RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 FASTKD5Q7L8L6 764 aaKnown RBP9.46□□□□□ -0.9
PSEN1-222ENST00000557356 ADGRA1Q86SQ6 560 aa9.46□□□□□ -0.9
PSEN1-222ENST00000557356 METTL16Q86W50 562 aaKnown RBP9.46□□□□□ -0.9
PSEN1-222ENST00000557356 MAPKAPK5Q8IW41 473 aa9.46□□□□□ -0.9
PSEN1-222ENST00000557356 CDAN1Q8IWY9 1227 aa9.46□□□□□ -0.9
PSEN1-222ENST00000557356 MIGA1Q8NAN2 632 aa9.46□□□□□ -0.9
PSEN1-222ENST00000557356 EHD4Q9H223 541 aa9.46□□□□□ -0.9
PSEN1-222ENST00000557356 AS3MTQ9HBK9 375 aa9.46□□□□□ -0.9
PSEN1-222ENST00000557356 STAP2Q9UGK3 403 aa9.46□□□□□ -0.9
PSEN1-222ENST00000557356 SNCAIPQ9Y6H5 919 aa9.46□□□□□ -0.9
PSEN1-222ENST00000557356 NDUFB9Q9Y6M9 179 aa9.46□□□□□ -0.9
PSEN1-222ENST00000557356 AKAP11Q9UKA4 1901 aa9.45□□□□□ -0.9
PSEN1-222ENST00000557356 CCL15-CCL14A0A0B4J2E2 113 aa9.45□□□□□ -0.9
PSEN1-222ENST00000557356 TCRBV5S4A2TA0A5A2 114 aa9.45□□□□□ -0.9
PSEN1-222ENST00000557356 RNF113AO15541 343 aaKnown RBP9.45□□□□□ -0.9
PSEN1-222ENST00000557356 ASNSP08243 561 aa9.45□□□□□ -0.9
PSEN1-222ENST00000557356 PTPRAP18433 802 aa9.45□□□□□ -0.9
PSEN1-222ENST00000557356 CAP2P40123 477 aa9.45□□□□□ -0.9
PSEN1-222ENST00000557356 DYNLL1P63167 89 aaKnown RBP9.45□□□□□ -0.9
PSEN1-222ENST00000557356 CCL15Q16663 113 aa9.45□□□□□ -0.9
PSEN1-222ENST00000557356 GIMAP6Q6P9H5 292 aa9.45□□□□□ -0.9
PSEN1-222ENST00000557356 CHD1LQ86WJ1 897 aa9.45□□□□□ -0.9
PSEN1-222ENST00000557356 APPBP2Q92624 585 aa9.45□□□□□ -0.9
PSEN1-222ENST00000557356 EVI5LQ96CN4 794 aa9.45□□□□□ -0.9
PSEN1-222ENST00000557356 MS4A4AQ96JQ5 239 aa9.45□□□□□ -0.9
PSEN1-222ENST00000557356 RIOK1Q9BRS2 568 aaKnown RBP9.45□□□□□ -0.9
PSEN1-222ENST00000557356 ZFYVE28Q9HCC9 887 aa9.45□□□□□ -0.9
PSEN1-222ENST00000557356 MCM9Q9NXL9 1143 aa9.45□□□□□ -0.9
PSEN1-222ENST00000557356 SERPINB13Q9UIV8 391 aa9.45□□□□□ -0.9
PSEN1-222ENST00000557356 PALD1Q9ULE6 856 aa9.45□□□□□ -0.9
PSEN1-222ENST00000557356 KCNH4Q9UQ05 1017 aa9.45□□□□□ -0.9
PSEN1-222ENST00000557356 FLT1P17948 1338 aa9.45□□□□□ -0.9
PSEN1-222ENST00000557356 THSD7BQ9C0I4 1608 aa9.45□□□□□ -0.9
PSEN1-222ENST00000557356 USP17L5A8MUK1 530 aa9.44□□□□□ -0.9
PSEN1-222ENST00000557356 IRF6O14896 467 aa9.44□□□□□ -0.9
PSEN1-222ENST00000557356 PDE1AP54750 535 aa9.44□□□□□ -0.9
PSEN1-222ENST00000557356 NUCB1Q02818 461 aa9.44□□□□□ -0.9
PSEN1-222ENST00000557356 PKN2Q16513 984 aaKnown RBP9.44□□□□□ -0.9
PSEN1-222ENST00000557356 TNS4Q8IZW8 715 aa9.44□□□□□ -0.9
PSEN1-222ENST00000557356 EDC3Q96F86 508 aaKnown RBP9.44□□□□□ -0.9
PSEN1-222ENST00000557356 NACAP1Q9BZK3 213 aa9.44□□□□□ -0.9
PSEN1-222ENST00000557356 ZNF287Q9HBT7 754 aa9.44□□□□□ -0.9
PSEN1-222ENST00000557356 CABP5Q9NP86 173 aa9.44□□□□□ -0.9
PSEN1-222ENST00000557356 SWAP70Q9UH65 585 aa9.44□□□□□ -0.9
PSEN1-222ENST00000557356 ZHX2Q9Y6X8 837 aa9.44□□□□□ -0.9
PSEN1-222ENST00000557356 C19orf81C9J6K1 198 aa9.43□□□□□ -0.9
PSEN1-222ENST00000557356 GPR25O00155 361 aa9.43□□□□□ -0.9
PSEN1-222ENST00000557356 FKTNO75072 461 aa9.43□□□□□ -0.9
PSEN1-222ENST00000557356 TBC1D8O95759 1140 aa9.43□□□□□ -0.9
PSEN1-222ENST00000557356 IGHDP01880 384 aa9.43□□□□□ -0.9
PSEN1-222ENST00000557356 GJA5P36382 358 aa9.43□□□□□ -0.9
PSEN1-222ENST00000557356 PABPC4Q13310 644 aaKnown RBP eCLIP9.43□□□□□ -0.9
PSEN1-222ENST00000557356 COL13A1Q5TAT6 717 aaPredicted RBP9.43□□□□□ -0.9
PSEN1-222ENST00000557356 ANKRD23Q86SG2 305 aa9.43□□□□□ -0.9
PSEN1-222ENST00000557356 PI4K2BQ8TCG2 481 aa9.43□□□□□ -0.9
PSEN1-222ENST00000557356 CCDC17Q96LX7 622 aa9.43□□□□□ -0.9
PSEN1-222ENST00000557356 FSD1Q9BTV5 496 aa9.43□□□□□ -0.9
PSEN1-222ENST00000557356 LNPKQ9C0E8 428 aa9.43□□□□□ -0.9
PSEN1-222ENST00000557356 OSBPL3Q9H4L5 887 aa9.43□□□□□ -0.9
PSEN1-222ENST00000557356 DCP1AQ9NPI6 582 aaPredicted RBP9.43□□□□□ -0.9
PSEN1-222ENST00000557356 SAP30BPQ9UHR5 308 aaKnown RBP9.43□□□□□ -0.9
PSEN1-222ENST00000557356 SLC45A1Q9Y2W3 748 aa9.43□□□□□ -0.9
PSEN1-222ENST00000557356 AFG3L2Q9Y4W6 797 aa9.43□□□□□ -0.9
PSEN1-222ENST00000557356 SLC4A4Q9Y6R1 1079 aa9.43□□□□□ -0.9
PSEN1-222ENST00000557356 AK9Q5TCS8 1911 aa9.43□□□□□ -0.9
PSEN1-222ENST00000557356 MBD4O95243 580 aa9.42□□□□□ -0.9
PSEN1-222ENST00000557356 MFAP1P55081 439 aaKnown RBP9.42□□□□□ -0.9
PSEN1-222ENST00000557356 KIF22Q14807 665 aa9.42□□□□□ -0.9
PSEN1-222ENST00000557356 TAF1CQ15572 869 aaPredicted RBP9.42□□□□□ -0.9
PSEN1-222ENST00000557356 CERKLQ49MI3 558 aaPredicted RBP9.42□□□□□ -0.9
PSEN1-222ENST00000557356 B4GALNT3Q6L9W6 998 aa9.42□□□□□ -0.9
PSEN1-222ENST00000557356 TATDN1Q6P1N9 297 aa9.42□□□□□ -0.9
PSEN1-222ENST00000557356 LCORLQ8N3X6 602 aa9.42□□□□□ -0.9
PSEN1-222ENST00000557356 ZNF280CQ8ND82 737 aa9.42□□□□□ -0.9
PSEN1-222ENST00000557356 BRI3BPQ8WY22 251 aa9.42□□□□□ -0.9
PSEN1-222ENST00000557356 ERO1AQ96HE7 468 aa9.42□□□□□ -0.9
PSEN1-222ENST00000557356 STRBPQ96SI9 672 aaKnown RBP9.42□□□□□ -0.9
PSEN1-222ENST00000557356 WDR18Q9BV38 432 aa9.42□□□□□ -0.9
PSEN1-222ENST00000557356 ARMT1Q9H993 441 aa9.42□□□□□ -0.9
PSEN1-222ENST00000557356 TSKSQ9UJT2 592 aa9.42□□□□□ -0.9
PSEN1-222ENST00000557356 SALL3Q9BXA9 1300 aa9.41□□□□□ -0.9
PSEN1-222ENST00000557356 PATL2C9JE40 543 aaKnown RBP9.41□□□□□ -0.9
PSEN1-222ENST00000557356 HIP1O00291 1037 aa9.41□□□□□ -0.9
PSEN1-222ENST00000557356 IGF2BP3O00425 579 aaKnown RBP eCLIP9.41□□□□□ -0.9
PSEN1-222ENST00000557356 TLR2O60603 784 aa9.41□□□□□ -0.9
PSEN1-222ENST00000557356 APPP05067 770 aa9.41□□□□□ -0.9
PSEN1-222ENST00000557356 SLC3A2P08195 630 aaKnown RBP9.41□□□□□ -0.9
PSEN1-222ENST00000557356 SPP2Q13103 211 aa9.41□□□□□ -0.9
PSEN1-222ENST00000557356 CTU1Q7Z7A3 348 aaKnown RBP9.41□□□□□ -0.9
PSEN1-222ENST00000557356 PROCA1Q8NCQ7 364 aaPredicted RBP9.41□□□□□ -0.9
PSEN1-222ENST00000557356 PTPN18Q99952 460 aa9.41□□□□□ -0.9
PSEN1-222ENST00000557356 PUS7LQ9H0K6 701 aaKnown RBP9.41□□□□□ -0.9
PSEN1-222ENST00000557356 TMOD4Q9NZQ9 345 aa9.41□□□□□ -0.9
PSEN1-222ENST00000557356 ARPP21Q9UBL0 812 aaPredicted RBP9.41□□□□□ -0.9
PSEN1-222ENST00000557356 PNMA3Q9UL41 463 aa9.41□□□□□ -0.9
PSEN1-222ENST00000557356 MAST2Q6P0Q8 1798 aa9.41□□□□□ -0.9
PSEN1-222ENST00000557356 A0A0G2JLL6 359 aaPredicted RBP9.4□□□□□ -0.9
PSEN1-222ENST00000557356 TRIM75PA6NK02 468 aa9.4□□□□□ -0.9
PSEN1-222ENST00000557356 TRIM6-TRIM34B2RNG4 842 aa9.4□□□□□ -0.9
PSEN1-222ENST00000557356 BTBD19C9JJ37 291 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms