RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 OSBPL5Q9H0X9 879 aaPredicted RBP15.23■□□□□ 0.03
SNX6-209ENST00000557265 ASCC2Q9H1I8 757 aaPredicted RBP15.23■□□□□ 0.03
SNX6-209ENST00000557265 GJD2Q9UKL4 321 aa15.23■□□□□ 0.03
SNX6-209ENST00000557265 TRIM32Q13049 653 aa15.22■□□□□ 0.03
SNX6-209ENST00000557265 PABPC4Q13310 644 aaKnown RBP eCLIP15.22■□□□□ 0.03
SNX6-209ENST00000557265 RRP1BQ14684 758 aaKnown RBP15.22■□□□□ 0.03
SNX6-209ENST00000557265 MVPQ14764 893 aaKnown RBP15.22■□□□□ 0.03
SNX6-209ENST00000557265 ANKLE1Q8NAG6 615 aa15.22■□□□□ 0.03
SNX6-209ENST00000557265 CDCA7LQ96GN5 454 aa15.22■□□□□ 0.03
SNX6-209ENST00000557265 MEIS3Q99687 375 aa15.22■□□□□ 0.03
SNX6-209ENST00000557265 GDF15Q99988 308 aa15.22■□□□□ 0.03
SNX6-209ENST00000557265 HMX1Q9NP08 348 aaPredicted RBP15.22■□□□□ 0.03
SNX6-209ENST00000557265 ZMYND8Q9ULU4 1186 aaPredicted RBP15.22■□□□□ 0.03
SNX6-209ENST00000557265 AKAP2Q9Y2D5 859 aa15.22■□□□□ 0.03
SNX6-209ENST00000557265 RPTORQ8N122 1335 aa15.21■□□□□ 0.03
SNX6-209ENST00000557265 LDHCP07864 332 aa15.21■□□□□ 0.03
SNX6-209ENST00000557265 BMP8BP34820 402 aa15.21■□□□□ 0.03
SNX6-209ENST00000557265 CAP2P40123 477 aa15.21■□□□□ 0.03
SNX6-209ENST00000557265 GSTO1P78417 241 aa15.21■□□□□ 0.03
SNX6-209ENST00000557265 PI16Q6UXB8 463 aa15.21■□□□□ 0.03
SNX6-209ENST00000557265 TBC1D9Q6ZT07 1266 aa15.21■□□□□ 0.03
SNX6-209ENST00000557265 NEUROD6Q96NK8 337 aa15.21■□□□□ 0.03
SNX6-209ENST00000557265 API5Q9BZZ5 524 aaKnown RBP15.21■□□□□ 0.03
SNX6-209ENST00000557265 NBPF3Q9H094 633 aa15.21■□□□□ 0.03
SNX6-209ENST00000557265 HMG20BQ9P0W2 317 aa15.21■□□□□ 0.03
SNX6-209ENST00000557265 LAMA3Q16787 3333 aa15.21■□□□□ 0.03
SNX6-209ENST00000557265 ZNF316A6NFI3 1004 aaPredicted RBP15.2■□□□□ 0.02
SNX6-209ENST00000557265 USP17L5A8MUK1 530 aa15.2■□□□□ 0.02
SNX6-209ENST00000557265 SRGAP3O43295 1099 aa15.2■□□□□ 0.02
SNX6-209ENST00000557265 MAP4K4O95819 1239 aaPredicted RBP15.2■□□□□ 0.02
SNX6-209ENST00000557265 MNX1P50219 401 aaPredicted RBP15.2■□□□□ 0.02
SNX6-209ENST00000557265 SPATA5Q8NB90 893 aa15.2■□□□□ 0.02
SNX6-209ENST00000557265 NSUN4Q96CB9 384 aaKnown RBP15.2■□□□□ 0.02
SNX6-209ENST00000557265 TBC1D2Q9BYX2 928 aa15.2■□□□□ 0.02
SNX6-209ENST00000557265 RAI14Q9P0K7 980 aa15.2■□□□□ 0.02
SNX6-209ENST00000557265 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.2■□□□□ 0.02
SNX6-209ENST00000557265 SYN1P17600 705 aa15.19■□□□□ 0.02
SNX6-209ENST00000557265 CYP2B6P20813 491 aa15.19■□□□□ 0.02
SNX6-209ENST00000557265 SH3D19Q5HYK7 790 aa15.19■□□□□ 0.02
SNX6-209ENST00000557265 GORABQ5T7V8 394 aa15.19■□□□□ 0.02
SNX6-209ENST00000557265 C11orf49Q9H6J7 331 aa15.19■□□□□ 0.02
SNX6-209ENST00000557265 AS3MTQ9HBK9 375 aa15.19■□□□□ 0.02
SNX6-209ENST00000557265 DOCK2Q92608 1830 aa15.18■□□□□ 0.02
SNX6-209ENST00000557265 MYH13Q9UKX3 1938 aa15.18■□□□□ 0.02
SNX6-209ENST00000557265 PEX10O60683 326 aa15.18■□□□□ 0.02
SNX6-209ENST00000557265 IRX3P78415 501 aaPredicted RBP15.18■□□□□ 0.02
SNX6-209ENST00000557265 TEX11Q8IYF3 940 aa15.18■□□□□ 0.02
SNX6-209ENST00000557265 TRIB2Q92519 343 aa15.18■□□□□ 0.02
SNX6-209ENST00000557265 P2RX7Q99572 595 aaKnown RBP15.18■□□□□ 0.02
SNX6-209ENST00000557265 MORF4L1Q9UBU8 362 aa15.18■□□□□ 0.02
SNX6-209ENST00000557265 OGDHLQ9ULD0 1010 aa15.18■□□□□ 0.02
SNX6-209ENST00000557265 MGAMO43451 1857 aa15.18■□□□□ 0.02
SNX6-209ENST00000557265 MAGEA10P43363 369 aaPredicted RBP15.17■□□□□ 0.02
SNX6-209ENST00000557265 MTMR2Q13614 643 aa15.17■□□□□ 0.02
SNX6-209ENST00000557265 GPR153Q6NV75 609 aa15.17■□□□□ 0.02
SNX6-209ENST00000557265 TRMT2AQ8IZ69 625 aaKnown RBP15.17■□□□□ 0.02
SNX6-209ENST00000557265 DEFB123Q8N688 67 aa15.17■□□□□ 0.02
SNX6-209ENST00000557265 GPRC5AQ8NFJ5 357 aa15.17■□□□□ 0.02
SNX6-209ENST00000557265 SH3RF3Q8TEJ3 882 aaPredicted RBP15.17■□□□□ 0.02
SNX6-209ENST00000557265 WDR18Q9BV38 432 aa15.17■□□□□ 0.02
SNX6-209ENST00000557265 TMOD4Q9NZQ9 345 aa15.17■□□□□ 0.02
SNX6-209ENST00000557265 PI4KBQ9UBF8 816 aa15.17■□□□□ 0.02
SNX6-209ENST00000557265 HERC5Q9UII4 1024 aaKnown RBP15.17■□□□□ 0.02
SNX6-209ENST00000557265 CUL9Q8IWT3 2517 aa15.17■□□□□ 0.02
SNX6-209ENST00000557265 MYH2Q9UKX2 1941 aa15.17■□□□□ 0.02
SNX6-209ENST00000557265 COL2A1P02458 1487 aaPredicted RBP15.16■□□□□ 0.02
SNX6-209ENST00000557265 GNAI3P08754 354 aa15.16■□□□□ 0.02
SNX6-209ENST00000557265 PRKAR2AP13861 404 aaKnown RBP15.16■□□□□ 0.02
SNX6-209ENST00000557265 BACE1P56817 501 aa15.16■□□□□ 0.02
SNX6-209ENST00000557265 JAG1P78504 1218 aa15.16■□□□□ 0.02
SNX6-209ENST00000557265 MTX1Q13505 466 aa15.16■□□□□ 0.02
SNX6-209ENST00000557265 MAP3K21Q5TCX8 1036 aa15.16■□□□□ 0.02
SNX6-209ENST00000557265 Q7L0L9 218 aa15.16■□□□□ 0.02
SNX6-209ENST00000557265 NUDT12Q9BQG2 462 aa15.16■□□□□ 0.02
SNX6-209ENST00000557265 TXNRD2Q9NNW7 524 aa15.16■□□□□ 0.02
SNX6-209ENST00000557265 LRP2BPQ9P2M1 347 aa15.16■□□□□ 0.02
SNX6-209ENST00000557265 DOCK1Q14185 1865 aa15.16■□□□□ 0.02
SNX6-209ENST00000557265 A0A0C4DFX4 3053 aa15.15■□□□□ 0.02
SNX6-209ENST00000557265 CT47B1P0C2W7 299 aaPredicted RBP15.15■□□□□ 0.02
SNX6-209ENST00000557265 XRCC5P13010 732 aaKnown RBP15.15■□□□□ 0.02
SNX6-209ENST00000557265 ARID4AP29374 1257 aaPredicted RBP15.15■□□□□ 0.02
SNX6-209ENST00000557265 HOXA7P31268 230 aaPredicted RBP15.15■□□□□ 0.02
SNX6-209ENST00000557265 MCAMP43121 646 aa15.15■□□□□ 0.02
SNX6-209ENST00000557265 LRIT3Q3SXY7 679 aa15.15■□□□□ 0.02
SNX6-209ENST00000557265 TDHQ8IZJ6 230 aa15.15■□□□□ 0.02
SNX6-209ENST00000557265 NOL10Q9BSC4 688 aaKnown RBP15.15■□□□□ 0.02
SNX6-209ENST00000557265 DHX36Q9H2U1 1008 aaKnown RBP15.15■□□□□ 0.02
SNX6-209ENST00000557265 PHIPQ8WWQ0 1821 aa15.15■□□□□ 0.02
SNX6-209ENST00000557265 ASNSP08243 561 aa15.14■□□□□ 0.01
SNX6-209ENST00000557265 HERVK_113P62684 666 aa15.14■□□□□ 0.01
SNX6-209ENST00000557265 TGFBRAP1Q8WUH2 860 aa15.14■□□□□ 0.01
SNX6-209ENST00000557265 SOCS4Q8WXH5 440 aa15.14■□□□□ 0.01
SNX6-209ENST00000557265 UBE2OQ9C0C9 1292 aaKnown RBP15.14■□□□□ 0.01
SNX6-209ENST00000557265 AATFQ9NY61 560 aaKnown RBP eCLIP15.14■□□□□ 0.01
SNX6-209ENST00000557265 RBPJLQ9UBG7 517 aa15.14■□□□□ 0.01
SNX6-209ENST00000557265 PFASO15067 1338 aa15.14■□□□□ 0.01
SNX6-209ENST00000557265 PTPRFP10586 1907 aa15.13■□□□□ 0.01
SNX6-209ENST00000557265 C19orf81C9J6K1 198 aa15.13■□□□□ 0.01
SNX6-209ENST00000557265 USP17L10C9JJH3 530 aa15.13■□□□□ 0.01
SNX6-209ENST00000557265 GDF11O95390 407 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms