RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 SLC5A1P13866 664 aa13.4□□□□□ -0.26
SYNE2-221ENST00000556342 GRK4P32298 578 aa13.4□□□□□ -0.26
SYNE2-221ENST00000556342 RFX5P48382 616 aaPredicted RBP13.4□□□□□ -0.26
SYNE2-221ENST00000556342 MOGSQ13724 837 aa13.4□□□□□ -0.26
SYNE2-221ENST00000556342 NOL9Q5SY16 702 aaKnown RBP13.4□□□□□ -0.26
SYNE2-221ENST00000556342 CDC42EP5Q6NZY7 148 aa13.4□□□□□ -0.26
SYNE2-221ENST00000556342 ZNF454Q8N9F8 522 aa13.4□□□□□ -0.26
SYNE2-221ENST00000556342 LPIN2Q92539 896 aa13.4□□□□□ -0.26
SYNE2-221ENST00000556342 USP44Q9H0E7 712 aa13.4□□□□□ -0.26
SYNE2-221ENST00000556342 ARHGAP33O14559 1287 aa13.39□□□□□ -0.27
SYNE2-221ENST00000556342 PRDX5P30044 214 aa13.39□□□□□ -0.27
SYNE2-221ENST00000556342 ZEB1P37275 1124 aaPredicted RBP13.39□□□□□ -0.27
SYNE2-221ENST00000556342 NFIAQ12857 509 aa13.39□□□□□ -0.27
SYNE2-221ENST00000556342 DIXDC1Q155Q3 683 aa13.39□□□□□ -0.27
SYNE2-221ENST00000556342 NKX2-3Q8TAU0 364 aa13.39□□□□□ -0.27
SYNE2-221ENST00000556342 RAET1EQ8TD07 263 aa13.39□□□□□ -0.27
SYNE2-221ENST00000556342 MYPNQ86TC9 1320 aa13.39□□□□□ -0.27
SYNE2-221ENST00000556342 ZNF521Q96K83 1311 aa13.39□□□□□ -0.27
SYNE2-221ENST00000556342 GJA8P48165 433 aa13.38□□□□□ -0.27
SYNE2-221ENST00000556342 LSM11P83369 360 aaKnown RBP eCLIP13.38□□□□□ -0.27
SYNE2-221ENST00000556342 FAM9BQ8IZU0 186 aa13.38□□□□□ -0.27
SYNE2-221ENST00000556342 PARK7Q99497 189 aaKnown RBP13.38□□□□□ -0.27
SYNE2-221ENST00000556342 FAM198AQ9UFP1 575 aa13.38□□□□□ -0.27
SYNE2-221ENST00000556342 ARIH1Q9Y4X5 557 aaPredicted RBP13.38□□□□□ -0.27
SYNE2-221ENST00000556342 CXCL11O14625 94 aa13.37□□□□□ -0.27
SYNE2-221ENST00000556342 GJB1P08034 283 aa13.37□□□□□ -0.27
SYNE2-221ENST00000556342 BCRP11274 1271 aa13.37□□□□□ -0.27
SYNE2-221ENST00000556342 CCL5P13501 91 aa13.37□□□□□ -0.27
SYNE2-221ENST00000556342 PRKCZQ05513 592 aa13.37□□□□□ -0.27
SYNE2-221ENST00000556342 GPAT2Q6NUI2 795 aa13.37□□□□□ -0.27
SYNE2-221ENST00000556342 ATG9AQ7Z3C6 839 aa13.37□□□□□ -0.27
SYNE2-221ENST00000556342 UBE2Q1Q7Z7E8 422 aa13.37□□□□□ -0.27
SYNE2-221ENST00000556342 DPF3Q92784 378 aa13.37□□□□□ -0.27
SYNE2-221ENST00000556342 USP40Q9NVE5 1235 aa13.37□□□□□ -0.27
SYNE2-221ENST00000556342 SZT2Q5T011 3432 aa13.37□□□□□ -0.27
SYNE2-221ENST00000556342 ATRNL1Q5VV63 1379 aa13.36□□□□□ -0.27
SYNE2-221ENST00000556342 LDHBP07195 334 aaKnown RBP13.36□□□□□ -0.27
SYNE2-221ENST00000556342 CYP2C8P10632 490 aa13.36□□□□□ -0.27
SYNE2-221ENST00000556342 FCGRTP55899 365 aa13.36□□□□□ -0.27
SYNE2-221ENST00000556342 UBXN2AP68543 259 aa13.36□□□□□ -0.27
SYNE2-221ENST00000556342 ATP2B3Q16720 1220 aa13.36□□□□□ -0.27
SYNE2-221ENST00000556342 SSH1Q8WYL5 1049 aa13.36□□□□□ -0.27
SYNE2-221ENST00000556342 RNF208Q9H0X6 261 aa13.36□□□□□ -0.27
SYNE2-221ENST00000556342 BIN2Q9UBW5 565 aaPredicted RBP13.36□□□□□ -0.27
SYNE2-221ENST00000556342 SALL1Q9NSC2 1324 aa13.36□□□□□ -0.27
SYNE2-221ENST00000556342 PHF20L1A8MW92 1017 aa13.35□□□□□ -0.27
SYNE2-221ENST00000556342 MMRN1Q13201 1228 aa13.35□□□□□ -0.27
SYNE2-221ENST00000556342 ZFPM1Q8IX07 1006 aa13.35□□□□□ -0.27
SYNE2-221ENST00000556342 SCYL3Q8IZE3 742 aa13.35□□□□□ -0.27
SYNE2-221ENST00000556342 HTATIP2Q9BUP3 242 aa13.35□□□□□ -0.27
SYNE2-221ENST00000556342 GNL3LQ9NVN8 582 aaKnown RBP13.35□□□□□ -0.27
SYNE2-221ENST00000556342 RBM27Q9P2N5 1060 aaKnown RBP13.35□□□□□ -0.27
SYNE2-221ENST00000556342 A0A0G2JLL6 359 aaPredicted RBP13.34□□□□□ -0.27
SYNE2-221ENST00000556342 SEMA3EO15041 775 aa13.34□□□□□ -0.27
SYNE2-221ENST00000556342 CIAO1O76071 339 aa13.34□□□□□ -0.27
SYNE2-221ENST00000556342 PHKA1P46020 1223 aa13.34□□□□□ -0.27
SYNE2-221ENST00000556342 RGS3P49796 1198 aa13.34□□□□□ -0.27
SYNE2-221ENST00000556342 FASTKD5Q7L8L6 764 aaKnown RBP13.34□□□□□ -0.27
SYNE2-221ENST00000556342 PRRT2Q7Z6L0 340 aaPredicted RBP13.34□□□□□ -0.27
SYNE2-221ENST00000556342 U2AF1L4Q8WU68 220 aaKnown RBP13.34□□□□□ -0.27
SYNE2-221ENST00000556342 IDI2Q9BXS1 227 aa13.34□□□□□ -0.27
SYNE2-221ENST00000556342 SIL1Q9H173 461 aa13.34□□□□□ -0.27
SYNE2-221ENST00000556342 PICK1Q9NRD5 415 aa13.34□□□□□ -0.27
SYNE2-221ENST00000556342 CEP126Q9P2H0 1117 aa13.34□□□□□ -0.27
SYNE2-221ENST00000556342 DENND2AQ9ULE3 1009 aa13.34□□□□□ -0.27
SYNE2-221ENST00000556342 GABRQQ9UN88 632 aa13.34□□□□□ -0.27
SYNE2-221ENST00000556342 ZHX2Q9Y6X8 837 aa13.34□□□□□ -0.27
SYNE2-221ENST00000556342 RFX7Q2KHR2 1363 aa13.33□□□□□ -0.27
SYNE2-221ENST00000556342 ENTPD3O75355 529 aa13.33□□□□□ -0.28
SYNE2-221ENST00000556342 FARP2O94887 1054 aaPredicted RBP13.33□□□□□ -0.28
SYNE2-221ENST00000556342 PTPRAP18433 802 aa13.33□□□□□ -0.28
SYNE2-221ENST00000556342 UNC93B1Q9H1C4 597 aa13.33□□□□□ -0.28
SYNE2-221ENST00000556342 PRO3102Q9H379 93 aa13.33□□□□□ -0.28
SYNE2-221ENST00000556342 GAKO14976 1311 aa13.33□□□□□ -0.28
SYNE2-221ENST00000556342 SPDYE16A6NNV3 312 aaPredicted RBP13.32□□□□□ -0.28
SYNE2-221ENST00000556342 E9PSI1 815 aa13.32□□□□□ -0.28
SYNE2-221ENST00000556342 UBTFL1P0CB47 393 aaPredicted RBP13.32□□□□□ -0.28
SYNE2-221ENST00000556342 FLT3LGP49771 235 aa13.32□□□□□ -0.28
SYNE2-221ENST00000556342 GADL1Q6ZQY3 521 aa13.32□□□□□ -0.28
SYNE2-221ENST00000556342 SH3BP5LQ7L8J4 393 aa13.32□□□□□ -0.28
SYNE2-221ENST00000556342 ZSCAN29Q8IWY8 852 aaPredicted RBP13.32□□□□□ -0.28
SYNE2-221ENST00000556342 ZDHHC16Q969W1 377 aa13.32□□□□□ -0.28
SYNE2-221ENST00000556342 SLC45A1Q9Y2W3 748 aa13.32□□□□□ -0.28
SYNE2-221ENST00000556342 AFG3L2Q9Y4W6 797 aa13.32□□□□□ -0.28
SYNE2-221ENST00000556342 NR2E3Q9Y5X4 410 aa13.32□□□□□ -0.28
SYNE2-221ENST00000556342 MYH13Q9UKX3 1938 aa13.31□□□□□ -0.28
SYNE2-221ENST00000556342 DDTLA6NHG4 134 aaPredicted RBP13.31□□□□□ -0.28
SYNE2-221ENST00000556342 ADCY3O60266 1144 aa13.31□□□□□ -0.28
SYNE2-221ENST00000556342 SGPL1O95470 568 aa13.31□□□□□ -0.28
SYNE2-221ENST00000556342 INHAP05111 366 aa13.31□□□□□ -0.28
SYNE2-221ENST00000556342 SLURP2P0DP57 97 aa13.31□□□□□ -0.28
SYNE2-221ENST00000556342 IL15P40933 162 aaPredicted RBP13.31□□□□□ -0.28
SYNE2-221ENST00000556342 MAP3K10Q02779 954 aa13.31□□□□□ -0.28
SYNE2-221ENST00000556342 ALDH1L2Q3SY69 923 aa13.31□□□□□ -0.28
SYNE2-221ENST00000556342 CCDC102BQ68D86 513 aa13.31□□□□□ -0.28
SYNE2-221ENST00000556342 DZIP1Q86YF9 867 aaKnown RBP13.31□□□□□ -0.28
SYNE2-221ENST00000556342 ZGPATQ8N5A5 531 aaKnown RBP13.31□□□□□ -0.28
SYNE2-221ENST00000556342 SMCR8Q8TEV9 937 aaPredicted RBP13.31□□□□□ -0.28
SYNE2-221ENST00000556342 DDX4Q9NQI0 724 aaKnown RBP13.31□□□□□ -0.28
SYNE2-221ENST00000556342 LRRFIP2Q9Y608 721 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms