RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 FCGRTP55899 365 aa8.74□□□□□ -1.01
SPTLC2-206ENST00000557566 PRKCZQ05513 592 aa8.74□□□□□ -1.01
SPTLC2-206ENST00000557566 NFE2L2Q16236 605 aa8.74□□□□□ -1.01
SPTLC2-206ENST00000557566 TXNRD3Q86VQ6 643 aa8.74□□□□□ -1.01
SPTLC2-206ENST00000557566 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.74□□□□□ -1.01
SPTLC2-206ENST00000557566 PRMT6Q96LA8 375 aaPredicted RBP8.74□□□□□ -1.01
SPTLC2-206ENST00000557566 BSDC1Q9NW68 430 aaPredicted RBP8.74□□□□□ -1.01
SPTLC2-206ENST00000557566 BABAM1Q9NWV8 329 aa8.74□□□□□ -1.01
SPTLC2-206ENST00000557566 CHPF2Q9P2E5 772 aa8.74□□□□□ -1.01
SPTLC2-206ENST00000557566 RAPGEFL1Q9UHV5 662 aa8.74□□□□□ -1.01
SPTLC2-206ENST00000557566 MINPP1Q9UNW1 487 aa8.74□□□□□ -1.01
SPTLC2-206ENST00000557566 LEMD3Q9Y2U8 911 aa8.74□□□□□ -1.01
SPTLC2-206ENST00000557566 DNAH12Q6ZR08 3092 aa8.73□□□□□ -1.01
SPTLC2-206ENST00000557566 F8W031 263 aaPredicted RBP8.73□□□□□ -1.01
SPTLC2-206ENST00000557566 TNFRSF10AO00220 468 aa8.73□□□□□ -1.01
SPTLC2-206ENST00000557566 ADCY3O60266 1144 aa8.73□□□□□ -1.01
SPTLC2-206ENST00000557566 INHAP05111 366 aa8.73□□□□□ -1.01
SPTLC2-206ENST00000557566 RBM5P52756 815 aaKnown RBP eCLIP8.73□□□□□ -1.01
SPTLC2-206ENST00000557566 ZNF697Q5TEC3 545 aa8.73□□□□□ -1.01
SPTLC2-206ENST00000557566 ERO1BQ86YB8 467 aa8.73□□□□□ -1.01
SPTLC2-206ENST00000557566 ANKLE1Q8NAG6 615 aa8.73□□□□□ -1.01
SPTLC2-206ENST00000557566 MAFAQ8NHW3 353 aaPredicted RBP8.73□□□□□ -1.01
SPTLC2-206ENST00000557566 PCMTD1Q96MG8 357 aaPredicted RBP8.73□□□□□ -1.01
SPTLC2-206ENST00000557566 FAM161BQ96MY7 647 aa8.73□□□□□ -1.01
SPTLC2-206ENST00000557566 PAK6Q9NQU5 681 aaPredicted RBP8.73□□□□□ -1.01
SPTLC2-206ENST00000557566 PCDHAC2Q9Y5I4 1007 aa8.73□□□□□ -1.01
SPTLC2-206ENST00000557566 DDX60LQ5H9U9 1706 aaKnown RBP8.72□□□□□ -1.01
SPTLC2-206ENST00000557566 ANP32CO43423 234 aa8.72□□□□□ -1.01
SPTLC2-206ENST00000557566 PCCAP05165 728 aaPredicted RBP8.72□□□□□ -1.01
SPTLC2-206ENST00000557566 PPIL2Q13356 520 aa8.72□□□□□ -1.01
SPTLC2-206ENST00000557566 KMT5BQ4FZB7 885 aa8.72□□□□□ -1.01
SPTLC2-206ENST00000557566 CERS5Q8N5B7 392 aa8.72□□□□□ -1.01
SPTLC2-206ENST00000557566 DIS3LQ8TF46 1054 aaKnown RBP8.72□□□□□ -1.01
SPTLC2-206ENST00000557566 NCOR1O75376 2440 aa8.72□□□□□ -1.01
SPTLC2-206ENST00000557566 COL2A1P02458 1487 aaPredicted RBP8.71□□□□□ -1.01
SPTLC2-206ENST00000557566 TMEM265A0A087WTH1 108 aa8.71□□□□□ -1.02
SPTLC2-206ENST00000557566 PDHXO00330 501 aa8.71□□□□□ -1.02
SPTLC2-206ENST00000557566 ELNP15502 786 aa8.71□□□□□ -1.02
SPTLC2-206ENST00000557566 TNNI2P48788 182 aa8.71□□□□□ -1.02
SPTLC2-206ENST00000557566 HDGFL1Q5TGJ6 251 aa8.71□□□□□ -1.02
SPTLC2-206ENST00000557566 MYSM1Q5VVJ2 828 aa8.71□□□□□ -1.02
SPTLC2-206ENST00000557566 ANKRD23Q86SG2 305 aa8.71□□□□□ -1.02
SPTLC2-206ENST00000557566 CDX2Q99626 313 aaPredicted RBP8.71□□□□□ -1.02
SPTLC2-206ENST00000557566 TBC1D2Q9BYX2 928 aa8.71□□□□□ -1.02
SPTLC2-206ENST00000557566 CD209Q9NNX6 404 aa8.71□□□□□ -1.02
SPTLC2-206ENST00000557566 DBF4Q9UBU7 674 aaPredicted RBP8.71□□□□□ -1.02
SPTLC2-206ENST00000557566 GABRQQ9UN88 632 aa8.71□□□□□ -1.02
SPTLC2-206ENST00000557566 SNCAIPQ9Y6H5 919 aa8.71□□□□□ -1.02
SPTLC2-206ENST00000557566 AOX1Q06278 1338 aa8.71□□□□□ -1.02
SPTLC2-206ENST00000557566 MAPK8IP3Q9UPT6 1336 aa8.71□□□□□ -1.02
SPTLC2-206ENST00000557566 KLRK1P26718 216 aa8.7□□□□□ -1.02
SPTLC2-206ENST00000557566 KCNJ4P48050 445 aa8.7□□□□□ -1.02
SPTLC2-206ENST00000557566 FLT3LGP49771 235 aa8.7□□□□□ -1.02
SPTLC2-206ENST00000557566 CTSWP56202 376 aa8.7□□□□□ -1.02
SPTLC2-206ENST00000557566 FKBP1AP62942 108 aaKnown RBP8.7□□□□□ -1.02
SPTLC2-206ENST00000557566 TUSC1Q2TAM9 212 aa8.7□□□□□ -1.02
SPTLC2-206ENST00000557566 TJAP1Q5JTD0 557 aa8.7□□□□□ -1.02
SPTLC2-206ENST00000557566 RIC3Q7Z5B4 369 aa8.7□□□□□ -1.02
SPTLC2-206ENST00000557566 CCDC191Q8NCU4 936 aa8.7□□□□□ -1.02
SPTLC2-206ENST00000557566 TEPSINQ96N21 525 aa8.7□□□□□ -1.02
SPTLC2-206ENST00000557566 PARK7Q99497 189 aaKnown RBP8.7□□□□□ -1.02
SPTLC2-206ENST00000557566 PRR14Q9BWN1 585 aa8.7□□□□□ -1.02
SPTLC2-206ENST00000557566 ANKRD2Q9GZV1 360 aa8.7□□□□□ -1.02
SPTLC2-206ENST00000557566 C11orf49Q9H6J7 331 aa8.7□□□□□ -1.02
SPTLC2-206ENST00000557566 HYPKQ9NX55 129 aa8.7□□□□□ -1.02
SPTLC2-206ENST00000557566 CWC25Q9NXE8 425 aaPredicted RBP8.7□□□□□ -1.02
SPTLC2-206ENST00000557566 ZNF70Q9UC06 446 aaPredicted RBP8.7□□□□□ -1.02
SPTLC2-206ENST00000557566 BDP1A6H8Y1 2624 aa8.7□□□□□ -1.02
SPTLC2-206ENST00000557566 BCRP11274 1271 aa8.69□□□□□ -1.02
SPTLC2-206ENST00000557566 PPP2R1AP30153 589 aa8.69□□□□□ -1.02
SPTLC2-206ENST00000557566 IGHMBP2P38935 993 aaKnown RBP8.69□□□□□ -1.02
SPTLC2-206ENST00000557566 PPATQ06203 517 aa8.69□□□□□ -1.02
SPTLC2-206ENST00000557566 IRF5Q13568 498 aa8.69□□□□□ -1.02
SPTLC2-206ENST00000557566 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.69□□□□□ -1.02
SPTLC2-206ENST00000557566 SPIRE2Q8WWL2 714 aa8.69□□□□□ -1.02
SPTLC2-206ENST00000557566 WRNIP1Q96S55 665 aa8.69□□□□□ -1.02
SPTLC2-206ENST00000557566 PLEKHF1Q96S99 279 aa8.69□□□□□ -1.02
SPTLC2-206ENST00000557566 MYD88Q99836 296 aa8.69□□□□□ -1.02
SPTLC2-206ENST00000557566 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.69□□□□□ -1.02
SPTLC2-206ENST00000557566 TMEM39BQ9GZU3 492 aa8.69□□□□□ -1.02
SPTLC2-206ENST00000557566 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.69□□□□□ -1.02
SPTLC2-206ENST00000557566 PNNQ9H307 717 aaKnown RBP8.69□□□□□ -1.02
SPTLC2-206ENST00000557566 DOCK3Q8IZD9 2030 aa8.69□□□□□ -1.02
SPTLC2-206ENST00000557566 TCP10L2B9ZVM9 353 aa8.68□□□□□ -1.02
SPTLC2-206ENST00000557566 TNPO2O14787 897 aaKnown RBP8.68□□□□□ -1.02
SPTLC2-206ENST00000557566 HOXB7P09629 217 aa8.68□□□□□ -1.02
SPTLC2-206ENST00000557566 DDX10Q13206 875 aaKnown RBP8.68□□□□□ -1.02
SPTLC2-206ENST00000557566 NYAP1Q6ZVC0 841 aa8.68□□□□□ -1.02
SPTLC2-206ENST00000557566 TTLL11Q8NHH1 800 aa8.68□□□□□ -1.02
SPTLC2-206ENST00000557566 JARID2Q92833 1246 aaPredicted RBP8.68□□□□□ -1.02
SPTLC2-206ENST00000557566 ZKSCAN4Q969J2 545 aaPredicted RBP8.68□□□□□ -1.02
SPTLC2-206ENST00000557566 HOOK2Q96ED9 719 aa8.68□□□□□ -1.02
SPTLC2-206ENST00000557566 GREM2Q9H772 168 aa8.68□□□□□ -1.02
SPTLC2-206ENST00000557566 TDRD3Q9H7E2 651 aaKnown RBP8.68□□□□□ -1.02
SPTLC2-206ENST00000557566 FOSL2P15408 326 aa8.67□□□□□ -1.02
SPTLC2-206ENST00000557566 LMOD3Q0VAK6 560 aa8.67□□□□□ -1.02
SPTLC2-206ENST00000557566 MAP3K12Q12852 859 aa8.67□□□□□ -1.02
SPTLC2-206ENST00000557566 KRT24Q2M2I5 525 aa8.67□□□□□ -1.02
SPTLC2-206ENST00000557566 ZNF804AQ7Z570 1209 aa8.67□□□□□ -1.02
SPTLC2-206ENST00000557566 PIEZO1Q92508 2521 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms