENST00000557978 PHF20L1A8MW92 1017 aa20.05■□□□□ 0.8
PBX4-202ENST00000557978 CTNND1O60716 968 aaKnown RBP20.05■□□□□ 0.8
PBX4-202ENST00000557978 APPP05067 770 aa20.05■□□□□ 0.8
PBX4-202ENST00000557978 INPP5BP32019 993 aa20.05■□□□□ 0.8
PBX4-202ENST00000557978 REM2Q8IYK8 340 aaPredicted RBP20.05■□□□□ 0.8
PBX4-202ENST00000557978 JMYQ8N9B5 988 aa20.05■□□□□ 0.8
PBX4-202ENST00000557978 NACAP1Q9BZK3 213 aa20.05■□□□□ 0.8
PBX4-202ENST00000557978 ELP3Q9H9T3 547 aa20.05■□□□□ 0.8
PBX4-202ENST00000557978 TAOK2Q9UL54 1235 aa20.05■□□□□ 0.8
PBX4-202ENST00000557978 PTPRFP10586 1907 aa20.04■□□□□ 0.8
PBX4-202ENST00000557978 GSG1L2A8MUP6 293 aa20.04■□□□□ 0.8
PBX4-202ENST00000557978 PLCD1P51178 756 aa20.04■□□□□ 0.8
PBX4-202ENST00000557978 NMIQ13287 307 aaPredicted RBP20.04■□□□□ 0.8
PBX4-202ENST00000557978 SLC4A8Q2Y0W8 1093 aa20.04■□□□□ 0.8
PBX4-202ENST00000557978 NOL9Q5SY16 702 aaKnown RBP20.04■□□□□ 0.8
PBX4-202ENST00000557978 FAM227BQ96M60 508 aa20.04■□□□□ 0.8
PBX4-202ENST00000557978 ARPP21Q9UBL0 812 aaPredicted RBP20.04■□□□□ 0.8
PBX4-202ENST00000557978 A0A0D9SFI3 127 aa20.03■□□□□ 0.8
PBX4-202ENST00000557978 FAM196BA6NMK8 535 aa20.03■□□□□ 0.8
PBX4-202ENST00000557978 AOC2O75106 756 aa20.03■□□□□ 0.8
PBX4-202ENST00000557978 SPRYD7Q5W111 196 aa20.03■□□□□ 0.8
PBX4-202ENST00000557978 ERO1BQ86YB8 467 aa20.03■□□□□ 0.8
PBX4-202ENST00000557978 WNK4Q96J92 1243 aa20.03■□□□□ 0.8
PBX4-202ENST00000557978 SNCAIPQ9Y6H5 919 aa20.03■□□□□ 0.8
PBX4-202ENST00000557978 USP17L12C9JPN9 530 aa20.02■□□□□ 0.8
PBX4-202ENST00000557978 USP17L21D6R901 530 aa20.02■□□□□ 0.8
PBX4-202ENST00000557978 TDO2P48775 406 aa20.02■□□□□ 0.8
PBX4-202ENST00000557978 PPATQ06203 517 aa20.02■□□□□ 0.8
PBX4-202ENST00000557978 SBK1Q52WX2 424 aa20.02■□□□□ 0.8
PBX4-202ENST00000557978 CWC27Q6UX04 472 aaKnown RBP20.02■□□□□ 0.8
PBX4-202ENST00000557978 SCYL3Q8IZE3 742 aa20.02■□□□□ 0.8
PBX4-202ENST00000557978 IFNL3Q8IZI9 196 aa20.02■□□□□ 0.8
PBX4-202ENST00000557978 OPTNQ96CV9 577 aa20.02■□□□□ 0.8
PBX4-202ENST00000557978 PICK1Q9NRD5 415 aa20.02■□□□□ 0.8
PBX4-202ENST00000557978 SPDYE5A6NIY4 337 aa20.02■□□□□ 0.79
PBX4-202ENST00000557978 SLURP2P0DP57 97 aa20.02■□□□□ 0.79
PBX4-202ENST00000557978 CAP2P40123 477 aa20.02■□□□□ 0.79
PBX4-202ENST00000557978 KIF23Q02241 960 aaPredicted RBP20.02■□□□□ 0.79
PBX4-202ENST00000557978 MAP2K1Q02750 393 aaPredicted RBP20.02■□□□□ 0.79
PBX4-202ENST00000557978 C12orf60Q5U649 245 aa20.02■□□□□ 0.79
PBX4-202ENST00000557978 CTR9Q6PD62 1173 aa20.02■□□□□ 0.79
PBX4-202ENST00000557978 CCDC129Q6ZRS4 1044 aa20.02■□□□□ 0.79
PBX4-202ENST00000557978 CCDC171Q6TFL3 1326 aa20.01■□□□□ 0.79
PBX4-202ENST00000557978 INHBEP58166 350 aa20.01■□□□□ 0.79
PBX4-202ENST00000557978 BMP2KLQ5H9B9 411 aa20.01■□□□□ 0.79
PBX4-202ENST00000557978 TATDN1Q6P1N9 297 aa20.01■□□□□ 0.79
PBX4-202ENST00000557978 RUFY2Q8WXA3 655 aa20.01■□□□□ 0.79
PBX4-202ENST00000557978 OTUD5Q96G74 571 aa20.01■□□□□ 0.79
PBX4-202ENST00000557978 NAPBQ9H115 298 aa20.01■□□□□ 0.79
PBX4-202ENST00000557978 DNAJC18Q9H819 358 aa20.01■□□□□ 0.79
PBX4-202ENST00000557978 GINM1Q9NU53 330 aa20.01■□□□□ 0.79
PBX4-202ENST00000557978 SWAP70Q9UH65 585 aa20.01■□□□□ 0.79
PBX4-202ENST00000557978 MANSC4A6NHS7 340 aaPredicted RBP20■□□□□ 0.79
PBX4-202ENST00000557978 GABPAQ06546 454 aa20■□□□□ 0.79
PBX4-202ENST00000557978 SREBF2Q12772 1141 aa20■□□□□ 0.79
PBX4-202ENST00000557978 MKRN3Q13064 507 aaKnown RBP20■□□□□ 0.79
PBX4-202ENST00000557978 EPB41L4AQ9HCS5 686 aaPredicted RBP20■□□□□ 0.79
PBX4-202ENST00000557978 ASNSP08243 561 aa19.99■□□□□ 0.79
PBX4-202ENST00000557978 CYP2D6P10635 497 aa19.99■□□□□ 0.79
PBX4-202ENST00000557978 PPIL2Q13356 520 aa19.99■□□□□ 0.79
PBX4-202ENST00000557978 CERKLQ49MI3 558 aaPredicted RBP19.99■□□□□ 0.79
PBX4-202ENST00000557978 SKAP1Q86WV1 359 aa19.99■□□□□ 0.79
PBX4-202ENST00000557978 BEGAINQ9BUH8 593 aa19.99■□□□□ 0.79
PBX4-202ENST00000557978 MINDY4BA8MYZ0 360 aa19.98■□□□□ 0.79
PBX4-202ENST00000557978 PTPRAP18433 802 aa19.98■□□□□ 0.79
PBX4-202ENST00000557978 ZNF589Q86UQ0 364 aaPredicted RBP19.98■□□□□ 0.79
PBX4-202ENST00000557978 CNKSR2Q8WXI2 1034 aa19.98■□□□□ 0.79
PBX4-202ENST00000557978 ZIC5Q96T25 663 aa19.98■□□□□ 0.79
PBX4-202ENST00000557978 TBC1D2Q9BYX2 928 aa19.98■□□□□ 0.79
PBX4-202ENST00000557978 RAD50Q92878 1312 aa19.97■□□□□ 0.79
PBX4-202ENST00000557978 LAMA4Q16363 1823 aa19.97■□□□□ 0.79
PBX4-202ENST00000557978 IRF6O14896 467 aa19.97■□□□□ 0.79
PBX4-202ENST00000557978 HSPD1P10809 573 aaKnown RBP19.97■□□□□ 0.79
PBX4-202ENST00000557978 CHMLP26374 656 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms