RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 EVI5LQ96CN4 794 aa27.54■■■□□ 2
CDKN3-208ENST00000555837 ZIC5Q96T25 663 aa27.54■■■□□ 2
CDKN3-208ENST00000555837 RNF113AO15541 343 aaKnown RBP27.53■■■□□ 2
CDKN3-208ENST00000555837 INPP5BP32019 993 aa27.53■■■□□ 2
CDKN3-208ENST00000555837 APPBP2Q92624 585 aa27.53■■■□□ 2
CDKN3-208ENST00000555837 FSD1Q9BTV5 496 aa27.53■■■□□ 2
CDKN3-208ENST00000555837 EHD4Q9H223 541 aa27.53■■■□□ 2
CDKN3-208ENST00000555837 RNF186Q9NXI6 227 aa27.53■■■□□ 2
CDKN3-208ENST00000555837 SALL3Q9BXA9 1300 aa27.52■■■□□ 2
CDKN3-208ENST00000555837 PHF20L1A8MW92 1017 aa27.52■■■□□ 2
CDKN3-208ENST00000555837 TRPA1O75762 1119 aa27.52■■■□□ 2
CDKN3-208ENST00000555837 POLR3DP05423 398 aaPredicted RBP27.52■■■□□ 2
CDKN3-208ENST00000555837 GNAT2P19087 354 aa27.52■■■□□ 2
CDKN3-208ENST00000555837 TSHZ3Q63HK5 1081 aa27.52■■■□□ 2
CDKN3-208ENST00000555837 PALD1Q9ULE6 856 aa27.52■■■□□ 2
CDKN3-208ENST00000555837 FOCADQ5VW36 1801 aa27.52■■■□□ 2
CDKN3-208ENST00000555837 OTOFQ9HC10 1997 aa27.51■■■□□ 2
CDKN3-208ENST00000555837 TESPA1A2RU30 521 aaPredicted RBP27.51■■□□□ 1.99
CDKN3-208ENST00000555837 MBD4O95243 580 aa27.51■■□□□ 1.99
CDKN3-208ENST00000555837 CENPBP07199 599 aaPredicted RBP27.51■■□□□ 1.99
CDKN3-208ENST00000555837 HSPA8P11142 646 aaKnown RBP27.51■■□□□ 1.99
CDKN3-208ENST00000555837 METTL16Q86W50 562 aaKnown RBP27.51■■□□□ 1.99
CDKN3-208ENST00000555837 ZCCHC17Q9NP64 241 aaKnown RBP27.51■■□□□ 1.99
CDKN3-208ENST00000555837 SERPINB13Q9UIV8 391 aa27.51■■□□□ 1.99
CDKN3-208ENST00000555837 PCNTO95613 3336 aa27.51■■□□□ 1.99
CDKN3-208ENST00000555837 MYH7P12883 1935 aa27.51■■□□□ 1.99
CDKN3-208ENST00000555837 CXCL11O14625 94 aa27.5■■□□□ 1.99
CDKN3-208ENST00000555837 NEFLP07196 543 aa27.5■■□□□ 1.99
CDKN3-208ENST00000555837 LBX1P52954 281 aa27.5■■□□□ 1.99
CDKN3-208ENST00000555837 IFNL1Q8IU54 200 aa27.5■■□□□ 1.99
CDKN3-208ENST00000555837 CFHR5Q9BXR6 569 aa27.5■■□□□ 1.99
CDKN3-208ENST00000555837 MCM9Q9NXL9 1143 aa27.5■■□□□ 1.99
CDKN3-208ENST00000555837 ASNSP08243 561 aa27.49■■□□□ 1.99
CDKN3-208ENST00000555837 NOM1Q5C9Z4 860 aaKnown RBP27.49■■□□□ 1.99
CDKN3-208ENST00000555837 OTUD7AQ8TE49 926 aaPredicted RBP27.49■■□□□ 1.99
CDKN3-208ENST00000555837 OSBPL3Q9H4L5 887 aa27.49■■□□□ 1.99
CDKN3-208ENST00000555837 ARMT1Q9H993 441 aa27.49■■□□□ 1.99
CDKN3-208ENST00000555837 AS3MTQ9HBK9 375 aa27.49■■□□□ 1.99
CDKN3-208ENST00000555837 SAP30BPQ9UHR5 308 aaKnown RBP27.49■■□□□ 1.99
CDKN3-208ENST00000555837 CCL15-CCL14A0A0B4J2E2 113 aa27.48■■□□□ 1.99
CDKN3-208ENST00000555837 CAP2P40123 477 aa27.48■■□□□ 1.99
CDKN3-208ENST00000555837 CCL15Q16663 113 aa27.48■■□□□ 1.99
CDKN3-208ENST00000555837 GIMAP6Q6P9H5 292 aa27.48■■□□□ 1.99
CDKN3-208ENST00000555837 LCORLQ8N3X6 602 aa27.48■■□□□ 1.99
CDKN3-208ENST00000555837 IRF6O14896 467 aa27.47■■□□□ 1.99
CDKN3-208ENST00000555837 FASTKD5Q7L8L6 764 aaKnown RBP27.47■■□□□ 1.99
CDKN3-208ENST00000555837 DCP1AQ9NPI6 582 aaPredicted RBP27.47■■□□□ 1.99
CDKN3-208ENST00000555837 SLC4A4Q9Y6R1 1079 aa27.47■■□□□ 1.99
CDKN3-208ENST00000555837 ZHX2Q9Y6X8 837 aa27.47■■□□□ 1.99
CDKN3-208ENST00000555837 LAMB1P07942 1786 aa27.46■■□□□ 1.99
CDKN3-208ENST00000555837 PTPRAP18433 802 aa27.46■■□□□ 1.99
CDKN3-208ENST00000555837 GJA5P36382 358 aa27.46■■□□□ 1.99
CDKN3-208ENST00000555837 MS4A4AQ96JQ5 239 aa27.46■■□□□ 1.99
CDKN3-208ENST00000555837 KCNH4Q9UQ05 1017 aa27.46■■□□□ 1.99
CDKN3-208ENST00000555837 CDK5RAP2Q96SN8 1893 aa27.46■■□□□ 1.99
CDKN3-208ENST00000555837 TRIM6-TRIM34B2RNG4 842 aa27.45■■□□□ 1.98
CDKN3-208ENST00000555837 NACAP1Q9BZK3 213 aa27.45■■□□□ 1.98
CDKN3-208ENST00000555837 SWAP70Q9UH65 585 aa27.45■■□□□ 1.98
CDKN3-208ENST00000555837 MYH1P12882 1939 aa27.45■■□□□ 1.98
CDKN3-208ENST00000555837 USP17L5A8MUK1 530 aa27.44■■□□□ 1.98
CDKN3-208ENST00000555837 SDR42E1Q8WUS8 393 aa27.44■■□□□ 1.98
CDKN3-208ENST00000555837 PUS7LQ9H0K6 701 aaKnown RBP27.44■■□□□ 1.98
CDKN3-208ENST00000555837 CABP5Q9NP86 173 aa27.44■■□□□ 1.98
CDKN3-208ENST00000555837 ARPP21Q9UBL0 812 aaPredicted RBP27.44■■□□□ 1.98
CDKN3-208ENST00000555837 CNKSR2Q8WXI2 1034 aa27.43■■□□□ 1.98
CDKN3-208ENST00000555837 STRBPQ96SI9 672 aaKnown RBP27.43■■□□□ 1.98
CDKN3-208ENST00000555837 ZFYVE28Q9HCC9 887 aa27.43■■□□□ 1.98
CDKN3-208ENST00000555837 HIP1O00291 1037 aa27.42■■□□□ 1.98
CDKN3-208ENST00000555837 PLEKHM2Q8IWE5 1019 aa27.42■■□□□ 1.98
CDKN3-208ENST00000555837 ZNF287Q9HBT7 754 aa27.42■■□□□ 1.98
CDKN3-208ENST00000555837 DOCK1Q14185 1865 aa27.41■■□□□ 1.98
CDKN3-208ENST00000555837 MFAP1P55081 439 aaKnown RBP27.41■■□□□ 1.98
CDKN3-208ENST00000555837 CERKLQ49MI3 558 aaPredicted RBP27.41■■□□□ 1.98
CDKN3-208ENST00000555837 TATDN1Q6P1N9 297 aa27.41■■□□□ 1.98
CDKN3-208ENST00000555837 BRI3BPQ8WY22 251 aa27.41■■□□□ 1.98
CDKN3-208ENST00000555837 AFG3L2Q9Y4W6 797 aa27.41■■□□□ 1.98
CDKN3-208ENST00000555837 FAM196BA6NMK8 535 aa27.4■■□□□ 1.98
CDKN3-208ENST00000555837 GPAA1O43292 621 aa27.4■■□□□ 1.98
CDKN3-208ENST00000555837 APPP05067 770 aa27.4■■□□□ 1.98
CDKN3-208ENST00000555837 ARHGEF6Q15052 776 aa27.4■■□□□ 1.98
CDKN3-208ENST00000555837 ZMYM1Q5SVZ6 1142 aa27.4■■□□□ 1.98
CDKN3-208ENST00000555837 ANKRD23Q86SG2 305 aa27.4■■□□□ 1.98
CDKN3-208ENST00000555837 ZNF280CQ8ND82 737 aa27.4■■□□□ 1.98
CDKN3-208ENST00000555837 OSBP2Q969R2 916 aa27.4■■□□□ 1.98
CDKN3-208ENST00000555837 RILPL2Q969X0 211 aa27.4■■□□□ 1.98
CDKN3-208ENST00000555837 HELLSQ9NRZ9 838 aa27.4■■□□□ 1.98
CDKN3-208ENST00000555837 TSKSQ9UJT2 592 aa27.4■■□□□ 1.98
CDKN3-208ENST00000555837 NAV1Q8NEY1 1877 aa27.4■■□□□ 1.98
CDKN3-208ENST00000555837 IGF2BP3O00425 579 aaKnown RBP eCLIP27.39■■□□□ 1.98
CDKN3-208ENST00000555837 PABPC4Q13310 644 aaKnown RBP eCLIP27.39■■□□□ 1.98
CDKN3-208ENST00000555837 TAF1CQ15572 869 aaPredicted RBP27.39■■□□□ 1.98
CDKN3-208ENST00000555837 PATL2C9JE40 543 aaKnown RBP27.38■■□□□ 1.97
CDKN3-208ENST00000555837 TBC1D8O95759 1140 aa27.38■■□□□ 1.97
CDKN3-208ENST00000555837 WDR18Q9BV38 432 aa27.38■■□□□ 1.97
CDKN3-208ENST00000555837 SLC45A1Q9Y2W3 748 aa27.38■■□□□ 1.97
CDKN3-208ENST00000555837 A0A0G2JLL6 359 aaPredicted RBP27.37■■□□□ 1.97
CDKN3-208ENST00000555837 C19orf81C9J6K1 198 aa27.37■■□□□ 1.97
CDKN3-208ENST00000555837 SLC3A2P08195 630 aaKnown RBP27.37■■□□□ 1.97
CDKN3-208ENST00000555837 PLCD1P51178 756 aa27.37■■□□□ 1.97
CDKN3-208ENST00000555837 SLC4A8Q2Y0W8 1093 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms