RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 MED4Q9NPJ6 270 aa14.35□□□□□ -0.11
APEX1-216ENST00000557159 CWC25Q9NXE8 425 aaPredicted RBP14.35□□□□□ -0.11
APEX1-216ENST00000557159 LCMT1Q9UIC8 334 aa14.35□□□□□ -0.11
APEX1-216ENST00000557159 LY75O60449 1722 aa14.35□□□□□ -0.11
APEX1-216ENST00000557159 CPP00450 1065 aa14.34□□□□□ -0.11
APEX1-216ENST00000557159 CCDC175P0C221 793 aa14.34□□□□□ -0.11
APEX1-216ENST00000557159 HSPD1P10809 573 aaKnown RBP14.34□□□□□ -0.11
APEX1-216ENST00000557159 EN1Q05925 392 aaPredicted RBP14.34□□□□□ -0.11
APEX1-216ENST00000557159 GNL2Q13823 731 aaKnown RBP14.34□□□□□ -0.11
APEX1-216ENST00000557159 SLC27A3Q5K4L6 730 aa14.34□□□□□ -0.11
APEX1-216ENST00000557159 DEFB132Q7Z7B7 95 aa14.34□□□□□ -0.11
APEX1-216ENST00000557159 ENOX1Q8TC92 643 aaKnown RBP14.34□□□□□ -0.11
APEX1-216ENST00000557159 FBXW7Q969H0 707 aa14.34□□□□□ -0.11
APEX1-216ENST00000557159 DHX58Q96C10 678 aa14.34□□□□□ -0.11
APEX1-216ENST00000557159 ACBD3Q9H3P7 528 aa14.34□□□□□ -0.11
APEX1-216ENST00000557159 LRRC4BQ9NT99 713 aa14.34□□□□□ -0.11
APEX1-216ENST00000557159 DACH1Q9UI36 760 aa14.34□□□□□ -0.11
APEX1-216ENST00000557159 CCNL1Q9UK58 526 aaPredicted RBP14.34□□□□□ -0.11
APEX1-216ENST00000557159 MROH7-TTC4A0A0A0MT08 1334 aa14.34□□□□□ -0.11
APEX1-216ENST00000557159 NBPF26B4DH59 902 aa14.34□□□□□ -0.11
APEX1-216ENST00000557159 KCNQ4P56696 695 aa14.34□□□□□ -0.11
APEX1-216ENST00000557159 GUCY1B3Q02153 619 aa14.34□□□□□ -0.11
APEX1-216ENST00000557159 TAF7LQ5H9L4 462 aa14.34□□□□□ -0.11
APEX1-216ENST00000557159 NBPF14Q5TI25 921 aa14.34□□□□□ -0.11
APEX1-216ENST00000557159 NBPF10Q6P3W6 841 aaKnown RBP14.34□□□□□ -0.11
APEX1-216ENST00000557159 UBE3BQ7Z3V4 1068 aa14.34□□□□□ -0.11
APEX1-216ENST00000557159 NBPF15Q8N660 670 aa14.34□□□□□ -0.11
APEX1-216ENST00000557159 TRIML1Q8N9V2 468 aa14.34□□□□□ -0.11
APEX1-216ENST00000557159 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.34□□□□□ -0.11
APEX1-216ENST00000557159 ANKZF1Q9H8Y5 726 aa14.34□□□□□ -0.11
APEX1-216ENST00000557159 VIPAS39Q9H9C1 493 aa14.34□□□□□ -0.11
APEX1-216ENST00000557159 HOOK1Q9UJC3 728 aaKnown RBP14.34□□□□□ -0.11
APEX1-216ENST00000557159 TRIM66O15016 1216 aa14.33□□□□□ -0.12
APEX1-216ENST00000557159 WDHD1O75717 1129 aaPredicted RBP14.33□□□□□ -0.12
APEX1-216ENST00000557159 FECHP22830 423 aa14.33□□□□□ -0.12
APEX1-216ENST00000557159 CASP7P55210 303 aa14.33□□□□□ -0.12
APEX1-216ENST00000557159 TFCP2Q12800 502 aa14.33□□□□□ -0.12
APEX1-216ENST00000557159 ITPK1Q13572 414 aa14.33□□□□□ -0.12
APEX1-216ENST00000557159 PTPAQ15257 358 aa14.33□□□□□ -0.12
APEX1-216ENST00000557159 MLKLQ8NB16 471 aa14.33□□□□□ -0.12
APEX1-216ENST00000557159 FANCLQ9NW38 375 aa14.33□□□□□ -0.12
APEX1-216ENST00000557159 ZNF831Q5JPB2 1677 aa14.33□□□□□ -0.12
APEX1-216ENST00000557159 RGPD3A6NKT7 1758 aaPredicted RBP14.32□□□□□ -0.12
APEX1-216ENST00000557159 RGPD4Q7Z3J3 1758 aa14.32□□□□□ -0.12
APEX1-216ENST00000557159 TMEM232C9JQI7 657 aa14.32□□□□□ -0.12
APEX1-216ENST00000557159 CORO7P57737 925 aa14.32□□□□□ -0.12
APEX1-216ENST00000557159 EZH2Q15910 746 aaKnown RBP14.32□□□□□ -0.12
APEX1-216ENST00000557159 CCDC102BQ68D86 513 aa14.32□□□□□ -0.12
APEX1-216ENST00000557159 DNAJC10Q8IXB1 793 aa14.32□□□□□ -0.12
APEX1-216ENST00000557159 CCDC12Q8WUD4 166 aaPredicted RBP14.32□□□□□ -0.12
APEX1-216ENST00000557159 PPM1EQ8WY54 764 aa14.32□□□□□ -0.12
APEX1-216ENST00000557159 EPC1Q9H2F5 836 aa14.32□□□□□ -0.12
APEX1-216ENST00000557159 MYO1AQ9UBC5 1043 aa14.32□□□□□ -0.12
APEX1-216ENST00000557159 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.31□□□□□ -0.12
APEX1-216ENST00000557159 FOSBP53539 338 aa14.31□□□□□ -0.12
APEX1-216ENST00000557159 TRIM28Q13263 835 aaKnown RBP14.31□□□□□ -0.12
APEX1-216ENST00000557159 EPHA10Q5JZY3 1008 aa14.31□□□□□ -0.12
APEX1-216ENST00000557159 SHC4Q6S5L8 630 aa14.31□□□□□ -0.12
APEX1-216ENST00000557159 TOGARAM2Q6ZUX3 1019 aa14.31□□□□□ -0.12
APEX1-216ENST00000557159 DBNDD2Q9BQY9 259 aa14.31□□□□□ -0.12
APEX1-216ENST00000557159 FAM107BQ9H098 131 aa14.31□□□□□ -0.12
APEX1-216ENST00000557159 PDE11AQ9HCR9 933 aa14.31□□□□□ -0.12
APEX1-216ENST00000557159 PAG1Q9NWQ8 432 aa14.31□□□□□ -0.12
APEX1-216ENST00000557159 HPS5Q9UPZ3 1129 aa14.31□□□□□ -0.12
APEX1-216ENST00000557159 NUP188Q5SRE5 1749 aa14.31□□□□□ -0.12
APEX1-216ENST00000557159 ATP5J2-PTCD1G3V325 749 aa14.31□□□□□ -0.12
APEX1-216ENST00000557159 STARD3NLO95772 234 aa14.31□□□□□ -0.12
APEX1-216ENST00000557159 POLR3DP05423 398 aaPredicted RBP14.31□□□□□ -0.12
APEX1-216ENST00000557159 CYP19A1P11511 503 aaPredicted RBP14.31□□□□□ -0.12
APEX1-216ENST00000557159 GUCY2CP25092 1073 aa14.31□□□□□ -0.12
APEX1-216ENST00000557159 AARSP49588 968 aaKnown RBP eCLIP14.31□□□□□ -0.127e-6■□□□□ 11.2
APEX1-216ENST00000557159 MDM2Q00987 491 aaPredicted RBP14.31□□□□□ -0.12
APEX1-216ENST00000557159 NR1I3Q14994 352 aa14.31□□□□□ -0.12
APEX1-216ENST00000557159 WHAMMP3Q1A5X7 153 aa14.31□□□□□ -0.12
APEX1-216ENST00000557159 TTC31Q49AM3 519 aaPredicted RBP14.31□□□□□ -0.12
APEX1-216ENST00000557159 WDR93Q6P2C0 686 aa14.31□□□□□ -0.12
APEX1-216ENST00000557159 METTL16Q86W50 562 aaKnown RBP14.31□□□□□ -0.12
APEX1-216ENST00000557159 SUGP1Q8IWZ8 645 aaKnown RBP14.31□□□□□ -0.12
APEX1-216ENST00000557159 CCDC51Q96ER9 411 aa14.31□□□□□ -0.12
APEX1-216ENST00000557159 VPS18Q9P253 973 aa14.31□□□□□ -0.12
APEX1-216ENST00000557159 FBXO3Q9UK99 471 aa14.31□□□□□ -0.12
APEX1-216ENST00000557159 CICQ96RK0 1608 aaPredicted RBP14.3□□□□□ -0.12
APEX1-216ENST00000557159 A0A1B0GTH6 734 aa14.3□□□□□ -0.12
APEX1-216ENST00000557159 KIF28PB7ZC32 967 aa14.3□□□□□ -0.12
APEX1-216ENST00000557159 RNF113AO15541 343 aaKnown RBP14.3□□□□□ -0.12
APEX1-216ENST00000557159 KIF5CO60282 957 aa14.3□□□□□ -0.12
APEX1-216ENST00000557159 HMGB2P26583 209 aaKnown RBP14.3□□□□□ -0.12
APEX1-216ENST00000557159 ERCC5P28715 1186 aaPredicted RBP14.3□□□□□ -0.12
APEX1-216ENST00000557159 DDX46Q7L014 1031 aaKnown RBP14.3□□□□□ -0.12
APEX1-216ENST00000557159 RASGRP2Q7LDG7 609 aa14.3□□□□□ -0.12
APEX1-216ENST00000557159 MB21D2Q8IYB1 491 aaPredicted RBP14.3□□□□□ -0.12
APEX1-216ENST00000557159 PLCD3Q8N3E9 789 aa14.3□□□□□ -0.12
APEX1-216ENST00000557159 KLHDC4Q8TBB5 520 aa14.3□□□□□ -0.12
APEX1-216ENST00000557159 MAP3K14Q99558 947 aa14.3□□□□□ -0.12
APEX1-216ENST00000557159 ADGRG1Q9Y653 693 aa14.3□□□□□ -0.12
APEX1-216ENST00000557159 EIF3CLB5ME19 914 aaKnown RBP14.29□□□□□ -0.12
APEX1-216ENST00000557159 SARSP49591 514 aaKnown RBP14.29□□□□□ -0.12
APEX1-216ENST00000557159 FOXO4P98177 505 aa14.29□□□□□ -0.12
APEX1-216ENST00000557159 EFCAB13Q8IY85 973 aa14.29□□□□□ -0.12
APEX1-216ENST00000557159 LINC00116Q8NCU8 138 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms