RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 ESYT3A0FGR9 886 aa7.84□□□□□ -1.15
FOXN3-215ENST00000557261 TIMP2P16035 220 aa7.84□□□□□ -1.15
FOXN3-215ENST00000557261 IBSPP21815 317 aaPredicted RBP7.84□□□□□ -1.15
FOXN3-215ENST00000557261 GTF2E1P29083 439 aaPredicted RBP7.84□□□□□ -1.15
FOXN3-215ENST00000557261 PPP2R1AP30153 589 aa7.84□□□□□ -1.15
FOXN3-215ENST00000557261 PIP4K2BP78356 416 aa7.84□□□□□ -1.15
FOXN3-215ENST00000557261 SAFB2Q14151 953 aaKnown RBP eCLIP7.84□□□□□ -1.15
FOXN3-215ENST00000557261 LCE2CQ5TA81 110 aa7.84□□□□□ -1.15
FOXN3-215ENST00000557261 KIAA0319Q5VV43 1072 aa7.84□□□□□ -1.15
FOXN3-215ENST00000557261 FBXO27Q8NI29 283 aa7.84□□□□□ -1.15
FOXN3-215ENST00000557261 ABI2Q9NYB9 513 aaPredicted RBP7.84□□□□□ -1.15
FOXN3-215ENST00000557261 ZDHHC3Q9NYG2 299 aa7.84□□□□□ -1.15
FOXN3-215ENST00000557261 SALL4Q9UJQ4 1053 aa7.84□□□□□ -1.15
FOXN3-215ENST00000557261 SUGT1Q9Y2Z0 365 aa7.84□□□□□ -1.15
FOXN3-215ENST00000557261 PPME1Q9Y570 386 aa7.84□□□□□ -1.15
FOXN3-215ENST00000557261 MST1RQ04912 1400 aa7.84□□□□□ -1.15
FOXN3-215ENST00000557261 TRPM3Q9HCF6 1732 aaPredicted RBP7.83□□□□□ -1.16
FOXN3-215ENST00000557261 TTC21AQ8NDW8 1320 aa7.83□□□□□ -1.16
FOXN3-215ENST00000557261 MAP2P11137 1827 aaKnown RBP7.83□□□□□ -1.16
FOXN3-215ENST00000557261 TERTO14746 1132 aaKnown RBP7.83□□□□□ -1.16
FOXN3-215ENST00000557261 GREM1O60565 184 aa7.83□□□□□ -1.16
FOXN3-215ENST00000557261 DNAJC6O75061 913 aa7.83□□□□□ -1.16
FOXN3-215ENST00000557261 TRPA1O75762 1119 aa7.83□□□□□ -1.16
FOXN3-215ENST00000557261 CES1P23141 567 aa7.83□□□□□ -1.16
FOXN3-215ENST00000557261 CTSOP43234 321 aaPredicted RBP7.83□□□□□ -1.16
FOXN3-215ENST00000557261 VEGFBP49765 207 aa7.83□□□□□ -1.16
FOXN3-215ENST00000557261 AMPD3Q01432 767 aa7.83□□□□□ -1.16
FOXN3-215ENST00000557261 TYRO3Q06418 890 aa7.83□□□□□ -1.16
FOXN3-215ENST00000557261 CC2D1BQ5T0F9 858 aaKnown RBP7.83□□□□□ -1.16
FOXN3-215ENST00000557261 PCNX4Q63HM2 1172 aa7.83□□□□□ -1.16
FOXN3-215ENST00000557261 TPTE2Q6XPS3 522 aa7.83□□□□□ -1.16
FOXN3-215ENST00000557261 CPLX3Q8WVH0 158 aa7.83□□□□□ -1.16
FOXN3-215ENST00000557261 PLD4Q96BZ4 506 aa7.83□□□□□ -1.16
FOXN3-215ENST00000557261 NT5C1AQ9BXI3 368 aa7.83□□□□□ -1.16
FOXN3-215ENST00000557261 ABCB6Q9NP58 842 aa7.83□□□□□ -1.16
FOXN3-215ENST00000557261 PRKAG3Q9UGI9 489 aa7.83□□□□□ -1.16
FOXN3-215ENST00000557261 TLR3O15455 904 aaKnown RBP7.82□□□□□ -1.16
FOXN3-215ENST00000557261 LIG3P49916 1009 aa7.82□□□□□ -1.16
FOXN3-215ENST00000557261 RNF144AP50876 292 aaPredicted RBP7.82□□□□□ -1.16
FOXN3-215ENST00000557261 PLEKHG6Q3KR16 790 aa7.82□□□□□ -1.16
FOXN3-215ENST00000557261 PLEKHG4Q58EX7 1191 aa7.82□□□□□ -1.16
FOXN3-215ENST00000557261 GOLM1Q8NBJ4 401 aa7.82□□□□□ -1.16
FOXN3-215ENST00000557261 SHDQ96IW2 340 aa7.82□□□□□ -1.16
FOXN3-215ENST00000557261 TCF12Q99081 682 aa7.82□□□□□ -1.16
FOXN3-215ENST00000557261 ZCCHC2Q9C0B9 1178 aaKnown RBP7.82□□□□□ -1.16
FOXN3-215ENST00000557261 G3BP2Q9UN86 482 aaKnown RBP7.82□□□□□ -1.16
FOXN3-215ENST00000557261 PNPLA6Q8IY17 1366 aa7.82□□□□□ -1.16
FOXN3-215ENST00000557261 TMEM238LA0A1B0GVL6 79 aa7.81□□□□□ -1.16
FOXN3-215ENST00000557261 U2SURPO15042 1029 aaKnown RBP7.81□□□□□ -1.16
FOXN3-215ENST00000557261 CLSTN1O94985 981 aa7.81□□□□□ -1.16
FOXN3-215ENST00000557261 TATP17735 454 aaPredicted RBP7.81□□□□□ -1.16
FOXN3-215ENST00000557261 TFE3P19532 575 aaPredicted RBP7.81□□□□□ -1.16
FOXN3-215ENST00000557261 CHMP4BP1P59074 171 aa7.81□□□□□ -1.16
FOXN3-215ENST00000557261 SQSTM1Q13501 440 aa7.81□□□□□ -1.16
FOXN3-215ENST00000557261 CCDC184Q52MB2 194 aa7.81□□□□□ -1.16
FOXN3-215ENST00000557261 PRICKLE2Q7Z3G6 844 aa7.81□□□□□ -1.16
FOXN3-215ENST00000557261 KRT25Q7Z3Z0 450 aa7.81□□□□□ -1.16
FOXN3-215ENST00000557261 NGEFQ8N5V2 710 aa7.81□□□□□ -1.16
FOXN3-215ENST00000557261 CNTNAP3BQ96NU0 1288 aa7.81□□□□□ -1.16
FOXN3-215ENST00000557261 CNTNAP3Q9BZ76 1288 aa7.81□□□□□ -1.16
FOXN3-215ENST00000557261 BRINP2Q9C0B6 783 aa7.81□□□□□ -1.16
FOXN3-215ENST00000557261 KCNQ5Q9NR82 932 aa7.81□□□□□ -1.16
FOXN3-215ENST00000557261 ALS2Q96Q42 1657 aa7.81□□□□□ -1.16
FOXN3-215ENST00000557261 KIF24Q5T7B8 1368 aa7.81□□□□□ -1.16
FOXN3-215ENST00000557261 ABCC6O95255 1503 aa7.8□□□□□ -1.16
FOXN3-215ENST00000557261 FYB1O15117 783 aa7.8□□□□□ -1.16
FOXN3-215ENST00000557261 WIPF1O43516 503 aa7.8□□□□□ -1.16
FOXN3-215ENST00000557261 CDC45O75419 566 aa7.8□□□□□ -1.16
FOXN3-215ENST00000557261 PAGE1O75459 146 aa7.8□□□□□ -1.16
FOXN3-215ENST00000557261 SASH3O75995 380 aa7.8□□□□□ -1.16
FOXN3-215ENST00000557261 CAMK2GQ13555 558 aaPredicted RBP7.8□□□□□ -1.16
FOXN3-215ENST00000557261 SEPT6Q14141 434 aa7.8□□□□□ -1.16
FOXN3-215ENST00000557261 HIF1AQ16665 826 aa7.8□□□□□ -1.16
FOXN3-215ENST00000557261 TKFCQ3LXA3 575 aa7.8□□□□□ -1.16
FOXN3-215ENST00000557261 ARSJQ5FYB0 599 aaPredicted RBP7.8□□□□□ -1.16
FOXN3-215ENST00000557261 COL13A1Q5TAT6 717 aaPredicted RBP7.8□□□□□ -1.16
FOXN3-215ENST00000557261 PRPF40BQ6NWY9 871 aaKnown RBP7.8□□□□□ -1.16
FOXN3-215ENST00000557261 NBPF10Q6P3W6 841 aaKnown RBP7.8□□□□□ -1.16
FOXN3-215ENST00000557261 MORC1Q86VD1 984 aa7.8□□□□□ -1.16
FOXN3-215ENST00000557261 ZFP42Q96MM3 310 aa7.8□□□□□ -1.16
FOXN3-215ENST00000557261 CEP63Q96MT8 703 aa7.8□□□□□ -1.16
FOXN3-215ENST00000557261 SRRTQ9BXP5 876 aaKnown RBP7.8□□□□□ -1.16
FOXN3-215ENST00000557261 SPC25Q9HBM1 224 aa7.8□□□□□ -1.16
FOXN3-215ENST00000557261 LEMD3Q9Y2U8 911 aa7.8□□□□□ -1.16
FOXN3-215ENST00000557261 RGPD1P0DJD0 1748 aa7.8□□□□□ -1.16
FOXN3-215ENST00000557261 METTL12A8MUP2 240 aa7.79□□□□□ -1.16
FOXN3-215ENST00000557261 SPATA31C2B4DYI2 1134 aa7.79□□□□□ -1.16
FOXN3-215ENST00000557261 RHOQP17081 205 aa7.79□□□□□ -1.16
FOXN3-215ENST00000557261 MSX1P28360 303 aa7.79□□□□□ -1.16
FOXN3-215ENST00000557261 APOBRQ0VD83 1088 aa7.79□□□□□ -1.16
FOXN3-215ENST00000557261 PWP1Q13610 501 aa7.79□□□□□ -1.16
FOXN3-215ENST00000557261 SPRED3Q2MJR0 410 aa7.79□□□□□ -1.16
FOXN3-215ENST00000557261 SEZ6Q53EL9 994 aa7.79□□□□□ -1.16
FOXN3-215ENST00000557261 SNAP47Q5SQN1 464 aa7.79□□□□□ -1.16
FOXN3-215ENST00000557261 DTHD1Q6ZMT9 781 aa7.79□□□□□ -1.16
FOXN3-215ENST00000557261 MEIOBQ8N635 442 aa7.79□□□□□ -1.16
FOXN3-215ENST00000557261 ZCRB1Q8TBF4 217 aaKnown RBP7.79□□□□□ -1.16
FOXN3-215ENST00000557261 YTHDC1Q96MU7 727 aaKnown RBP7.79□□□□□ -1.16
FOXN3-215ENST00000557261 HHIPQ96QV1 700 aa7.79□□□□□ -1.16
FOXN3-215ENST00000557261 LIN7BQ9HAP6 207 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms