RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.99	□□□□□ -0.17
TMPO-212	ENST00000556029	ANKRD7	Q92527	254 aa		13.99	□□□□□ -0.17
TMPO-212	ENST00000556029	NUP88	Q99567	741 aa	Predicted RBP	13.99	□□□□□ -0.17
TMPO-212	ENST00000556029	UBA5	Q9GZZ9	404 aa		13.99	□□□□□ -0.17
TMPO-212	ENST00000556029	PFKFB1	P16118	471 aa		13.99	□□□□□ -0.17
TMPO-212	ENST00000556029	CRKL	P46109	303 aa	Known RBP	13.99	□□□□□ -0.17
TMPO-212	ENST00000556029	NLRP12	P59046	1061 aa		13.99	□□□□□ -0.17
TMPO-212	ENST00000556029	HLF	Q16534	295 aa		13.99	□□□□□ -0.17
TMPO-212	ENST00000556029	ILDR1	Q86SU0	546 aa	Predicted RBP	13.99	□□□□□ -0.17
TMPO-212	ENST00000556029	FEZ1	Q99689	392 aa		13.99	□□□□□ -0.17
TMPO-212	ENST00000556029	DNAI1	Q9UI46	699 aa		13.99	□□□□□ -0.17
TMPO-212	ENST00000556029	CASQ1	P31415	396 aa		13.98	□□□□□ -0.17
TMPO-212	ENST00000556029	SCARF1	Q14162	830 aa		13.98	□□□□□ -0.17
TMPO-212	ENST00000556029	TRAPPC3L	Q5T215	181 aa		13.98	□□□□□ -0.17
TMPO-212	ENST00000556029	ZNF444	Q8N0Y2	327 aa	Predicted RBP	13.98	□□□□□ -0.17
TMPO-212	ENST00000556029		B4E1Z4	1266 aa		13.98	□□□□□ -0.17
TMPO-212	ENST00000556029	TDRD12	Q587J7	1177 aa	Known RBP	13.98	□□□□□ -0.17
TMPO-212	ENST00000556029	LUC7L	Q9NQ29	371 aa	Known RBP	13.98	□□□□□ -0.17
TMPO-212	ENST00000556029	IMPACT	Q9P2X3	320 aa		13.98	□□□□□ -0.17
TMPO-212	ENST00000556029	ANGEL1	Q9UNK9	670 aa	Known RBP	13.98	□□□□□ -0.17
TMPO-212	ENST00000556029	IDE	P14735	1019 aa		13.98	□□□□□ -0.17
TMPO-212	ENST00000556029	HLTF	Q14527	1009 aa	Known RBP eCLIP	13.98	□□□□□ -0.17
TMPO-212	ENST00000556029	CTCFL	Q8NI51	663 aa	Predicted RBP	13.98	□□□□□ -0.17
TMPO-212	ENST00000556029	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.98	□□□□□ -0.17
TMPO-212	ENST00000556029	SEC31B	Q9NQW1	1179 aa		13.98	□□□□□ -0.17
TMPO-212	ENST00000556029	SALL1	Q9NSC2	1324 aa		13.98	□□□□□ -0.17
TMPO-212	ENST00000556029	ZSCAN12	O43309	604 aa		13.98	□□□□□ -0.17
TMPO-212	ENST00000556029	CTSW	P56202	376 aa		13.98	□□□□□ -0.17
TMPO-212	ENST00000556029	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.98	□□□□□ -0.17
TMPO-212	ENST00000556029	MB21D2	Q8IYB1	491 aa	Predicted RBP	13.98	□□□□□ -0.17
TMPO-212	ENST00000556029	PHKB	Q93100	1093 aa		13.98	□□□□□ -0.17
TMPO-212	ENST00000556029	ZBTB43	O43298	467 aa		13.97	□□□□□ -0.17
TMPO-212	ENST00000556029	KIF23	Q02241	960 aa	Predicted RBP	13.97	□□□□□ -0.17
TMPO-212	ENST00000556029	PPARD	Q03181	441 aa		13.97	□□□□□ -0.17
TMPO-212	ENST00000556029	DYDC1	Q8WWB3	177 aa		13.97	□□□□□ -0.17
TMPO-212	ENST00000556029	TAF4B	Q92750	862 aa		13.97	□□□□□ -0.17
TMPO-212	ENST00000556029	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.97	□□□□□ -0.17
TMPO-212	ENST00000556029	ZNF215	Q9UL58	517 aa	Predicted RBP	13.97	□□□□□ -0.17
TMPO-212	ENST00000556029	RBM6	P78332	1123 aa	Known RBP	13.97	□□□□□ -0.17
TMPO-212	ENST00000556029	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.97	□□□□□ -0.17
TMPO-212	ENST00000556029	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.97	□□□□□ -0.17
TMPO-212	ENST00000556029	MYL10	Q9BUA6	226 aa		13.97	□□□□□ -0.17
TMPO-212	ENST00000556029	RNF41	Q9H4P4	317 aa	Predicted RBP	13.97	□□□□□ -0.17
TMPO-212	ENST00000556029	OGFR	Q9NZT2	677 aa		13.97	□□□□□ -0.17
TMPO-212	ENST00000556029	MAP3K15	Q6ZN16	1313 aa		13.97	□□□□□ -0.17
TMPO-212	ENST00000556029	CMA1	P23946	247 aa		13.97	□□□□□ -0.17
TMPO-212	ENST00000556029	PUM3	Q15397	648 aa	Known RBP	13.97	□□□□□ -0.17
TMPO-212	ENST00000556029	KRT40	Q6A162	431 aa		13.97	□□□□□ -0.17
TMPO-212	ENST00000556029	CACNA2D4	Q7Z3S7	1137 aa		13.97	□□□□□ -0.17
TMPO-212	ENST00000556029	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.97	□□□□□ -0.17
TMPO-212	ENST00000556029	DRC1	Q96MC2	740 aa		13.97	□□□□□ -0.17
TMPO-212	ENST00000556029	AIFM3	Q96NN9	605 aa		13.97	□□□□□ -0.17
TMPO-212	ENST00000556029	SLU7	O95391	586 aa	Known RBP	13.96	□□□□□ -0.17
TMPO-212	ENST00000556029	WTAP	Q15007	396 aa		13.96	□□□□□ -0.17
TMPO-212	ENST00000556029	MYO1B	O43795	1136 aa		13.96	□□□□□ -0.17
TMPO-212	ENST00000556029	UBASH3A	P57075	661 aa		13.96	□□□□□ -0.17
TMPO-212	ENST00000556029	FANCC	Q00597	558 aa		13.96	□□□□□ -0.17
TMPO-212	ENST00000556029	SSRP1	Q08945	709 aa	Known RBP	13.96	□□□□□ -0.17
TMPO-212	ENST00000556029	KIF28P	B7ZC32	967 aa		13.96	□□□□□ -0.18
TMPO-212	ENST00000556029	GYG1	P46976	350 aa		13.96	□□□□□ -0.18
TMPO-212	ENST00000556029	BCAM	P50895	628 aa		13.96	□□□□□ -0.18
TMPO-212	ENST00000556029	ST5	P78524	1137 aa		13.96	□□□□□ -0.18
TMPO-212	ENST00000556029	CCZ1B	P86790	482 aa		13.96	□□□□□ -0.18
TMPO-212	ENST00000556029	CCZ1	P86791	482 aa	Predicted RBP	13.96	□□□□□ -0.18
TMPO-212	ENST00000556029	PICALM	Q13492	652 aa		13.96	□□□□□ -0.18
TMPO-212	ENST00000556029	SPA17	Q15506	151 aa		13.96	□□□□□ -0.18
TMPO-212	ENST00000556029	SYT10	Q6XYQ8	523 aa		13.96	□□□□□ -0.18
TMPO-212	ENST00000556029	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.96	□□□□□ -0.18
TMPO-212	ENST00000556029	PCCA	P05165	728 aa	Predicted RBP	13.95	□□□□□ -0.18
TMPO-212	ENST00000556029	PARP10	Q53GL7	1025 aa		13.95	□□□□□ -0.18
TMPO-212	ENST00000556029	CNBD1	Q8NA66	436 aa		13.95	□□□□□ -0.18
TMPO-212	ENST00000556029	CCDC148	Q8NFR7	591 aa		13.95	□□□□□ -0.18
TMPO-212	ENST00000556029	GTPBP4	Q9BZE4	634 aa	Known RBP	13.95	□□□□□ -0.18
TMPO-212	ENST00000556029	GOPC	Q9HD26	462 aa		13.95	□□□□□ -0.18
TMPO-212	ENST00000556029	MAGEB6P1	A0A0J9YX57	407 aa		13.95	□□□□□ -0.18
TMPO-212	ENST00000556029	GOLGA6L7	A0A1B0GV03	622 aa		13.95	□□□□□ -0.18
TMPO-212	ENST00000556029	KCNQ2	O43526	872 aa		13.95	□□□□□ -0.18
TMPO-212	ENST00000556029	PHKA1	P46020	1223 aa		13.95	□□□□□ -0.18
TMPO-212	ENST00000556029	CCDC102B	Q68D86	513 aa		13.95	□□□□□ -0.18
TMPO-212	ENST00000556029	ANTXR2	P58335	489 aa		13.95	□□□□□ -0.18
TMPO-212	ENST00000556029	DMTN	Q08495	405 aa		13.95	□□□□□ -0.18
TMPO-212	ENST00000556029	CATIP	Q7Z7H3	387 aa		13.95	□□□□□ -0.18
TMPO-212	ENST00000556029	ZNF397	Q8NF99	534 aa	Predicted RBP	13.95	□□□□□ -0.18
TMPO-212	ENST00000556029	ERO1A	Q96HE7	468 aa		13.95	□□□□□ -0.18
TMPO-212	ENST00000556029	ISCA1	Q9BUE6	129 aa		13.95	□□□□□ -0.18
TMPO-212	ENST00000556029	HPS5	Q9UPZ3	1129 aa		13.95	□□□□□ -0.18
TMPO-212	ENST00000556029	ZNF532	Q9HCE3	1301 aa		13.95	□□□□□ -0.18
TMPO-212	ENST00000556029	SLC39A14	Q15043	492 aa		13.95	□□□□□ -0.18
TMPO-212	ENST00000556029	ZMYM6	O95789	1325 aa		13.94	□□□□□ -0.18
TMPO-212	ENST00000556029	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.94	□□□□□ -0.18
TMPO-212	ENST00000556029	TNS3	Q68CZ2	1445 aa		13.94	□□□□□ -0.18
TMPO-212	ENST00000556029	PRPF4B	Q13523	1007 aa	Known RBP	13.94	□□□□□ -0.18
TMPO-212	ENST00000556029	ELF2	Q15723	593 aa		13.94	□□□□□ -0.18
TMPO-212	ENST00000556029	MCM9	Q9NXL9	1143 aa		13.94	□□□□□ -0.18
TMPO-212	ENST00000556029	PLCD3	Q8N3E9	789 aa		13.94	□□□□□ -0.18
TMPO-212	ENST00000556029	BBX	Q8WY36	941 aa	Predicted RBP	13.94	□□□□□ -0.18
TMPO-212	ENST00000556029	CALCOCO1	Q9P1Z2	691 aa		13.94	□□□□□ -0.18
TMPO-212	ENST00000556029	C5	P01031	1676 aa		13.94	□□□□□ -0.18
TMPO-212	ENST00000556029	CCDC196	A0A1B0GTZ2	297 aa		13.94	□□□□□ -0.18
TMPO-212	ENST00000556029	MCAM	P43121	646 aa		13.94	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms