RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 MAP7Q14244 749 aa7.26□□□□□ -1.25
SRP54-211ENST00000556445 MAP1SQ66K74 1059 aaPredicted RBP7.26□□□□□ -1.25
SRP54-211ENST00000556445 MPRIPQ6WCQ1 1025 aa7.26□□□□□ -1.25
SRP54-211ENST00000556445 ZAR1Q86SH2 424 aa7.26□□□□□ -1.25
SRP54-211ENST00000556445 DHX37Q8IY37 1157 aaKnown RBP7.26□□□□□ -1.25
SRP54-211ENST00000556445 FBXL6Q8N531 539 aa7.26□□□□□ -1.25
SRP54-211ENST00000556445 GRIN3AQ8TCU5 1115 aa7.26□□□□□ -1.25
SRP54-211ENST00000556445 FANCD2OSQ96PS1 177 aa7.26□□□□□ -1.25
SRP54-211ENST00000556445 AK5Q9Y6K8 562 aa7.26□□□□□ -1.25
SRP54-211ENST00000556445 CCDC18Q5T9S5 1454 aa7.25□□□□□ -1.25
SRP54-211ENST00000556445 DYNC1LI2O43237 492 aaPredicted RBP7.25□□□□□ -1.25
SRP54-211ENST00000556445 EIF4BP23588 611 aaKnown RBP7.25□□□□□ -1.25
SRP54-211ENST00000556445 FBXO33Q7Z6M2 555 aa7.25□□□□□ -1.25
SRP54-211ENST00000556445 GPBAR1Q8TDU6 330 aa7.25□□□□□ -1.25
SRP54-211ENST00000556445 ATXN3LQ9H3M9 355 aa7.25□□□□□ -1.25
SRP54-211ENST00000556445 C1GALT1Q9NS00 363 aa7.25□□□□□ -1.25
SRP54-211ENST00000556445 HECW1Q76N89 1606 aa7.24□□□□□ -1.25
SRP54-211ENST00000556445 CCNB3Q8WWL7 1395 aa7.24□□□□□ -1.25
SRP54-211ENST00000556445 SPINK2P20155 84 aa7.24□□□□□ -1.25
SRP54-211ENST00000556445 FGD1P98174 961 aa7.24□□□□□ -1.25
SRP54-211ENST00000556445 ZC3H12AQ5D1E8 599 aaKnown RBP7.24□□□□□ -1.25
SRP54-211ENST00000556445 CBX8Q9HC52 389 aa7.24□□□□□ -1.25
SRP54-211ENST00000556445 PCMTD2Q9NV79 361 aa7.24□□□□□ -1.25
SRP54-211ENST00000556445 DAGLAQ9Y4D2 1042 aa7.24□□□□□ -1.25
SRP54-211ENST00000556445 CARMIL2Q6F5E8 1435 aa7.24□□□□□ -1.25
SRP54-211ENST00000556445 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.23□□□□□ -1.25
SRP54-211ENST00000556445 HOXA10P31260 410 aaPredicted RBP7.23□□□□□ -1.25
SRP54-211ENST00000556445 HNRNPUQ00839 825 aaKnown RBP eCLIP7.23□□□□□ -1.25
SRP54-211ENST00000556445 INTS5Q6P9B9 1019 aaKnown RBP7.23□□□□□ -1.25
SRP54-211ENST00000556445 SV2BQ7L1I2 683 aa7.23□□□□□ -1.25
SRP54-211ENST00000556445 TBC1D32Q96NH3 1257 aa7.23□□□□□ -1.25
SRP54-211ENST00000556445 POLR3GLQ9BT43 218 aa7.23□□□□□ -1.25
SRP54-211ENST00000556445 ATG3Q9NT62 314 aa7.23□□□□□ -1.25
SRP54-211ENST00000556445 PIM2Q9P1W9 311 aa7.23□□□□□ -1.25
SRP54-211ENST00000556445 PARP2Q9UGN5 583 aa7.23□□□□□ -1.25
SRP54-211ENST00000556445 TTF2Q9UNY4 1162 aaKnown RBP7.23□□□□□ -1.25
SRP54-211ENST00000556445 SAMM50Q9Y512 469 aa7.23□□□□□ -1.25
SRP54-211ENST00000556445 MTUS2Q5JR59 1369 aa7.22□□□□□ -1.25
SRP54-211ENST00000556445 NUP160Q12769 1436 aa7.22□□□□□ -1.25
SRP54-211ENST00000556445 FAM170BA6NMN3 283 aa7.22□□□□□ -1.25
SRP54-211ENST00000556445 PPM1GO15355 546 aaPredicted RBP7.22□□□□□ -1.25
SRP54-211ENST00000556445 TRIM37O94972 964 aa7.22□□□□□ -1.25
SRP54-211ENST00000556445 NEFMP07197 916 aa7.22□□□□□ -1.25
SRP54-211ENST00000556445 CANXP27824 592 aaKnown RBP7.22□□□□□ -1.25
SRP54-211ENST00000556445 GRIK1P39086 918 aa7.22□□□□□ -1.25
SRP54-211ENST00000556445 TTLL4Q14679 1199 aa7.22□□□□□ -1.25
SRP54-211ENST00000556445 CPSF6Q16630 551 aaKnown RBP eCLIP7.22□□□□□ -1.25
SRP54-211ENST00000556445 PCNX4Q63HM2 1172 aa7.22□□□□□ -1.25
SRP54-211ENST00000556445 LLGL2Q6P1M3 1020 aa7.22□□□□□ -1.25
SRP54-211ENST00000556445 GIMAP7Q8NHV1 300 aa7.22□□□□□ -1.25
SRP54-211ENST00000556445 OSBPL1AQ9BXW6 950 aa7.22□□□□□ -1.25
SRP54-211ENST00000556445 LEMD3Q9Y2U8 911 aa7.22□□□□□ -1.25
SRP54-211ENST00000556445 CLSPNQ9HAW4 1339 aa7.22□□□□□ -1.25
SRP54-211ENST00000556445 EHBP1L1Q8N3D4 1523 aa7.22□□□□□ -1.25
SRP54-211ENST00000556445 KIAA0556O60303 1618 aa7.21□□□□□ -1.26
SRP54-211ENST00000556445 RBM47A0AV96 593 aaKnown RBP7.21□□□□□ -1.26
SRP54-211ENST00000556445 ERVK-24P63145 666 aa7.21□□□□□ -1.26
SRP54-211ENST00000556445 DAB2P98082 770 aa7.21□□□□□ -1.26
SRP54-211ENST00000556445 TAGLNQ01995 201 aaKnown RBP7.21□□□□□ -1.26
SRP54-211ENST00000556445 SCARA3Q6AZY7 606 aa7.21□□□□□ -1.26
SRP54-211ENST00000556445 DTX1Q86Y01 620 aa7.21□□□□□ -1.26
SRP54-211ENST00000556445 METTL22Q9BUU2 404 aaPredicted RBP7.21□□□□□ -1.26
SRP54-211ENST00000556445 PIDD1Q9HB75 910 aa7.21□□□□□ -1.26
SRP54-211ENST00000556445 LGR6Q9HBX8 967 aa7.21□□□□□ -1.26
SRP54-211ENST00000556445 ADAMTS4O75173 837 aa7.2□□□□□ -1.26
SRP54-211ENST00000556445 HCLS1P14317 486 aaPredicted RBP7.2□□□□□ -1.26
SRP54-211ENST00000556445 FOSL1P15407 271 aa7.2□□□□□ -1.26
SRP54-211ENST00000556445 LRRC14Q15048 493 aa7.2□□□□□ -1.26
SRP54-211ENST00000556445 MSMPQ1L6U9 139 aa7.2□□□□□ -1.26
SRP54-211ENST00000556445 NBPF11Q86T75 865 aa7.2□□□□□ -1.26
SRP54-211ENST00000556445 SMYD4Q8IYR2 804 aaPredicted RBP7.2□□□□□ -1.26
SRP54-211ENST00000556445 ACSBG1Q96GR2 724 aa7.2□□□□□ -1.26
SRP54-211ENST00000556445 CYP8B1Q9UNU6 501 aa7.2□□□□□ -1.26
SRP54-211ENST00000556445 SUPT6HQ7KZ85 1726 aaKnown RBP7.2□□□□□ -1.26
SRP54-211ENST00000556445 DISP1Q96F81 1524 aa7.19□□□□□ -1.26
SRP54-211ENST00000556445 NTF4P34130 210 aa7.19□□□□□ -1.26
SRP54-211ENST00000556445 PTPN11Q06124 597 aaPredicted RBP7.19□□□□□ -1.26
SRP54-211ENST00000556445 RING1Q06587 406 aa7.19□□□□□ -1.26
SRP54-211ENST00000556445 PSMD2Q13200 908 aa7.19□□□□□ -1.26
SRP54-211ENST00000556445 MEI1Q5TIA1 1274 aa7.19□□□□□ -1.26
SRP54-211ENST00000556445 ZNF765Q7L2R6 523 aa7.19□□□□□ -1.26
SRP54-211ENST00000556445 TMC4Q7Z404 712 aa7.19□□□□□ -1.26
SRP54-211ENST00000556445 RNF214Q8ND24 703 aa7.19□□□□□ -1.26
SRP54-211ENST00000556445 GAL3ST3Q96A11 431 aa7.19□□□□□ -1.26
SRP54-211ENST00000556445 ISL2Q96A47 359 aa7.19□□□□□ -1.26
SRP54-211ENST00000556445 FAM161BQ96MY7 647 aa7.19□□□□□ -1.26
SRP54-211ENST00000556445 CEP170Q5SW79 1584 aa7.19□□□□□ -1.26
SRP54-211ENST00000556445 CTSHP09668 335 aa7.18□□□□□ -1.26
SRP54-211ENST00000556445 ERCC3P19447 782 aa7.18□□□□□ -1.26
SRP54-211ENST00000556445 CYP27A1Q02318 531 aa7.18□□□□□ -1.26
SRP54-211ENST00000556445 CDK5R2Q13319 367 aa7.18□□□□□ -1.26
SRP54-211ENST00000556445 CCDC85BQ15834 202 aaPredicted RBP7.18□□□□□ -1.26
SRP54-211ENST00000556445 TTBK2Q6IQ55 1244 aa7.18□□□□□ -1.26
SRP54-211ENST00000556445 OGFOD3Q6PK18 319 aa7.18□□□□□ -1.26
SRP54-211ENST00000556445 PCOLCE2Q9UKZ9 415 aa7.18□□□□□ -1.26
SRP54-211ENST00000556445 CSADQ9Y600 493 aa7.18□□□□□ -1.26
SRP54-211ENST00000556445 EPRSP07814 1512 aaKnown RBP7.17□□□□□ -1.26
SRP54-211ENST00000556445 RAPGEF6Q8TEU7 1601 aa7.17□□□□□ -1.26
SRP54-211ENST00000556445 DCDC2CA8MYV0 355 aa7.17□□□□□ -1.26
SRP54-211ENST00000556445 RNGTTO60942 597 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms