RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 CYP2D6P10635 497 aa17.01■□□□□ 0.31
CHD8-208ENST00000555301 IREB2P48200 963 aaKnown RBP17.01■□□□□ 0.31
CHD8-208ENST00000555301 MAP3K11Q16584 847 aa17.01■□□□□ 0.31
CHD8-208ENST00000555301 CST9Q5W186 159 aa17.01■□□□□ 0.31
CHD8-208ENST00000555301 MAP4K1Q92918 833 aa17.01■□□□□ 0.31
CHD8-208ENST00000555301 LSG1Q9H089 658 aaKnown RBP17.01■□□□□ 0.31
CHD8-208ENST00000555301 SWAP70Q9UH65 585 aa17.01■□□□□ 0.31
CHD8-208ENST00000555301 U3KPZ7 1027 aaPredicted RBP17.01■□□□□ 0.31
CHD8-208ENST00000555301 SSC5DA1L4H1 1573 aa17.01■□□□□ 0.31
CHD8-208ENST00000555301 CYP2D7A0A087X1C5 515 aa17■□□□□ 0.31
CHD8-208ENST00000555301 UNCXA6NJT0 531 aa17■□□□□ 0.31
CHD8-208ENST00000555301 TMEM88BA6NKF7 163 aa17■□□□□ 0.31
CHD8-208ENST00000555301 ZNF213O14771 459 aa17■□□□□ 0.31
CHD8-208ENST00000555301 PTH1RQ03431 593 aa17■□□□□ 0.31
CHD8-208ENST00000555301 GABPAQ06546 454 aa17■□□□□ 0.31
CHD8-208ENST00000555301 PPARAQ07869 468 aa17■□□□□ 0.31
CHD8-208ENST00000555301 PRKG1Q13976 671 aa17■□□□□ 0.31
CHD8-208ENST00000555301 ZNF287Q9HBT7 754 aa17■□□□□ 0.31
CHD8-208ENST00000555301 ANAPC4Q9UJX5 808 aa17■□□□□ 0.31
CHD8-208ENST00000555301 ANGEL1Q9UNK9 670 aaKnown RBP17■□□□□ 0.31
CHD8-208ENST00000555301 ROBO3Q96MS0 1386 aa17■□□□□ 0.31
CHD8-208ENST00000555301 EPB41L2O43491 1005 aaKnown RBP16.99■□□□□ 0.31
CHD8-208ENST00000555301 USP2O75604 605 aaPredicted RBP16.99■□□□□ 0.31
CHD8-208ENST00000555301 APLP1P51693 650 aa16.99■□□□□ 0.31
CHD8-208ENST00000555301 IMMTQ16891 758 aaKnown RBP16.99■□□□□ 0.31
CHD8-208ENST00000555301 C16orf86Q6ZW13 317 aa16.99■□□□□ 0.31
CHD8-208ENST00000555301 KLRG1Q96E93 195 aa16.99■□□□□ 0.31
CHD8-208ENST00000555301 ZNF112Q9UJU3 913 aa16.99■□□□□ 0.31
CHD8-208ENST00000555301 PDE4BQ07343 736 aa16.98■□□□□ 0.31
CHD8-208ENST00000555301 TATDN1Q6P1N9 297 aa16.98■□□□□ 0.31
CHD8-208ENST00000555301 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.98■□□□□ 0.31
CHD8-208ENST00000555301 WRNIP1Q96S55 665 aa16.98■□□□□ 0.31
CHD8-208ENST00000555301 DNAJC18Q9H819 358 aa16.98■□□□□ 0.31
CHD8-208ENST00000555301 RBM8AQ9Y5S9 174 aaKnown RBP16.98■□□□□ 0.31
CHD8-208ENST00000555301 FOCADQ5VW36 1801 aa16.98■□□□□ 0.31
CHD8-208ENST00000555301 DDX60LQ5H9U9 1706 aaKnown RBP16.97■□□□□ 0.31
CHD8-208ENST00000555301 FAM196BA6NMK8 535 aa16.97■□□□□ 0.31
CHD8-208ENST00000555301 PHF20L1A8MW92 1017 aa16.97■□□□□ 0.31
CHD8-208ENST00000555301 PCP11498 1178 aaKnown RBP16.97■□□□□ 0.31
CHD8-208ENST00000555301 CDK8P49336 464 aa16.97■□□□□ 0.31
CHD8-208ENST00000555301 C1QTNF8P60827 252 aa16.97■□□□□ 0.31
CHD8-208ENST00000555301 MAP3K9P80192 1104 aa16.97■□□□□ 0.31
CHD8-208ENST00000555301 EVX2Q03828 476 aa16.97■□□□□ 0.31
CHD8-208ENST00000555301 ANKRD13AQ8IZ07 590 aa16.97■□□□□ 0.31
CHD8-208ENST00000555301 DYNLL2Q96FJ2 89 aa16.97■□□□□ 0.31
CHD8-208ENST00000555301 RNF41Q9H4P4 317 aaPredicted RBP16.97■□□□□ 0.31
CHD8-208ENST00000555301 MKNK2Q9HBH9 465 aa16.97■□□□□ 0.31
CHD8-208ENST00000555301 CREBZFQ9NS37 354 aa16.97■□□□□ 0.31
CHD8-208ENST00000555301 FZD1Q9UP38 647 aa16.97■□□□□ 0.31
CHD8-208ENST00000555301 CSADQ9Y600 493 aa16.97■□□□□ 0.31
CHD8-208ENST00000555301 UBE2Q2LH0YL09 131 aa16.96■□□□□ 0.31
CHD8-208ENST00000555301 CTNND1O60716 968 aaKnown RBP16.96■□□□□ 0.31
CHD8-208ENST00000555301 SLURP2P0DP57 97 aa16.96■□□□□ 0.31
CHD8-208ENST00000555301 SHMT1P34896 483 aa16.96■□□□□ 0.31
CHD8-208ENST00000555301 HAND2P61296 217 aa16.96■□□□□ 0.31
CHD8-208ENST00000555301 C8orf34Q49A92 452 aa16.96■□□□□ 0.31
CHD8-208ENST00000555301 LDLRAD1Q5T700 205 aa16.96■□□□□ 0.31
CHD8-208ENST00000555301 MOB2Q70IA6 237 aa16.96■□□□□ 0.31
CHD8-208ENST00000555301 SAPCD2Q86UD0 394 aa16.96■□□□□ 0.31
CHD8-208ENST00000555301 GINM1Q9NU53 330 aa16.96■□□□□ 0.31
CHD8-208ENST00000555301 ABT1Q9ULW3 272 aaKnown RBP16.96■□□□□ 0.31
CHD8-208ENST00000555301 TLL2Q9Y6L7 1015 aa16.96■□□□□ 0.31
CHD8-208ENST00000555301 NAV1Q8NEY1 1877 aa16.96■□□□□ 0.31
CHD8-208ENST00000555301 SMIM22K7EJ46 135 aa16.95■□□□□ 0.3
CHD8-208ENST00000555301 CAP2P40123 477 aa16.95■□□□□ 0.3
CHD8-208ENST00000555301 NT5C2P49902 561 aa16.95■□□□□ 0.3
CHD8-208ENST00000555301 HUNKP57058 714 aa16.95■□□□□ 0.3
CHD8-208ENST00000555301 CTDSPL2Q05D32 466 aa16.95■□□□□ 0.3
CHD8-208ENST00000555301 NECTIN1Q15223 517 aa16.95■□□□□ 0.3
CHD8-208ENST00000555301 CERKLQ49MI3 558 aaPredicted RBP16.95■□□□□ 0.3
CHD8-208ENST00000555301 NOL9Q5SY16 702 aaKnown RBP16.95■□□□□ 0.3
CHD8-208ENST00000555301 RNF20Q5VTR2 975 aa16.95■□□□□ 0.3
CHD8-208ENST00000555301 SLC44A5Q8NCS7 719 aa16.95■□□□□ 0.3
CHD8-208ENST00000555301 CCDC17Q96LX7 622 aa16.95■□□□□ 0.3
CHD8-208ENST00000555301 CDK5RAP2Q96SN8 1893 aa16.95■□□□□ 0.3
CHD8-208ENST00000555301 PAPPA2Q9BXP8 1791 aa16.94■□□□□ 0.3
CHD8-208ENST00000555301 CYP21A2P08686 494 aa16.94■□□□□ 0.3
CHD8-208ENST00000555301 FGRP09769 529 aa16.94■□□□□ 0.3
CHD8-208ENST00000555301 INPP5BP32019 993 aa16.94■□□□□ 0.3
CHD8-208ENST00000555301 AKNAD1Q5T1N1 836 aa16.94■□□□□ 0.3
CHD8-208ENST00000555301 MFSD6Q6ZSS7 791 aa16.94■□□□□ 0.3
CHD8-208ENST00000555301 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.94■□□□□ 0.3
CHD8-208ENST00000555301 SCYL3Q8IZE3 742 aa16.94■□□□□ 0.3
CHD8-208ENST00000555301 ZNF444Q8N0Y2 327 aaPredicted RBP16.94■□□□□ 0.3
CHD8-208ENST00000555301 STK11IPQ8N1F8 1099 aa16.94■□□□□ 0.3
CHD8-208ENST00000555301 STAG1Q8WVM7 1258 aa16.94■□□□□ 0.3
CHD8-208ENST00000555301 HHIPL1Q96JK4 782 aa16.94■□□□□ 0.3
CHD8-208ENST00000555301 POLR2AP24928 1970 aaKnown RBP16.93■□□□□ 0.3
CHD8-208ENST00000555301 ASNSP08243 561 aa16.93■□□□□ 0.3
CHD8-208ENST00000555301 VGLL4Q14135 290 aa16.93■□□□□ 0.3
CHD8-208ENST00000555301 CREB3L3Q68CJ9 461 aa16.93■□□□□ 0.3
CHD8-208ENST00000555301 ZKSCAN4Q969J2 545 aaPredicted RBP16.93■□□□□ 0.3
CHD8-208ENST00000555301 CABP5Q9NP86 173 aa16.93■□□□□ 0.3
CHD8-208ENST00000555301 PICK1Q9NRD5 415 aa16.93■□□□□ 0.3
CHD8-208ENST00000555301 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.93■□□□□ 0.3
CHD8-208ENST00000555301 SLC27A2O14975 620 aa16.92■□□□□ 0.3
CHD8-208ENST00000555301 ORC4O43929 436 aa16.92■□□□□ 0.3
CHD8-208ENST00000555301 PRDM1O75626 825 aa16.92■□□□□ 0.3
CHD8-208ENST00000555301 ZKSCAN1P17029 563 aaPredicted RBP16.92■□□□□ 0.3
CHD8-208ENST00000555301 HSPA6P17066 643 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms