RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 EFCC1Q9HA90 598 aa14.41□□□□□ -0.1
VRK1-204ENST00000555351 TRIM17Q9Y577 477 aa14.41□□□□□ -0.1
VRK1-204ENST00000555351 FLT1P17948 1338 aa14.41□□□□□ -0.1
VRK1-204ENST00000555351 PDHXO00330 501 aa14.4□□□□□ -0.1
VRK1-204ENST00000555351 CAP2P40123 477 aa14.4□□□□□ -0.1
VRK1-204ENST00000555351 MLLT1Q03111 559 aaPredicted RBP14.4□□□□□ -0.1
VRK1-204ENST00000555351 C17orf99Q6UX52 265 aa14.4□□□□□ -0.1
VRK1-204ENST00000555351 CD99L2Q8TCZ2 262 aa14.4□□□□□ -0.1
VRK1-204ENST00000555351 TGFBRAP1Q8WUH2 860 aa14.4□□□□□ -0.1
VRK1-204ENST00000555351 PTPN22Q9Y2R2 807 aa14.4□□□□□ -0.1
VRK1-204ENST00000555351 ADGRA2Q96PE1 1338 aa14.4□□□□□ -0.1
VRK1-204ENST00000555351 SIPA1L1O43166 1804 aa14.39□□□□□ -0.11
VRK1-204ENST00000555351 ATP5JP18859 108 aa14.39□□□□□ -0.11
VRK1-204ENST00000555351 PRMT2P55345 433 aa14.39□□□□□ -0.11
VRK1-204ENST00000555351 KIF22Q14807 665 aa14.39□□□□□ -0.11
VRK1-204ENST00000555351 GPAT2Q6NUI2 795 aa14.39□□□□□ -0.11
VRK1-204ENST00000555351 MAGEB6Q8N7X4 407 aa14.39□□□□□ -0.11
VRK1-204ENST00000555351 PARK7Q99497 189 aaKnown RBP14.39□□□□□ -0.11
VRK1-204ENST00000555351 LRRCC1Q9C099 1032 aa14.39□□□□□ -0.11
VRK1-204ENST00000555351 ANTXR1Q9H6X2 564 aa14.39□□□□□ -0.11
VRK1-204ENST00000555351 TAOK2Q9UL54 1235 aa14.39□□□□□ -0.11
VRK1-204ENST00000555351 PTPRFP10586 1907 aa14.39□□□□□ -0.11
VRK1-204ENST00000555351 HLA-DOAP06340 250 aa14.38□□□□□ -0.11
VRK1-204ENST00000555351 LACTBP83111 547 aaPredicted RBP14.38□□□□□ -0.11
VRK1-204ENST00000555351 PROCA1Q8NCQ7 364 aaPredicted RBP14.38□□□□□ -0.11
VRK1-204ENST00000555351 ATAD5Q96QE3 1844 aa14.38□□□□□ -0.11
VRK1-204ENST00000555351 USP17L5A8MUK1 530 aa14.37□□□□□ -0.11
VRK1-204ENST00000555351 ASNSP08243 561 aa14.37□□□□□ -0.11
VRK1-204ENST00000555351 MAPKAPK5Q8IW41 473 aa14.37□□□□□ -0.11
VRK1-204ENST00000555351 ZNF280CQ8ND82 737 aa14.37□□□□□ -0.11
VRK1-204ENST00000555351 ARMC5Q96C12 935 aa14.37□□□□□ -0.11
VRK1-204ENST00000555351 RIOK1Q9BRS2 568 aaKnown RBP14.37□□□□□ -0.11
VRK1-204ENST00000555351 WDR18Q9BV38 432 aa14.37□□□□□ -0.11
VRK1-204ENST00000555351 EHD4Q9H223 541 aa14.37□□□□□ -0.11
VRK1-204ENST00000555351 DCTPP1Q9H773 170 aa14.37□□□□□ -0.11
VRK1-204ENST00000555351 AS3MTQ9HBK9 375 aa14.37□□□□□ -0.11
VRK1-204ENST00000555351 LOC285556D6RIA3 1793 aa14.37□□□□□ -0.11
VRK1-204ENST00000555351 APBB1O00213 710 aa14.36□□□□□ -0.11
VRK1-204ENST00000555351 PDE6AP16499 860 aa14.36□□□□□ -0.11
VRK1-204ENST00000555351 DYNLL1P63167 89 aaKnown RBP14.36□□□□□ -0.11
VRK1-204ENST00000555351 SH3D19Q5HYK7 790 aa14.36□□□□□ -0.11
VRK1-204ENST00000555351 SLC9C2Q5TAH2 1124 aa14.36□□□□□ -0.11
VRK1-204ENST00000555351 CRACR2BQ8N4Y2 399 aaPredicted RBP14.36□□□□□ -0.11
VRK1-204ENST00000555351 HAUS7Q99871 368 aa14.36□□□□□ -0.11
VRK1-204ENST00000555351 TRIM34Q9BYJ4 488 aa14.36□□□□□ -0.11
VRK1-204ENST00000555351 AGTPBP1Q9UPW5 1226 aa14.36□□□□□ -0.11
VRK1-204ENST00000555351 MYH1P12882 1939 aa14.35□□□□□ -0.11
VRK1-204ENST00000555351 RBBP6Q7Z6E9 1792 aaKnown RBP14.35□□□□□ -0.11
VRK1-204ENST00000555351 MAGEB6P1A0A0J9YX57 407 aa14.35□□□□□ -0.11
VRK1-204ENST00000555351 TRIM75PA6NK02 468 aa14.35□□□□□ -0.11
VRK1-204ENST00000555351 FAM196BA6NMK8 535 aa14.35□□□□□ -0.11
VRK1-204ENST00000555351 SLURP2P0DP57 97 aa14.35□□□□□ -0.11
VRK1-204ENST00000555351 BCRP11274 1271 aa14.35□□□□□ -0.11
VRK1-204ENST00000555351 USP5P45974 858 aa14.35□□□□□ -0.11
VRK1-204ENST00000555351 PABPC4Q13310 644 aaKnown RBP eCLIP14.35□□□□□ -0.117e-6■■■□□ 16
VRK1-204ENST00000555351 TTC6Q86TZ1 520 aa14.35□□□□□ -0.11
VRK1-204ENST00000555351 MIGA1Q8NAN2 632 aa14.35□□□□□ -0.11
VRK1-204ENST00000555351 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.35□□□□□ -0.11
VRK1-204ENST00000555351 DNAJC18Q9H819 358 aa14.35□□□□□ -0.11
VRK1-204ENST00000555351 PAG1Q9NWQ8 432 aa14.35□□□□□ -0.11
VRK1-204ENST00000555351 PNMA3Q9UL41 463 aa14.35□□□□□ -0.11
VRK1-204ENST00000555351 PALD1Q9ULE6 856 aa14.35□□□□□ -0.11
VRK1-204ENST00000555351 NDUFB9Q9Y6M9 179 aa14.35□□□□□ -0.11
VRK1-204ENST00000555351 DDX60LQ5H9U9 1706 aaKnown RBP14.35□□□□□ -0.11
VRK1-204ENST00000555351 TCRBV5S4A2TA0A5A2 114 aa14.34□□□□□ -0.11
VRK1-204ENST00000555351 GOLIM4O00461 696 aa14.34□□□□□ -0.11
VRK1-204ENST00000555351 HOXD10P28358 340 aa14.34□□□□□ -0.11
VRK1-204ENST00000555351 CAP1Q01518 475 aa14.34□□□□□ -0.11
VRK1-204ENST00000555351 RRP1BQ14684 758 aaKnown RBP14.34□□□□□ -0.11
VRK1-204ENST00000555351 TATDN1Q6P1N9 297 aa14.34□□□□□ -0.11
VRK1-204ENST00000555351 GADL1Q6ZQY3 521 aa14.34□□□□□ -0.11
VRK1-204ENST00000555351 NBPF11Q86T75 865 aa14.34□□□□□ -0.11
VRK1-204ENST00000555351 DNAJC2Q99543 621 aaKnown RBP14.34□□□□□ -0.11
VRK1-204ENST00000555351 CRNKL1Q9BZJ0 848 aaKnown RBP14.34□□□□□ -0.11
VRK1-204ENST00000555351 SERPINB13Q9UIV8 391 aa14.34□□□□□ -0.11
VRK1-204ENST00000555351 C19orf81C9J6K1 198 aa14.33□□□□□ -0.12
VRK1-204ENST00000555351 RRP1P56182 461 aaKnown RBP14.33□□□□□ -0.12
VRK1-204ENST00000555351 SOX10P56693 466 aa14.33□□□□□ -0.12
VRK1-204ENST00000555351 SPP2Q13103 211 aa14.33□□□□□ -0.12
VRK1-204ENST00000555351 AAMPQ13685 434 aa14.33□□□□□ -0.12
VRK1-204ENST00000555351 ZSCAN25Q6NSZ9 544 aa14.33□□□□□ -0.12
VRK1-204ENST00000555351 ECHDC1Q9NTX5 307 aa14.33□□□□□ -0.12
VRK1-204ENST00000555351 CPA4Q9UI42 421 aa14.33□□□□□ -0.12
VRK1-204ENST00000555351 ZNF532Q9HCE3 1301 aa14.33□□□□□ -0.12
VRK1-204ENST00000555351 KCNA4P22459 653 aa14.32□□□□□ -0.12
VRK1-204ENST00000555351 ADD2P35612 726 aa14.32□□□□□ -0.12
VRK1-204ENST00000555351 PSMC4P43686 418 aa14.32□□□□□ -0.12
VRK1-204ENST00000555351 GCLCP48506 637 aaPredicted RBP14.32□□□□□ -0.12
VRK1-204ENST00000555351 BACE1P56817 501 aa14.32□□□□□ -0.12
VRK1-204ENST00000555351 UBE3CQ15386 1083 aa14.32□□□□□ -0.12
VRK1-204ENST00000555351 GPATCH3Q96I76 525 aa14.32□□□□□ -0.12
VRK1-204ENST00000555351 BOLA2Q9H3K6 86 aa14.32□□□□□ -0.12
VRK1-204ENST00000555351 SAP30BPQ9UHR5 308 aaKnown RBP14.32□□□□□ -0.12
VRK1-204ENST00000555351 ZBTB21Q9ULJ3 1066 aa14.32□□□□□ -0.12
VRK1-204ENST00000555351 CYP2C8P10632 490 aa14.31□□□□□ -0.12
VRK1-204ENST00000555351 FCGRTP55899 365 aa14.31□□□□□ -0.12
VRK1-204ENST00000555351 SLC9C1Q4G0N8 1177 aa14.31□□□□□ -0.12
VRK1-204ENST00000555351 SMCR8Q8TEV9 937 aaPredicted RBP14.31□□□□□ -0.12
VRK1-204ENST00000555351 ZNF333Q96JL9 665 aa14.31□□□□□ -0.12
VRK1-204ENST00000555351 TRIM47Q96LD4 638 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms