RNA–Protein interactions for RNA: ENST00000557084.1

SYNE2-226, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-226ENST00000557084 ATRNL1Q5VV63 1379 aa14.47□□□□□ -0.09
SYNE2-226ENST00000557084 OTOFQ9HC10 1997 aa14.46□□□□□ -0.09
SYNE2-226ENST00000557084 HLA-DOAP06340 250 aa14.46□□□□□ -0.09
SYNE2-226ENST00000557084 ATP5JP18859 108 aa14.46□□□□□ -0.09
SYNE2-226ENST00000557084 DYNLL1P63167 89 aaKnown RBP14.46□□□□□ -0.09
SYNE2-226ENST00000557084 CRBNQ96SW2 442 aa14.46□□□□□ -0.09
SYNE2-226ENST00000557084 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.46□□□□□ -0.09
SYNE2-226ENST00000557084 SAP30BPQ9UHR5 308 aaKnown RBP14.46□□□□□ -0.09
SYNE2-226ENST00000557084 HERC5Q9UII4 1024 aaKnown RBP14.46□□□□□ -0.09
SYNE2-226ENST00000557084 FLT1P17948 1338 aa14.45□□□□□ -0.1
SYNE2-226ENST00000557084 MAGEB6P1A0A0J9YX57 407 aa14.45□□□□□ -0.1
SYNE2-226ENST00000557084 FAM196BA6NMK8 535 aa14.45□□□□□ -0.1
SYNE2-226ENST00000557084 PDE6AP16499 860 aa14.45□□□□□ -0.1
SYNE2-226ENST00000557084 PTPRAP18433 802 aa14.45□□□□□ -0.1
SYNE2-226ENST00000557084 MAP3K10Q02779 954 aa14.45□□□□□ -0.1
SYNE2-226ENST00000557084 PKN2Q16513 984 aaKnown RBP14.45□□□□□ -0.1
SYNE2-226ENST00000557084 FAM43AQ8N2R8 423 aa14.45□□□□□ -0.1
SYNE2-226ENST00000557084 PALD1Q9ULE6 856 aa14.45□□□□□ -0.1
SYNE2-226ENST00000557084 PCDHB15Q9Y5E8 787 aa14.45□□□□□ -0.1
SYNE2-226ENST00000557084 BTBD19C9JJ37 291 aa14.44□□□□□ -0.1
SYNE2-226ENST00000557084 CXCL11O14625 94 aa14.44□□□□□ -0.1
SYNE2-226ENST00000557084 SLURP2P0DP57 97 aa14.44□□□□□ -0.1
SYNE2-226ENST00000557084 ARHGEF6Q15052 776 aa14.44□□□□□ -0.1
SYNE2-226ENST00000557084 FOXP4Q8IVH2 680 aaPredicted RBP14.44□□□□□ -0.1
SYNE2-226ENST00000557084 ERO1AQ96HE7 468 aa14.44□□□□□ -0.1
SYNE2-226ENST00000557084 HAUS7Q99871 368 aa14.44□□□□□ -0.1
SYNE2-226ENST00000557084 CRNKL1Q9BZJ0 848 aaKnown RBP14.44□□□□□ -0.1
SYNE2-226ENST00000557084 ZCCHC17Q9NP64 241 aaKnown RBP14.44□□□□□ -0.1
SYNE2-226ENST00000557084 ECHDC1Q9NTX5 307 aa14.44□□□□□ -0.1
SYNE2-226ENST00000557084 KCNH4Q9UQ05 1017 aa14.44□□□□□ -0.1
SYNE2-226ENST00000557084 COL2A1P02458 1487 aaPredicted RBP14.44□□□□□ -0.1
SYNE2-226ENST00000557084 ZNF532Q9HCE3 1301 aa14.43□□□□□ -0.1
SYNE2-226ENST00000557084 TRIM75PA6NK02 468 aa14.43□□□□□ -0.1
SYNE2-226ENST00000557084 SP3Q02447 781 aa14.43□□□□□ -0.1
SYNE2-226ENST00000557084 SLC4A8Q2Y0W8 1093 aa14.43□□□□□ -0.1
SYNE2-226ENST00000557084 ZSCAN25Q6NSZ9 544 aa14.43□□□□□ -0.1
SYNE2-226ENST00000557084 GADL1Q6ZQY3 521 aa14.43□□□□□ -0.1
SYNE2-226ENST00000557084 FASTKD5Q7L8L6 764 aaKnown RBP14.43□□□□□ -0.1
SYNE2-226ENST00000557084 EDC3Q96F86 508 aaKnown RBP14.43□□□□□ -0.1
SYNE2-226ENST00000557084 MAST2Q6P0Q8 1798 aa14.42□□□□□ -0.1
SYNE2-226ENST00000557084 PDHXO00330 501 aa14.42□□□□□ -0.1
SYNE2-226ENST00000557084 CAP2P40123 477 aa14.42□□□□□ -0.1
SYNE2-226ENST00000557084 KIF22Q14807 665 aa14.42□□□□□ -0.1
SYNE2-226ENST00000557084 ANKRD23Q86SG2 305 aa14.42□□□□□ -0.1
SYNE2-226ENST00000557084 TTC6Q86TZ1 520 aa14.42□□□□□ -0.1
SYNE2-226ENST00000557084 TRIM17Q9Y577 477 aa14.42□□□□□ -0.1
SYNE2-226ENST00000557084 DOCK2Q92608 1830 aa14.41□□□□□ -0.1
SYNE2-226ENST00000557084 POLR3DP05423 398 aaPredicted RBP14.41□□□□□ -0.1
SYNE2-226ENST00000557084 AAMPQ13685 434 aa14.41□□□□□ -0.1
SYNE2-226ENST00000557084 CD99L2Q8TCZ2 262 aa14.41□□□□□ -0.1
SYNE2-226ENST00000557084 PARK7Q99497 189 aaKnown RBP14.41□□□□□ -0.1
SYNE2-226ENST00000557084 EFCC1Q9HA90 598 aa14.41□□□□□ -0.1
SYNE2-226ENST00000557084 AFG3L2Q9Y4W6 797 aa14.41□□□□□ -0.1
SYNE2-226ENST00000557084 A0A0G2JLL6 359 aaPredicted RBP14.4□□□□□ -0.1
SYNE2-226ENST00000557084 USP17L5A8MUK1 530 aa14.4□□□□□ -0.1
SYNE2-226ENST00000557084 ERC2O15083 957 aa14.4□□□□□ -0.1
SYNE2-226ENST00000557084 TLR2O60603 784 aa14.4□□□□□ -0.1
SYNE2-226ENST00000557084 ASNSP08243 561 aa14.4□□□□□ -0.1
SYNE2-226ENST00000557084 FBXO46Q6PJ61 603 aaPredicted RBP14.4□□□□□ -0.1
SYNE2-226ENST00000557084 PRRT2Q7Z6L0 340 aaPredicted RBP14.4□□□□□ -0.1
SYNE2-226ENST00000557084 DDRGK1Q96HY6 314 aa14.4□□□□□ -0.1
SYNE2-226ENST00000557084 RIOK1Q9BRS2 568 aaKnown RBP14.4□□□□□ -0.1
SYNE2-226ENST00000557084 TBC1D2Q9BYX2 928 aa14.4□□□□□ -0.1
SYNE2-226ENST00000557084 AS3MTQ9HBK9 375 aa14.4□□□□□ -0.1
SYNE2-226ENST00000557084 ADD2P35612 726 aa14.39□□□□□ -0.11
SYNE2-226ENST00000557084 SPP2Q13103 211 aa14.39□□□□□ -0.11
SYNE2-226ENST00000557084 ANKRD45Q5TZF3 282 aa14.39□□□□□ -0.11
SYNE2-226ENST00000557084 TSHZ3Q63HK5 1081 aa14.39□□□□□ -0.11
SYNE2-226ENST00000557084 CCDC84Q86UT8 332 aaPredicted RBP14.39□□□□□ -0.11
SYNE2-226ENST00000557084 AMOTL1Q8IY63 956 aa14.39□□□□□ -0.11
SYNE2-226ENST00000557084 ZNF280CQ8ND82 737 aa14.39□□□□□ -0.11
SYNE2-226ENST00000557084 MCM9Q9NXL9 1143 aa14.39□□□□□ -0.11
SYNE2-226ENST00000557084 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.39□□□□□ -0.11
SYNE2-226ENST00000557084 SERPINB13Q9UIV8 391 aa14.39□□□□□ -0.11
SYNE2-226ENST00000557084 MYO5AQ9Y4I1 1855 aaKnown RBP14.38□□□□□ -0.11
SYNE2-226ENST00000557084 TCRBV5S4A2TA0A5A2 114 aa14.38□□□□□ -0.11
SYNE2-226ENST00000557084 MBD4O95243 580 aa14.38□□□□□ -0.11
SYNE2-226ENST00000557084 GDF11O95390 407 aa14.38□□□□□ -0.11
SYNE2-226ENST00000557084 UBE3CQ15386 1083 aa14.38□□□□□ -0.11
SYNE2-226ENST00000557084 LRRFIP1Q32MZ4 808 aaKnown RBP14.38□□□□□ -0.11
SYNE2-226ENST00000557084 OTOP1Q7RTM1 612 aa14.38□□□□□ -0.11
SYNE2-226ENST00000557084 LCORLQ8N3X6 602 aa14.38□□□□□ -0.11
SYNE2-226ENST00000557084 SMCR8Q8TEV9 937 aaPredicted RBP14.38□□□□□ -0.11
SYNE2-226ENST00000557084 GCC1Q96CN9 775 aa14.38□□□□□ -0.11
SYNE2-226ENST00000557084 ARMT1Q9H993 441 aa14.38□□□□□ -0.11
SYNE2-226ENST00000557084 GINM1Q9NU53 330 aa14.38□□□□□ -0.11
SYNE2-226ENST00000557084 CPA4Q9UI42 421 aa14.38□□□□□ -0.11
SYNE2-226ENST00000557084 HPS5Q9UPZ3 1129 aa14.38□□□□□ -0.11
SYNE2-226ENST00000557084 HDAC1Q13547 482 aaPredicted RBP14.37□□□□□ -0.11
SYNE2-226ENST00000557084 MOGSQ13724 837 aa14.37□□□□□ -0.11
SYNE2-226ENST00000557084 RRP1BQ14684 758 aaKnown RBP14.37□□□□□ -0.11
SYNE2-226ENST00000557084 GPAT2Q6NUI2 795 aa14.37□□□□□ -0.11
SYNE2-226ENST00000557084 METTL16Q86W50 562 aaKnown RBP14.37□□□□□ -0.11
SYNE2-226ENST00000557084 EHD4Q9H223 541 aa14.37□□□□□ -0.11
SYNE2-226ENST00000557084 RWDD1Q9H446 243 aaPredicted RBP14.37□□□□□ -0.11
SYNE2-226ENST00000557084 TMOD4Q9NZQ9 345 aa14.37□□□□□ -0.11
SYNE2-226ENST00000557084 TTC41PQ6P2S7 1318 aa14.37□□□□□ -0.11
SYNE2-226ENST00000557084 GLRX3O76003 335 aaKnown RBP14.36□□□□□ -0.11
SYNE2-226ENST00000557084 ECM2O94769 699 aaPredicted RBP14.36□□□□□ -0.11
SYNE2-226ENST00000557084 CYP2C8P10632 490 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms