RNA–Protein interactions for RNA: ENST00000555587.5

RPGRIP1-209, Transcript of RPGR interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene RPGRIP1, Length 2,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-209ENST00000555587 NPM3O75607 178 aaKnown RBP9.77□□□□□ -0.85
RPGRIP1-209ENST00000555587 MFSD14BQ5SR56 506 aa9.77□□□□□ -0.85
RPGRIP1-209ENST00000555587 HHIPL2Q6UWX4 724 aa9.77□□□□□ -0.85
RPGRIP1-209ENST00000555587 NFXL1Q6ZNB6 911 aa9.77□□□□□ -0.85
RPGRIP1-209ENST00000555587 ZSCAN10Q96SZ4 725 aaPredicted RBP9.77□□□□□ -0.85
RPGRIP1-209ENST00000555587 RBM27Q9P2N5 1060 aaKnown RBP9.77□□□□□ -0.85
RPGRIP1-209ENST00000555587 ORC3Q9UBD5 711 aaPredicted RBP9.77□□□□□ -0.85
RPGRIP1-209ENST00000555587 GREB1LQ9C091 1923 aaPredicted RBP9.76□□□□□ -0.85
RPGRIP1-209ENST00000555587 USP17L12C9JPN9 530 aa9.76□□□□□ -0.85
RPGRIP1-209ENST00000555587 USP17L21D6R901 530 aa9.76□□□□□ -0.85
RPGRIP1-209ENST00000555587 FMNL1O95466 1100 aaPredicted RBP9.76□□□□□ -0.85
RPGRIP1-209ENST00000555587 USP5P45974 858 aa9.76□□□□□ -0.85
RPGRIP1-209ENST00000555587 C7orf43Q8WVR3 580 aa9.76□□□□□ -0.85
RPGRIP1-209ENST00000555587 PSDA5PKW4 1024 aaPredicted RBP9.75□□□□□ -0.85
RPGRIP1-209ENST00000555587 GOLGA6L3A6NEY3 463 aa9.75□□□□□ -0.85
RPGRIP1-209ENST00000555587 MINDY4BA8MYZ0 360 aa9.75□□□□□ -0.85
RPGRIP1-209ENST00000555587 FDPSP14324 419 aaKnown RBP9.75□□□□□ -0.85
RPGRIP1-209ENST00000555587 MRE11P49959 708 aa9.75□□□□□ -0.85
RPGRIP1-209ENST00000555587 CCT2P78371 535 aaKnown RBP9.75□□□□□ -0.85
RPGRIP1-209ENST00000555587 NTRK3Q16288 839 aa9.75□□□□□ -0.85
RPGRIP1-209ENST00000555587 RTN1Q16799 776 aa9.75□□□□□ -0.85
RPGRIP1-209ENST00000555587 CHST3Q7LGC8 479 aa9.75□□□□□ -0.85
RPGRIP1-209ENST00000555587 USP48Q86UV5 1035 aa9.75□□□□□ -0.85
RPGRIP1-209ENST00000555587 ZNF654Q8IZM8 581 aa9.75□□□□□ -0.85
RPGRIP1-209ENST00000555587 FBXO18Q8NFZ0 1043 aa9.75□□□□□ -0.85
RPGRIP1-209ENST00000555587 GPT2Q8TD30 523 aa9.75□□□□□ -0.85
RPGRIP1-209ENST00000555587 C8orf76Q96K31 380 aa9.75□□□□□ -0.85
RPGRIP1-209ENST00000555587 TACC3Q9Y6A5 838 aa9.75□□□□□ -0.85
RPGRIP1-209ENST00000555587 MORC2Q9Y6X9 1032 aaPredicted RBP9.75□□□□□ -0.85
RPGRIP1-209ENST00000555587 TNKSO95271 1327 aa9.75□□□□□ -0.85
RPGRIP1-209ENST00000555587 BTDP43251 543 aa9.75□□□□□ -0.85
RPGRIP1-209ENST00000555587 MMP14P50281 582 aa9.75□□□□□ -0.85
RPGRIP1-209ENST00000555587 PPP4R3BQ5MIZ7 849 aa9.75□□□□□ -0.85
RPGRIP1-209ENST00000555587 STRIP1Q5VSL9 837 aa9.75□□□□□ -0.85
RPGRIP1-209ENST00000555587 CATIPQ7Z7H3 387 aa9.75□□□□□ -0.85
RPGRIP1-209ENST00000555587 DGKHQ86XP1 1220 aa9.75□□□□□ -0.85
RPGRIP1-209ENST00000555587 TRIM22Q8IYM9 498 aa9.75□□□□□ -0.85
RPGRIP1-209ENST00000555587 PSMD1Q99460 953 aa9.75□□□□□ -0.85
RPGRIP1-209ENST00000555587 RNF26Q9BY78 433 aaPredicted RBP9.75□□□□□ -0.85
RPGRIP1-209ENST00000555587 NCOA5Q9HCD5 579 aaKnown RBP9.75□□□□□ -0.85
RPGRIP1-209ENST00000555587 IARSP41252 1262 aaKnown RBP9.74□□□□□ -0.85
RPGRIP1-209ENST00000555587 RHBDL3P58872 404 aa9.74□□□□□ -0.85
RPGRIP1-209ENST00000555587 MSL1Q68DK7 614 aa9.74□□□□□ -0.85
RPGRIP1-209ENST00000555587 RTKN2Q8IZC4 609 aa9.74□□□□□ -0.85
RPGRIP1-209ENST00000555587 SH3RF3Q8TEJ3 882 aaPredicted RBP9.74□□□□□ -0.85
RPGRIP1-209ENST00000555587 CNPY2Q9Y2B0 182 aa9.74□□□□□ -0.85
RPGRIP1-209ENST00000555587 GOLGB1Q14789 3259 aaKnown RBP9.74□□□□□ -0.85
RPGRIP1-209ENST00000555587 DEXIO95424 95 aa9.74□□□□□ -0.85
RPGRIP1-209ENST00000555587 DNM1Q05193 864 aaKnown RBP9.74□□□□□ -0.85
RPGRIP1-209ENST00000555587 SSRP1Q08945 709 aaKnown RBP9.74□□□□□ -0.85
RPGRIP1-209ENST00000555587 KIAA2012Q0VF49 1180 aa9.74□□□□□ -0.85
RPGRIP1-209ENST00000555587 CCDC183Q5T5S1 534 aa9.74□□□□□ -0.85
RPGRIP1-209ENST00000555587 IFIT1BQ5T764 474 aaKnown RBP9.74□□□□□ -0.85
RPGRIP1-209ENST00000555587 C16orf86Q6ZW13 317 aa9.74□□□□□ -0.85
RPGRIP1-209ENST00000555587 TEX11Q8IYF3 940 aa9.74□□□□□ -0.85
RPGRIP1-209ENST00000555587 ENAHQ8N8S7 591 aaPredicted RBP9.74□□□□□ -0.85
RPGRIP1-209ENST00000555587 ZNF622Q969S3 477 aaKnown RBP eCLIP9.74□□□□□ -0.85
RPGRIP1-209ENST00000555587 GPHNQ9NQX3 736 aaPredicted RBP9.74□□□□□ -0.85
RPGRIP1-209ENST00000555587 FAM217BQ9NTX9 383 aaPredicted RBP9.74□□□□□ -0.85
RPGRIP1-209ENST00000555587 MCM9Q9NXL9 1143 aa9.74□□□□□ -0.85
RPGRIP1-209ENST00000555587 NAP1L2Q9ULW6 460 aaPredicted RBP9.74□□□□□ -0.85
RPGRIP1-209ENST00000555587 DAGLAQ9Y4D2 1042 aa9.74□□□□□ -0.85
RPGRIP1-209ENST00000555587 YEATS4O95619 227 aa9.73□□□□□ -0.85
RPGRIP1-209ENST00000555587 NOVP48745 357 aa9.73□□□□□ -0.85
RPGRIP1-209ENST00000555587 TRIM29Q14134 588 aa9.73□□□□□ -0.85
RPGRIP1-209ENST00000555587 ZSCAN23Q3MJ62 389 aa9.73□□□□□ -0.85
RPGRIP1-209ENST00000555587 CCDC93Q567U6 631 aa9.73□□□□□ -0.85
RPGRIP1-209ENST00000555587 RRP12Q5JTH9 1297 aaKnown RBP9.73□□□□□ -0.85
RPGRIP1-209ENST00000555587 FANCBQ8NB91 859 aa9.73□□□□□ -0.85
RPGRIP1-209ENST00000555587 DDX11Q96FC9 970 aa9.73□□□□□ -0.85
RPGRIP1-209ENST00000555587 TOMM22Q9NS69 142 aa9.73□□□□□ -0.85
RPGRIP1-209ENST00000555587 RCOR1Q9UKL0 485 aa9.73□□□□□ -0.85
RPGRIP1-209ENST00000555587 FLT1P17948 1338 aa9.73□□□□□ -0.85
RPGRIP1-209ENST00000555587 FER1L6Q2WGJ9 1857 aa9.73□□□□□ -0.85
RPGRIP1-209ENST00000555587 SCN9AQ15858 1988 aa9.73□□□□□ -0.85
RPGRIP1-209ENST00000555587 G3V3G9 751 aa9.73□□□□□ -0.85
RPGRIP1-209ENST00000555587 GNAQP50148 359 aa9.73□□□□□ -0.85
RPGRIP1-209ENST00000555587 GTF2IP78347 998 aa9.73□□□□□ -0.85
RPGRIP1-209ENST00000555587 DCAF8Q5TAQ9 597 aa9.73□□□□□ -0.85
RPGRIP1-209ENST00000555587 FOXD4L5Q5VV16 416 aaPredicted RBP9.73□□□□□ -0.85
RPGRIP1-209ENST00000555587 MICU3Q86XE3 530 aa9.73□□□□□ -0.85
RPGRIP1-209ENST00000555587 LEO1Q8WVC0 666 aaPredicted RBP9.73□□□□□ -0.85
RPGRIP1-209ENST00000555587 FOXD4L4Q8WXT5 416 aaPredicted RBP9.73□□□□□ -0.85
RPGRIP1-209ENST00000555587 TEKT1Q969V4 418 aa9.73□□□□□ -0.85
RPGRIP1-209ENST00000555587 SPATA32Q96LK8 384 aa9.73□□□□□ -0.85
RPGRIP1-209ENST00000555587 ZDHHC15Q96MV8 337 aa9.73□□□□□ -0.85
RPGRIP1-209ENST00000555587 EHD4Q9H223 541 aa9.73□□□□□ -0.85
RPGRIP1-209ENST00000555587 SWAP70Q9UH65 585 aa9.73□□□□□ -0.85
RPGRIP1-209ENST00000555587 RANBP6O60518 1105 aaKnown RBP9.72□□□□□ -0.85
RPGRIP1-209ENST00000555587 XBP1P17861 261 aa9.72□□□□□ -0.85
RPGRIP1-209ENST00000555587 KIF5BP33176 963 aa9.72□□□□□ -0.85
RPGRIP1-209ENST00000555587 TGFB2P61812 414 aa9.72□□□□□ -0.85
RPGRIP1-209ENST00000555587 CAVIN1Q6NZI2 390 aaKnown RBP9.72□□□□□ -0.85
RPGRIP1-209ENST00000555587 TTC6Q86TZ1 520 aa9.72□□□□□ -0.85
RPGRIP1-209ENST00000555587 GPR101Q96P66 508 aaPredicted RBP9.72□□□□□ -0.85
RPGRIP1-209ENST00000555587 LZTS2Q9BRK4 669 aa9.72□□□□□ -0.85
RPGRIP1-209ENST00000555587 ALG1Q9BT22 464 aa9.72□□□□□ -0.85
RPGRIP1-209ENST00000555587 DDX19AQ9NUU7 478 aaKnown RBP9.72□□□□□ -0.85
RPGRIP1-209ENST00000555587 POLR3EQ9NVU0 708 aa9.72□□□□□ -0.85
RPGRIP1-209ENST00000555587 RTEL1Q9NZ71 1219 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms