RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 CDCP2Q5VXM1 449 aa4.25□□□□□ -1.73
MTHFD1-212ENST00000555858 MRM1Q6IN84 353 aaKnown RBP4.25□□□□□ -1.73
MTHFD1-212ENST00000555858 UNC5AQ6ZN44 842 aa4.25□□□□□ -1.73
MTHFD1-212ENST00000555858 SPATC1Q76KD6 591 aa4.25□□□□□ -1.73
MTHFD1-212ENST00000555858 CYFIP1Q7L576 1253 aa4.25□□□□□ -1.73
MTHFD1-212ENST00000555858 NLRC3Q7RTR2 1065 aa4.25□□□□□ -1.73
MTHFD1-212ENST00000555858 WFDC8Q8IUA0 241 aa4.25□□□□□ -1.73
MTHFD1-212ENST00000555858 KLHL23Q8NBE8 558 aa4.25□□□□□ -1.73
MTHFD1-212ENST00000555858 EPN3Q9H201 632 aa4.25□□□□□ -1.73
MTHFD1-212ENST00000555858 PHAXQ9H814 394 aaKnown RBP4.25□□□□□ -1.73
MTHFD1-212ENST00000555858 CNNM2Q9H8M5 875 aa4.25□□□□□ -1.73
MTHFD1-212ENST00000555858 METTL14Q9HCE5 456 aaKnown RBP4.25□□□□□ -1.73
MTHFD1-212ENST00000555858 PFDN2Q9UHV9 154 aa4.25□□□□□ -1.73
MTHFD1-212ENST00000555858 ADAM30Q9UKF2 790 aa4.25□□□□□ -1.73
MTHFD1-212ENST00000555858 PTCH2Q9Y6C5 1203 aa4.25□□□□□ -1.73
MTHFD1-212ENST00000555858 IGF1RP08069 1367 aa4.25□□□□□ -1.73
MTHFD1-212ENST00000555858 PRAMEF27A3QJZ7 478 aa4.24□□□□□ -1.73
MTHFD1-212ENST00000555858 TNFRSF10CO14798 259 aa4.24□□□□□ -1.73
MTHFD1-212ENST00000555858 LILRB5O75023 590 aa4.24□□□□□ -1.73
MTHFD1-212ENST00000555858 CTSBP07858 339 aa4.24□□□□□ -1.73
MTHFD1-212ENST00000555858 ACRP10323 421 aa4.24□□□□□ -1.73
MTHFD1-212ENST00000555858 EPXP11678 715 aa4.24□□□□□ -1.73
MTHFD1-212ENST00000555858 LIG1P18858 919 aa4.24□□□□□ -1.73
MTHFD1-212ENST00000555858 SUZ12Q15022 739 aaKnown RBP4.24□□□□□ -1.73
MTHFD1-212ENST00000555858 ZYXQ15942 572 aaKnown RBP4.24□□□□□ -1.73
MTHFD1-212ENST00000555858 VHLLQ6RSH7 139 aa4.24□□□□□ -1.73
MTHFD1-212ENST00000555858 MAP4K3Q8IVH8 894 aa4.24□□□□□ -1.73
MTHFD1-212ENST00000555858 ZSWIM2Q8NEG5 633 aa4.24□□□□□ -1.73
MTHFD1-212ENST00000555858 CARD10Q9BWT7 1032 aa4.24□□□□□ -1.73
MTHFD1-212ENST00000555858 LTBP3Q9NS15 1303 aa4.23□□□□□ -1.73
MTHFD1-212ENST00000555858 LOC100289279A0A1B0GTE1 492 aa4.23□□□□□ -1.73
MTHFD1-212ENST00000555858 IQCA1LA6NCM1 817 aa4.23□□□□□ -1.73
MTHFD1-212ENST00000555858 DCDC2CA8MYV0 355 aa4.23□□□□□ -1.73
MTHFD1-212ENST00000555858 M0R082 166 aa4.23□□□□□ -1.73
MTHFD1-212ENST00000555858 SUSD5O60279 629 aa4.23□□□□□ -1.73
MTHFD1-212ENST00000555858 DNAJA2O60884 412 aa4.23□□□□□ -1.73
MTHFD1-212ENST00000555858 PGRP06401 933 aa4.23□□□□□ -1.73
MTHFD1-212ENST00000555858 SLFN14P0C7P3 912 aa4.23□□□□□ -1.73
MTHFD1-212ENST00000555858 GRK4P32298 578 aa4.23□□□□□ -1.73
MTHFD1-212ENST00000555858 LONRF2Q1L5Z9 754 aa4.23□□□□□ -1.73
MTHFD1-212ENST00000555858 TKFCQ3LXA3 575 aa4.23□□□□□ -1.73
MTHFD1-212ENST00000555858 ZC3H12AQ5D1E8 599 aaKnown RBP4.23□□□□□ -1.73
MTHFD1-212ENST00000555858 TMEM67Q5HYA8 995 aa4.23□□□□□ -1.73
MTHFD1-212ENST00000555858 ZC3H12BQ5HYM0 836 aaKnown RBP4.23□□□□□ -1.73
MTHFD1-212ENST00000555858 MSL1Q68DK7 614 aa4.23□□□□□ -1.73
MTHFD1-212ENST00000555858 NPAS3Q8IXF0 933 aa4.23□□□□□ -1.73
MTHFD1-212ENST00000555858 LRRC47Q8N1G4 583 aaKnown RBP4.23□□□□□ -1.73
MTHFD1-212ENST00000555858 ZNF417Q8TAU3 575 aa4.23□□□□□ -1.73
MTHFD1-212ENST00000555858 WDR89Q96FK6 387 aaPredicted RBP4.23□□□□□ -1.73
MTHFD1-212ENST00000555858 KLHDC7BQ96G42 594 aa4.23□□□□□ -1.73
MTHFD1-212ENST00000555858 ZNF587Q96SQ5 575 aaPredicted RBP4.23□□□□□ -1.73
MTHFD1-212ENST00000555858 SLC9A7Q96T83 725 aa4.23□□□□□ -1.73
MTHFD1-212ENST00000555858 SPATA9Q9BWV2 254 aa4.23□□□□□ -1.73
MTHFD1-212ENST00000555858 USP26Q9BXU7 913 aa4.23□□□□□ -1.73
MTHFD1-212ENST00000555858 WNT10AQ9GZT5 417 aa4.23□□□□□ -1.73
MTHFD1-212ENST00000555858 KLHL3Q9UH77 587 aa4.23□□□□□ -1.73
MTHFD1-212ENST00000555858 PLAAQ9Y263 795 aa4.23□□□□□ -1.73
MTHFD1-212ENST00000555858 SYNGAP1Q96PV0 1343 aa4.22□□□□□ -1.73
MTHFD1-212ENST00000555858 TM4SF5O14894 197 aa4.22□□□□□ -1.73
MTHFD1-212ENST00000555858 MARCH6O60337 910 aa4.22□□□□□ -1.73
MTHFD1-212ENST00000555858 AOC2O75106 756 aa4.22□□□□□ -1.73
MTHFD1-212ENST00000555858 ASMTLO95671 621 aa4.22□□□□□ -1.73
MTHFD1-212ENST00000555858 RAG1P15918 1043 aa4.22□□□□□ -1.73
MTHFD1-212ENST00000555858 CCNFP41002 786 aa4.22□□□□□ -1.73
MTHFD1-212ENST00000555858 MASP1P48740 699 aa4.22□□□□□ -1.73
MTHFD1-212ENST00000555858 YARSP54577 528 aaKnown RBP4.22□□□□□ -1.73
MTHFD1-212ENST00000555858 NLRP12P59046 1061 aa4.22□□□□□ -1.73
MTHFD1-212ENST00000555858 ETF1P62495 437 aaKnown RBP4.22□□□□□ -1.73
MTHFD1-212ENST00000555858 ERVK-24P63145 666 aa4.22□□□□□ -1.73
MTHFD1-212ENST00000555858 AMPD3Q01432 767 aa4.22□□□□□ -1.73
MTHFD1-212ENST00000555858 SLC7A5Q01650 507 aa4.22□□□□□ -1.73
MTHFD1-212ENST00000555858 RING1Q06587 406 aa4.22□□□□□ -1.73
MTHFD1-212ENST00000555858 SETDB1Q15047 1291 aa4.22□□□□□ -1.73
MTHFD1-212ENST00000555858 SLC10A6Q3KNW5 377 aa4.22□□□□□ -1.73
MTHFD1-212ENST00000555858 BBS9Q3SYG4 887 aa4.22□□□□□ -1.73
MTHFD1-212ENST00000555858 KIAA1211LQ6NV74 962 aa4.22□□□□□ -1.73
MTHFD1-212ENST00000555858 C12orf40Q86WS4 652 aa4.22□□□□□ -1.73
MTHFD1-212ENST00000555858 GPR161Q8N6U8 529 aaKnown RBP4.22□□□□□ -1.73
MTHFD1-212ENST00000555858 DCAF11Q8TEB1 546 aa4.22□□□□□ -1.73
MTHFD1-212ENST00000555858 ACSF2Q96CM8 615 aaPredicted RBP4.22□□□□□ -1.73
MTHFD1-212ENST00000555858 SLC26A8Q96RN1 970 aa4.22□□□□□ -1.73
MTHFD1-212ENST00000555858 WDR18Q9BV38 432 aa4.22□□□□□ -1.73
MTHFD1-212ENST00000555858 IRX2Q9BZI1 471 aaPredicted RBP4.22□□□□□ -1.73
MTHFD1-212ENST00000555858 PRDM6Q9NQX0 595 aa4.22□□□□□ -1.73
MTHFD1-212ENST00000555858 NXF1Q9UBU9 619 aaKnown RBP4.22□□□□□ -1.73
MTHFD1-212ENST00000555858 ZNF214Q9UL59 606 aaPredicted RBP4.22□□□□□ -1.73
MTHFD1-212ENST00000555858 PCDHB10Q9UN67 800 aa4.22□□□□□ -1.73
MTHFD1-212ENST00000555858 PCDHGC5Q9Y5F6 944 aa4.22□□□□□ -1.73
MTHFD1-212ENST00000555858 CSADQ9Y600 493 aa4.22□□□□□ -1.73
MTHFD1-212ENST00000555858 CCDC163A0A0D9SF12 145 aa4.21□□□□□ -1.74
MTHFD1-212ENST00000555858 FAM86C2PA6NEL3 165 aa4.21□□□□□ -1.74
MTHFD1-212ENST00000555858 CHURC1-FNTBB4DL54 471 aa4.21□□□□□ -1.74
MTHFD1-212ENST00000555858 AGRPO00253 132 aa4.21□□□□□ -1.74
MTHFD1-212ENST00000555858 FANCGO15287 622 aa4.21□□□□□ -1.74
MTHFD1-212ENST00000555858 VIL1P09327 827 aaKnown RBP4.21□□□□□ -1.74
MTHFD1-212ENST00000555858 FAM153BP0C7A2 387 aa4.21□□□□□ -1.74
MTHFD1-212ENST00000555858 VSIG8P0DPA2 414 aa4.21□□□□□ -1.74
MTHFD1-212ENST00000555858 NAT2P11245 290 aa4.21□□□□□ -1.74
MTHFD1-212ENST00000555858 ZNF143P52747 638 aaPredicted RBP4.21□□□□□ -1.74
MTHFD1-212ENST00000555858 ID3Q02535 119 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms