RNA–Protein interactions for RNA: ENST00000555943.1

SUPT16H-204, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2 BASIC

Gene SUPT16H, Length 915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-204ENST00000555943 CAMTA2O94983 1202 aa9.56□□□□□ -0.88
SUPT16H-204ENST00000555943 TM4SF1P30408 202 aa9.56□□□□□ -0.88
SUPT16H-204ENST00000555943 SERPINB4P48594 390 aa9.56□□□□□ -0.88
SUPT16H-204ENST00000555943 TCIRG1Q13488 830 aa9.56□□□□□ -0.88
SUPT16H-204ENST00000555943 SH3PXD2AQ5TCZ1 1133 aa9.56□□□□□ -0.88
SUPT16H-204ENST00000555943 USPL1Q5W0Q7 1092 aa9.56□□□□□ -0.88
SUPT16H-204ENST00000555943 CLEC4GQ6UXB4 293 aa9.56□□□□□ -0.88
SUPT16H-204ENST00000555943 ITPRIPQ8IWB1 547 aa9.56□□□□□ -0.88
SUPT16H-204ENST00000555943 PANK1Q8TE04 598 aa9.56□□□□□ -0.88
SUPT16H-204ENST00000555943 RHBDD1Q8TEB9 315 aa9.56□□□□□ -0.88
SUPT16H-204ENST00000555943 ZFP42Q96MM3 310 aa9.56□□□□□ -0.88
SUPT16H-204ENST00000555943 SRCIN1Q9C0H9 1055 aa9.56□□□□□ -0.88
SUPT16H-204ENST00000555943 GZF1Q9H116 711 aaPredicted RBP9.56□□□□□ -0.88
SUPT16H-204ENST00000555943 CHMP4BQ9H444 224 aaKnown RBP9.56□□□□□ -0.88
SUPT16H-204ENST00000555943 PIM2Q9P1W9 311 aa9.56□□□□□ -0.88
SUPT16H-204ENST00000555943 SERTM1A2A2V5 107 aa9.55□□□□□ -0.88
SUPT16H-204ENST00000555943 TTLL8A6PVC2 850 aa9.55□□□□□ -0.88
SUPT16H-204ENST00000555943 POLRMTO00411 1230 aaKnown RBP9.55□□□□□ -0.88
SUPT16H-204ENST00000555943 EML1O00423 815 aa9.55□□□□□ -0.88
SUPT16H-204ENST00000555943 NPHP1O15259 732 aa9.55□□□□□ -0.88
SUPT16H-204ENST00000555943 DPEP1P16444 411 aa9.55□□□□□ -0.88
SUPT16H-204ENST00000555943 GTF2E1P29083 439 aaPredicted RBP9.55□□□□□ -0.88
SUPT16H-204ENST00000555943 HLFQ16534 295 aa9.55□□□□□ -0.88
SUPT16H-204ENST00000555943 GNASQ5JWF2 1037 aa9.55□□□□□ -0.88
SUPT16H-204ENST00000555943 BICDL1Q6ZP65 573 aa9.55□□□□□ -0.88
SUPT16H-204ENST00000555943 TMEM57Q8N5G2 664 aa9.55□□□□□ -0.88
SUPT16H-204ENST00000555943 LINS1Q8NG48 757 aa9.55□□□□□ -0.88
SUPT16H-204ENST00000555943 COL26A1Q96A83 441 aa9.55□□□□□ -0.88
SUPT16H-204ENST00000555943 NIFKQ9BYG3 293 aaKnown RBP9.55□□□□□ -0.88
SUPT16H-204ENST00000555943 SRP68Q9UHB9 627 aaKnown RBP9.55□□□□□ -0.88
SUPT16H-204ENST00000555943 DACH1Q9UI36 760 aa9.55□□□□□ -0.88
SUPT16H-204ENST00000555943 TNNQ9UQP3 1299 aa9.55□□□□□ -0.88
SUPT16H-204ENST00000555943 NRXN2Q9P2S2 1712 aa9.55□□□□□ -0.88
SUPT16H-204ENST00000555943 ABCC4O15439 1325 aa9.55□□□□□ -0.88
SUPT16H-204ENST00000555943 RNF123Q5XPI4 1314 aa9.55□□□□□ -0.88
SUPT16H-204ENST00000555943 AFDNP55196 1824 aaKnown RBP9.54□□□□□ -0.88
SUPT16H-204ENST00000555943 SPATA31C2B4DYI2 1134 aa9.54□□□□□ -0.88
SUPT16H-204ENST00000555943 ALDH1L1O75891 902 aa9.54□□□□□ -0.88
SUPT16H-204ENST00000555943 GPTP24298 496 aa9.54□□□□□ -0.88
SUPT16H-204ENST00000555943 NOS2P35228 1153 aa9.54□□□□□ -0.88
SUPT16H-204ENST00000555943 IRX6P78412 446 aaPredicted RBP9.54□□□□□ -0.88
SUPT16H-204ENST00000555943 C4orf17Q53FE4 359 aa9.54□□□□□ -0.88
SUPT16H-204ENST00000555943 DALRD3Q5D0E6 543 aaKnown RBP9.54□□□□□ -0.88
SUPT16H-204ENST00000555943 BEND3Q5T5X7 828 aa9.54□□□□□ -0.88
SUPT16H-204ENST00000555943 C20orf194Q5TEA3 1177 aa9.54□□□□□ -0.88
SUPT16H-204ENST00000555943 INTS3Q68E01 1043 aaKnown RBP9.54□□□□□ -0.88
SUPT16H-204ENST00000555943 PRICKLE2Q7Z3G6 844 aa9.54□□□□□ -0.88
SUPT16H-204ENST00000555943 VTI1AQ96AJ9 217 aa9.54□□□□□ -0.88
SUPT16H-204ENST00000555943 SETDB2Q96T68 719 aa9.54□□□□□ -0.88
SUPT16H-204ENST00000555943 ATP13A2Q9NQ11 1180 aa9.54□□□□□ -0.88
SUPT16H-204ENST00000555943 CWC25Q9NXE8 425 aaPredicted RBP9.54□□□□□ -0.88
SUPT16H-204ENST00000555943 C9orf78Q9NZ63 289 aaPredicted RBP9.54□□□□□ -0.88
SUPT16H-204ENST00000555943 DDX19BQ9UMR2 479 aa9.54□□□□□ -0.88
SUPT16H-204ENST00000555943 MTMR7Q9Y216 660 aa9.54□□□□□ -0.88
SUPT16H-204ENST00000555943 NIP7Q9Y221 180 aaKnown RBP eCLIP9.54□□□□□ -0.88
SUPT16H-204ENST00000555943 CHMP3Q9Y3E7 222 aa9.54□□□□□ -0.88
SUPT16H-204ENST00000555943 DLEC1Q9Y238 1755 aa9.53□□□□□ -0.88
SUPT16H-204ENST00000555943 FIGNL2A6NMB9 653 aa9.53□□□□□ -0.88
SUPT16H-204ENST00000555943 NEURL1BA8MQ27 555 aa9.53□□□□□ -0.88
SUPT16H-204ENST00000555943 RLBP1P12271 317 aa9.53□□□□□ -0.88
SUPT16H-204ENST00000555943 KCNA3P22001 575 aa9.53□□□□□ -0.88
SUPT16H-204ENST00000555943 DDR1Q08345 913 aa9.53□□□□□ -0.88
SUPT16H-204ENST00000555943 POU4F2Q12837 409 aa9.53□□□□□ -0.88
SUPT16H-204ENST00000555943 MVPQ14764 893 aaKnown RBP9.53□□□□□ -0.88
SUPT16H-204ENST00000555943 NAA30Q147X3 362 aaPredicted RBP9.53□□□□□ -0.88
SUPT16H-204ENST00000555943 CWF19L2Q2TBE0 894 aaKnown RBP9.53□□□□□ -0.88
SUPT16H-204ENST00000555943 PARP10Q53GL7 1025 aa9.53□□□□□ -0.88
SUPT16H-204ENST00000555943 ARHGAP27Q6ZUM4 889 aa9.53□□□□□ -0.88
SUPT16H-204ENST00000555943 PPP1R42Q7Z4L9 355 aa9.53□□□□□ -0.88
SUPT16H-204ENST00000555943 CCDC191Q8NCU4 936 aa9.53□□□□□ -0.88
SUPT16H-204ENST00000555943 PODXL2Q9NZ53 605 aa9.53□□□□□ -0.88
SUPT16H-204ENST00000555943 WWC3Q9ULE0 1092 aa9.53□□□□□ -0.88
SUPT16H-204ENST00000555943 ZNF232Q9UNY5 417 aa9.53□□□□□ -0.88
SUPT16H-204ENST00000555943 HDAC5Q9UQL6 1122 aa9.53□□□□□ -0.88
SUPT16H-204ENST00000555943 SCN7AQ01118 1682 aa9.52□□□□□ -0.89
SUPT16H-204ENST00000555943 FAM177BA6PVY3 158 aa9.52□□□□□ -0.89
SUPT16H-204ENST00000555943 PLA2G4AP47712 749 aa9.52□□□□□ -0.89
SUPT16H-204ENST00000555943 HIRAP54198 1017 aaPredicted RBP9.52□□□□□ -0.89
SUPT16H-204ENST00000555943 GCKRQ14397 625 aa9.52□□□□□ -0.89
SUPT16H-204ENST00000555943 NFIXQ14938 502 aa9.52□□□□□ -0.89
SUPT16H-204ENST00000555943 TBC1D9BQ66K14 1250 aa9.52□□□□□ -0.89
SUPT16H-204ENST00000555943 LYSMD3Q7Z3D4 306 aa9.52□□□□□ -0.89
SUPT16H-204ENST00000555943 ZNF34Q8IZ26 560 aa9.52□□□□□ -0.89
SUPT16H-204ENST00000555943 GTF3C2Q8WUA4 911 aaPredicted RBP9.52□□□□□ -0.89
SUPT16H-204ENST00000555943 ISCA1Q9BUE6 129 aa9.52□□□□□ -0.89
SUPT16H-204ENST00000555943 UTP14AQ9BVJ6 771 aaKnown RBP9.52□□□□□ -0.89
SUPT16H-204ENST00000555943 TRMT112Q9UI30 125 aaKnown RBP9.52□□□□□ -0.89
SUPT16H-204ENST00000555943 CACNA1FO60840 1977 aa9.52□□□□□ -0.89
SUPT16H-204ENST00000555943 SBF1O95248 1867 aa9.51□□□□□ -0.89
SUPT16H-204ENST00000555943 ABL1P00519 1130 aa9.51□□□□□ -0.89
SUPT16H-204ENST00000555943 SERPINB2P05120 415 aa9.51□□□□□ -0.89
SUPT16H-204ENST00000555943 IGKV5-2P06315 115 aa9.51□□□□□ -0.89
SUPT16H-204ENST00000555943 GNAI3P08754 354 aa9.51□□□□□ -0.89
SUPT16H-204ENST00000555943 HSP90B1P14625 803 aaKnown RBP9.51□□□□□ -0.89
SUPT16H-204ENST00000555943 PHKA2P46019 1235 aa9.51□□□□□ -0.89
SUPT16H-204ENST00000555943 TRIM28Q13263 835 aaKnown RBP9.51□□□□□ -0.89
SUPT16H-204ENST00000555943 TPTE2Q6XPS3 522 aa9.51□□□□□ -0.89
SUPT16H-204ENST00000555943 NLRP10Q86W26 655 aa9.51□□□□□ -0.89
SUPT16H-204ENST00000555943 NBPF5PQ86XG9 351 aaPredicted RBP9.51□□□□□ -0.89
SUPT16H-204ENST00000555943 CRBNQ96SW2 442 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms