RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 SRRTQ9BXP5 876 aaKnown RBP6.86□□□□□ -1.31
MTHFD1-216ENST00000557539 RRAGCQ9HB90 399 aa6.86□□□□□ -1.31
MTHFD1-216ENST00000557539 KCNQ5Q9NR82 932 aa6.86□□□□□ -1.31
MTHFD1-216ENST00000557539 PRKAG3Q9UGI9 489 aa6.86□□□□□ -1.31
MTHFD1-216ENST00000557539 KCNH4Q9UQ05 1017 aa6.86□□□□□ -1.31
MTHFD1-216ENST00000557539 KIF14Q15058 1648 aa6.86□□□□□ -1.31
MTHFD1-216ENST00000557539 REREQ9P2R6 1566 aa6.86□□□□□ -1.31
MTHFD1-216ENST00000557539 ITSN2Q9NZM3 1697 aa6.85□□□□□ -1.31
MTHFD1-216ENST00000557539 FAM221BA6H8Z2 402 aa6.85□□□□□ -1.31
MTHFD1-216ENST00000557539 EFSO43281 561 aa6.85□□□□□ -1.31
MTHFD1-216ENST00000557539 MARCH6O60337 910 aa6.85□□□□□ -1.31
MTHFD1-216ENST00000557539 PROCP04070 461 aa6.85□□□□□ -1.31
MTHFD1-216ENST00000557539 FAM157BP0CG42 384 aa6.85□□□□□ -1.31
MTHFD1-216ENST00000557539 RARAP10276 462 aa6.85□□□□□ -1.31
MTHFD1-216ENST00000557539 ACPPP15309 386 aa6.85□□□□□ -1.31
MTHFD1-216ENST00000557539 CHMP4BP1P59074 171 aa6.85□□□□□ -1.31
MTHFD1-216ENST00000557539 ANAPC15P60006 121 aa6.85□□□□□ -1.31
MTHFD1-216ENST00000557539 CCINQ13939 588 aa6.85□□□□□ -1.31
MTHFD1-216ENST00000557539 FILIP1Q7Z7B0 1213 aa6.85□□□□□ -1.31
MTHFD1-216ENST00000557539 FCHSD1Q86WN1 690 aa6.85□□□□□ -1.31
MTHFD1-216ENST00000557539 MICAL1Q8TDZ2 1067 aa6.85□□□□□ -1.31
MTHFD1-216ENST00000557539 OSMRQ99650 979 aa6.85□□□□□ -1.31
MTHFD1-216ENST00000557539 SPOCK3Q9BQ16 436 aa6.85□□□□□ -1.31
MTHFD1-216ENST00000557539 ZKSCAN3Q9BRR0 538 aa6.85□□□□□ -1.31
MTHFD1-216ENST00000557539 CEP44Q9C0F1 390 aa6.85□□□□□ -1.31
MTHFD1-216ENST00000557539 MKL2Q9ULH7 1088 aa6.85□□□□□ -1.31
MTHFD1-216ENST00000557539 DIP2CQ9Y2E4 1556 aa6.85□□□□□ -1.31
MTHFD1-216ENST00000557539 SMAD7O15105 426 aaKnown RBP6.84□□□□□ -1.31
MTHFD1-216ENST00000557539 TRPA1O75762 1119 aa6.84□□□□□ -1.31
MTHFD1-216ENST00000557539 CRKP46108 304 aa6.84□□□□□ -1.31
MTHFD1-216ENST00000557539 LMNB2Q03252 620 aa6.84□□□□□ -1.31
MTHFD1-216ENST00000557539 SFSWAPQ12872 951 aaKnown RBP6.84□□□□□ -1.31
MTHFD1-216ENST00000557539 RASA3Q14644 834 aa6.84□□□□□ -1.31
MTHFD1-216ENST00000557539 GRIN2CQ14957 1233 aa6.84□□□□□ -1.31
MTHFD1-216ENST00000557539 SAMD5Q5TGI4 173 aa6.84□□□□□ -1.31
MTHFD1-216ENST00000557539 TTBK2Q6IQ55 1244 aa6.84□□□□□ -1.31
MTHFD1-216ENST00000557539 CCNJLQ8IV13 435 aa6.84□□□□□ -1.31
MTHFD1-216ENST00000557539 AFAP1Q8N556 730 aa6.84□□□□□ -1.31
MTHFD1-216ENST00000557539 ZCRB1Q8TBF4 217 aaKnown RBP6.84□□□□□ -1.31
MTHFD1-216ENST00000557539 LRRC59Q96AG4 307 aaKnown RBP6.84□□□□□ -1.31
MTHFD1-216ENST00000557539 CAMKK2Q96RR4 588 aa6.84□□□□□ -1.31
MTHFD1-216ENST00000557539 GSX2Q9BZM3 304 aa6.84□□□□□ -1.31
MTHFD1-216ENST00000557539 ZFYVE1Q9HBF4 777 aa6.84□□□□□ -1.31
MTHFD1-216ENST00000557539 PPT2Q9UMR5 302 aa6.84□□□□□ -1.31
MTHFD1-216ENST00000557539 BRWD3Q6RI45 1802 aa6.84□□□□□ -1.31
MTHFD1-216ENST00000557539 DLC1Q96QB1 1528 aa6.84□□□□□ -1.31
MTHFD1-216ENST00000557539 FAM135AQ9P2D6 1515 aa6.84□□□□□ -1.31
MTHFD1-216ENST00000557539 A2MP01023 1474 aa6.84□□□□□ -1.31
MTHFD1-216ENST00000557539 MSTNO14793 375 aa6.83□□□□□ -1.32
MTHFD1-216ENST00000557539 TLR3O15455 904 aaKnown RBP6.83□□□□□ -1.32
MTHFD1-216ENST00000557539 TFE3P19532 575 aaPredicted RBP6.83□□□□□ -1.32
MTHFD1-216ENST00000557539 GRIA4P48058 902 aa6.83□□□□□ -1.32
MTHFD1-216ENST00000557539 DGKGP49619 791 aa6.83□□□□□ -1.32
MTHFD1-216ENST00000557539 KCNQ4P56696 695 aa6.83□□□□□ -1.32
MTHFD1-216ENST00000557539 SEZ6Q53EL9 994 aa6.83□□□□□ -1.32
MTHFD1-216ENST00000557539 SHDQ96IW2 340 aa6.83□□□□□ -1.32
MTHFD1-216ENST00000557539 PNMA5Q96PV4 448 aa6.83□□□□□ -1.32
MTHFD1-216ENST00000557539 IFT57Q9NWB7 429 aa6.83□□□□□ -1.32
MTHFD1-216ENST00000557539 ZFATQ9P243 1243 aa6.83□□□□□ -1.32
MTHFD1-216ENST00000557539 NOP58Q9Y2X3 529 aaKnown RBP6.83□□□□□ -1.32
MTHFD1-216ENST00000557539 COL4A3BPQ9Y5P4 624 aa6.83□□□□□ -1.32
MTHFD1-216ENST00000557539 CAMSAP2Q08AD1 1489 aa6.83□□□□□ -1.32
MTHFD1-216ENST00000557539 MYOM1P52179 1685 aa6.83□□□□□ -1.32
MTHFD1-216ENST00000557539 CLTCQ00610 1675 aaKnown RBP6.83□□□□□ -1.32
MTHFD1-216ENST00000557539 ATP7AQ04656 1500 aa6.82□□□□□ -1.32
MTHFD1-216ENST00000557539 SPHKAPQ2M3C7 1700 aa6.82□□□□□ -1.32
MTHFD1-216ENST00000557539 METTL12A8MUP2 240 aa6.82□□□□□ -1.32
MTHFD1-216ENST00000557539 ENC1O14682 589 aa6.82□□□□□ -1.32
MTHFD1-216ENST00000557539 PSAPP07602 524 aa6.82□□□□□ -1.32
MTHFD1-216ENST00000557539 NFKB1P19838 968 aa6.82□□□□□ -1.32
MTHFD1-216ENST00000557539 AMPD1P23109 780 aa6.82□□□□□ -1.32
MTHFD1-216ENST00000557539 ADH6P28332 368 aa6.82□□□□□ -1.32
MTHFD1-216ENST00000557539 PCBP4P57723 403 aaKnown RBP6.82□□□□□ -1.32
MTHFD1-216ENST00000557539 HYAL2Q12891 473 aa6.82□□□□□ -1.32
MTHFD1-216ENST00000557539 SPRED3Q2MJR0 410 aa6.82□□□□□ -1.32
MTHFD1-216ENST00000557539 TNNI3KQ59H18 835 aa6.82□□□□□ -1.32
MTHFD1-216ENST00000557539 FBXW10Q5XX13 1052 aa6.82□□□□□ -1.32
MTHFD1-216ENST00000557539 AGMOQ6ZNB7 445 aa6.82□□□□□ -1.32
MTHFD1-216ENST00000557539 FAM196AQ6ZSG2 479 aa6.82□□□□□ -1.32
MTHFD1-216ENST00000557539 CHSY3Q70JA7 882 aa6.82□□□□□ -1.32
MTHFD1-216ENST00000557539 NOL8Q76FK4 1167 aaKnown RBP6.82□□□□□ -1.32
MTHFD1-216ENST00000557539 NECAB3Q96P71 396 aaPredicted RBP6.82□□□□□ -1.32
MTHFD1-216ENST00000557539 POLR3GLQ9BT43 218 aa6.82□□□□□ -1.32
MTHFD1-216ENST00000557539 MARK1Q9P0L2 795 aa6.82□□□□□ -1.32
MTHFD1-216ENST00000557539 ZC3H13Q5T200 1668 aaKnown RBP6.81□□□□□ -1.32
MTHFD1-216ENST00000557539 CDC45O75419 566 aa6.81□□□□□ -1.32
MTHFD1-216ENST00000557539 PAGE1O75459 146 aa6.81□□□□□ -1.32
MTHFD1-216ENST00000557539 TOMM70O94826 608 aa6.81□□□□□ -1.32
MTHFD1-216ENST00000557539 ZBTB7AO95365 584 aa6.81□□□□□ -1.32
MTHFD1-216ENST00000557539 LMNB1P20700 586 aa6.81□□□□□ -1.32
MTHFD1-216ENST00000557539 MCM4P33991 863 aa6.81□□□□□ -1.32
MTHFD1-216ENST00000557539 EIF6P56537 245 aaKnown RBP6.81□□□□□ -1.32
MTHFD1-216ENST00000557539 ZNF468Q5VIY5 522 aaPredicted RBP6.81□□□□□ -1.32
MTHFD1-216ENST00000557539 LRP10Q7Z4F1 713 aa6.81□□□□□ -1.32
MTHFD1-216ENST00000557539 SLITRK4Q8IW52 837 aa6.81□□□□□ -1.32
MTHFD1-216ENST00000557539 CELF2-AS1Q8N7Q2 184 aa6.81□□□□□ -1.32
MTHFD1-216ENST00000557539 FBXO27Q8NI29 283 aa6.81□□□□□ -1.32
MTHFD1-216ENST00000557539 SH3TC2Q8TF17 1288 aa6.81□□□□□ -1.32
MTHFD1-216ENST00000557539 HHIPQ96QV1 700 aa6.81□□□□□ -1.32
MTHFD1-216ENST00000557539 MDFIQ99750 246 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms